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Started by upstream project "BIOFORMATS-test-repo" build number 371 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins1699320746522374603.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_59002_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 11:56:21,367 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 11:56:21,369 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 11:56:21,369 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 11:56:21,370 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 11:56:21,370 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 11:56:21,370 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 11:56:21,370 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 11:56:21,370 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 11:56:21,371 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 11:56:21,371 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 11:56:21,371 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 11:56:21,371 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 11:56:21,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 11:56:21,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 11:56:21,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 11:56:21,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 11:56:21,630 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 11:56:21,630 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 11:56:21,630 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 11:56:21,630 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 11:56:21,631 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 11:56:21,631 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 11:56:21,632 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 261 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-10 11:56:21,642] [main] java.version = 1.8.0_342 [testng] 11:56:21,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 11:56:21,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:56:21,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_11-56-21.log] [testng] 11:56:21,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-10 11:56:21,698] [main] testng.directory = /data [testng] [2025-03-10 11:56:21,698] [main] testng.configDirectory = /config [testng] [2025-03-10 11:56:21,711] [main] testng.multiplier = 1.0 [testng] [2025-03-10 11:56:21,712] [main] testng.in-memory = false [testng] [2025-03-10 11:56:21,712] [main] testng.allow-missing = false [testng] [2025-03-10 11:56:21,712] [main] user.language = fr [testng] [2025-03-10 11:56:21,712] [main] user.country = FR [testng] [2025-03-10 11:56:21,712] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-10 11:57:03,945] [main] ---------------------------------------- [testng] [2025-03-10 11:57:03,945] [main] Total files: 259 [testng] [2025-03-10 11:57:03,946] [main] Scan time: 42.233 s (163 ms/file) [testng] [2025-03-10 11:57:03,946] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-10 12:05:31,050] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 12:05:31,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 12:05:31,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:31,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-10_12-05-31.log] [testng] 12:05:31,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5522075 - End of configuration. [testng] [2025-03-10 12:05:31,795] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 12:05:31,795 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:05:31,795 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:31,796 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-10_12-05-31.log] [testng] 12:05:31,796 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39b66e5 - End of configuration. [testng] [2025-03-10 12:05:31,982] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 12:05:31,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 12:05:31,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:31,983 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-10_12-05-31.log] [testng] 12:05:31,984 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a7ad952 - End of configuration. [testng] [2025-03-10 12:05:34,758] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 12:05:34,758 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 12:05:34,758 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:34,759 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-10_12-05-34.log] [testng] 12:05:34,759 |-INFO in ch.qos.logback.core.sift.SiftProcessor@226ef4ef - End of configuration. [testng] [2025-03-10 12:05:35,359] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 12:05:35,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 12:05:35,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:35,360 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-10_12-05-35.log] [testng] 12:05:35,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@677a3755 - End of configuration. [testng] [2025-03-10 12:05:35,702] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 12:05:35,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 12:05:35,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:35,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-10_12-05-35.log] [testng] 12:05:35,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a2f9115 - End of configuration. [testng] [2025-03-10 12:05:35,944] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 12:05:35,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:05:35,944 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:35,944 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-10_12-05-35.log] [testng] 12:05:35,945 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34569ef2 - End of configuration. [testng] [2025-03-10 12:05:40,837] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 12:05:40,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 12:05:40,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:40,838 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-10_12-05-40.log] [testng] 12:05:40,838 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3168c5a1 - End of configuration. [testng] [2025-03-10 12:05:41,270] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 12:05:41,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 12:05:41,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:41,271 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-10_12-05-41.log] [testng] 12:05:41,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@518a434b - End of configuration. [testng] [2025-03-10 12:05:41,826] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 12:05:41,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 12:05:41,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:41,826 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-10_12-05-41.log] [testng] 12:05:41,827 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26c3b316 - End of configuration. [testng] [2025-03-10 12:05:46,326] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 12:05:46,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:05:46,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:46,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-10_12-05-46.log] [testng] 12:05:46,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10a6e5e0 - End of configuration. [testng] [2025-03-10 12:05:46,598] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 12:05:46,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:05:46,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:05:46,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-10_12-05-46.log] [testng] 12:05:46,599 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3349a005 - End of configuration. [testng] [2025-03-10 12:05:51,034] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2025-03-10 12:05:51,135] [pool-1-thread-2] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2025-03-10 12:05:51,782] [pool-1-thread-8] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2025-03-10 12:05:53,801] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oif: [testng] [2025-03-10 12:05:57,702] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2025-03-10 12:05:58,216] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2025-03-10 12:05:59,351] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2025-03-10 12:06:00,669] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2025-03-10 12:06:02,082] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2025-03-10 12:06:03,587] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2025-03-10 12:06:05,444] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2025-03-10 12:06:43,121] [pool-1-thread-6] Initializing /data/glen/simulstack.oib: [testng] [2025-03-10 12:06:43,743] [pool-1-thread-3] Initializing /data/molly/11OCT6.OIF: [testng] [2025-03-10 12:06:52,950] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2025-03-10 12:06:53,477] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2025-03-10 12:06:56,489] [pool-1-thread-6] Initializing /data/glen/singleseqline.oib: [testng] [2025-03-10 12:06:56,981] [pool-1-thread-2] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2025-03-10 12:06:57,833] [pool-1-thread-5] Initializing /data/monica/Image0056.oif: [testng] [2025-03-10 12:06:58,383] [pool-1-thread-12] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2025-03-10 12:07:00,546] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib: [testng] [2025-03-10 12:07:01,646] [pool-1-thread-12] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2025-03-10 12:07:07,595] [pool-1-thread-6] Initializing /data/brian/PA-GFP-3.oib: [testng] [2025-03-10 12:07:08,279] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2025-03-10 12:07:12,312] [pool-1-thread-6] Initializing /data/glen/111407.oif: [testng] [2025-03-10 12:07:14,491] [pool-1-thread-2] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2025-03-10 12:07:31,593] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oif: [testng] [2025-03-10 12:07:32,295] [pool-1-thread-5] Initializing /data/glen/notsaturated.oif: [testng] [2025-03-10 12:08:11,839] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2025-03-10 12:08:16,484] [pool-1-thread-12] Initializing /data/brian/CFP-GFP2.oib: [testng] [2025-03-10 12:08:20,545] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2025-03-10 12:08:24,371] [pool-1-thread-12] Initializing /data/glen/Image0002.oif: [testng] [2025-03-10 12:11:53,518] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oib: [testng] [2025-03-10 12:11:57,017] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2025-03-10 12:12:01,897] [pool-1-thread-8] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2025-03-10 12:13:08,291] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2025-03-10 12:13:13,698] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2025-03-10 12:13:30,934] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2025-03-10 12:13:57,487] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2025-03-10 12:13:59,040] [pool-1-thread-5] Initializing /data/tom/zseries-test.oib: [testng] [2025-03-10 12:14:06,225] [pool-1-thread-5] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2025-03-10 12:14:10,978] [pool-1-thread-5] Initializing /data/yasunori/series_1.oib: [testng] [2025-03-10 12:14:15,754] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2025-03-10 12:14:20,809] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2025-03-10 12:14:22,562] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2025-03-10 12:14:25,045] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2025-03-10 12:14:28,346] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2025-03-10 12:14:31,294] [pool-1-thread-5] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2025-03-10 12:14:35,819] [pool-1-thread-5] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2025-03-10 12:15:31,706] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib: [testng] [2025-03-10 12:15:36,120] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] [2025-03-10 12:16:31,676] [pool-1-thread-8] Initializing /data/molly/11OCT2.OIF: [testng] [2025-03-10 12:16:49,174] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2025-03-10 12:16:54,014] [pool-1-thread-5] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2025-03-10 12:17:15,631] [pool-1-thread-5] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2025-03-10 12:17:42,919] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2025-03-10 12:17:48,115] [pool-1-thread-5] Initializing /data/brian/lambda02nm.oib: [testng] [2025-03-10 12:17:53,085] [pool-1-thread-5] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2025-03-10 12:18:00,910] [pool-1-thread-5] Initializing /data/karl/Image0009.oib: [testng] [2025-03-10 12:18:05,903] [pool-1-thread-5] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2025-03-10 12:18:12,843] [pool-1-thread-5] Initializing /data/glen/4205basal106072.oif: [testng] [2025-03-10 12:18:34,141] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2025-03-10 12:18:39,582] [pool-1-thread-6] Initializing /data/glen/seqlinestack.oib: [testng] [2025-03-10 12:18:46,089] [pool-1-thread-6] Initializing /data/glen/singlesimul.oib: [testng] [2025-03-10 12:18:50,944] [pool-1-thread-6] Initializing /data/molly/11OCT9.OIF: [testng] [2025-03-10 12:19:21,129] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2025-03-10 12:19:29,347] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2025-03-10 12:19:34,662] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2025-03-10 12:19:40,849] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2025-03-10 12:19:46,563] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: [testng] [2025-03-10 12:19:52,915] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2025-03-10 12:19:57,751] [pool-1-thread-1] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2025-03-10 12:20:02,343] [pool-1-thread-1] Initializing /data/simon/never_worked.oib: [testng] [2025-03-10 12:20:06,836] [pool-1-thread-1] Initializing /data/johannes/step1.bmp: [testng] [2025-03-10 12:20:08,951] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2025-03-10 12:20:15,002] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib: [testng] [2025-03-10 12:20:20,636] [pool-1-thread-1] Initializing /data/stefan/cytosol_03e.oib: [testng] [2025-03-10 12:20:28,647] [pool-1-thread-1] Initializing /data/molly/11OCT8.OIF: [testng] [2025-03-10 12:21:04,473] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2025-03-10 12:21:06,872] [pool-1-thread-4] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2025-03-10 12:21:11,613] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2025-03-10 12:21:14,554] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] [2025-03-10 12:21:19,102] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif: [testng] [2025-03-10 12:21:21,815] [pool-1-thread-4] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2025-03-10 12:21:28,121] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2025-03-10 12:21:35,290] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2025-03-10 12:21:41,901] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2025-03-10 12:21:48,630] [pool-1-thread-4] Initializing /data/yoshihito/XY.oif: [testng] [2025-03-10 12:22:19,515] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] [2025-03-10 12:23:59,304] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2025-03-10 12:24:05,841] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2025-03-10 12:24:11,650] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2025-03-10 12:24:19,799] [pool-1-thread-7] Initializing /data/molly/11OCT7.OIF: [testng] [2025-03-10 12:24:38,197] [pool-1-thread-12] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2025-03-10 12:24:44,775] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2025-03-10 12:25:06,241] [pool-1-thread-2] Initializing /data/allan/62909#1.oib: [testng] [2025-03-10 12:25:11,542] [pool-1-thread-2] Initializing /data/molly/11OCT11.OIF: [testng] [2025-03-10 12:26:55,700] [pool-1-thread-3] Initializing /data/glen/simulstack.oif: [testng] [2025-03-10 12:27:34,049] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2025-03-10 12:27:41,189] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2025-03-10 12:29:55,112] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2025-03-10 12:29:59,399] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2025-03-10 12:30:15,622] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2025-03-10 12:30:20,700] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2025-03-10 12:30:45,954] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2025-03-10 12:32:00,597] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2025-03-10 12:35:59,424] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2025-03-10 12:36:08,326] [pool-1-thread-12] Initializing /data/qa-17748/Image0098.oib: [testng] [2025-03-10 12:36:15,269] [pool-1-thread-12] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2025-03-10 12:36:23,431] [pool-1-thread-12] Initializing /data/tom/RGB-1.avi: [testng] [2025-03-10 12:36:28,226] [pool-1-thread-12] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2025-03-10 12:36:37,342] [pool-1-thread-12] Initializing /data/brian/Kaede15.oib: [testng] [2025-03-10 12:36:46,810] [pool-1-thread-12] Initializing /data/stefan/cytosol_08b.oif: [testng] [2025-03-10 12:43:05,485] [pool-1-thread-3] Initializing /data/glen/Null file/test change.oif: [testng] [2025-03-10 12:43:41,934] [pool-1-thread-3] Initializing /data/yoshihito/XY.oib: [testng] [2025-03-10 12:43:46,369] [pool-1-thread-3] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2025-03-10 12:44:23,809] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2025-03-10 12:44:28,641] [pool-1-thread-1] Initializing /data/johannes/step4.bmp: [testng] [2025-03-10 12:44:31,065] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] [2025-03-10 12:44:33,592] [pool-1-thread-1] Initializing /data/simon/used_to_work.oib: [testng] [2025-03-10 12:44:39,845] [pool-1-thread-1] Initializing /data/johannes/step3.bmp: [testng] [2025-03-10 12:44:42,321] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2025-03-10 12:44:47,060] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2025-03-10 12:45:00,706] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2025-03-10 12:45:02,578] [pool-1-thread-7] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2025-03-10 12:45:06,203] [pool-1-thread-5] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2025-03-10 12:45:44,611] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2025-03-10 12:45:46,684] [pool-1-thread-1] Initializing /data/jae/Image0001.oib: [testng] [2025-03-10 12:45:51,361] [pool-1-thread-7] Initializing /data/glen/singlesimul.oif: [testng] [2025-03-10 12:45:52,733] [pool-1-thread-1] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2025-03-10 12:46:37,859] [pool-1-thread-7] Initializing /data/marc/V0606L.oib: [testng] [2025-03-10 12:46:53,655] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2025-03-10 12:47:00,873] [pool-1-thread-7] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 13:57:22,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 13:57:22,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:57:22,318 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-10_13-57-22.log] [testng] 13:57:22,318 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7687535 - End of configuration. [testng] 14:10:40,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 14:10:40,310 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:10:40,311 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_14-10-40.log] [testng] 14:10:40,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33d95295 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 134 minutes 22 seconds Finished: SUCCESS