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Started by upstream project "BIOFORMATS-test-repo" build number 371 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10 [BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins4443009086233342140.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_59089_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 15:01:51,014 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 15:01:51,015 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 15:01:51,015 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 15:01:51,016 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 15:01:51,016 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 15:01:51,017 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 15:01:51,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 15:01:51,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 15:01:51,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 15:01:51,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 15:01:51,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 15:01:51,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 15:01:51,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 15:01:51,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 15:01:51,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 15:01:51,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 15:01:51,276 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 15:01:51,276 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 15:01:51,276 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 15:01:51,277 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 15:01:51,277 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 15:01:51,278 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 15:01:51,278 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 261 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-10 15:01:51,288] [main] java.version = 1.8.0_342 [testng] 15:01:51,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 15:01:51,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:01:51,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_15-01-51.log] [testng] 15:01:51,339 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-10 15:01:51,341] [main] testng.directory = /data [testng] [2025-03-10 15:01:51,341] [main] testng.configDirectory = /config [testng] [2025-03-10 15:01:51,353] [main] testng.multiplier = 1.0 [testng] [2025-03-10 15:01:51,353] [main] testng.in-memory = false [testng] [2025-03-10 15:01:51,353] [main] testng.allow-missing = false [testng] [2025-03-10 15:01:51,353] [main] user.language = fr [testng] [2025-03-10 15:01:51,354] [main] user.country = FR [testng] [2025-03-10 15:01:51,354] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-10 15:06:25,300] [main] ---------------------------------------- [testng] [2025-03-10 15:06:25,301] [main] Total files: 15735 [testng] [2025-03-10 15:06:25,301] [main] Scan time: 273.946 s (17 ms/file) [testng] [2025-03-10 15:06:25,301] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-10 15:09:41,883] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 15:09:41,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 15:09:41,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:41,885 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-10_15-09-41.log] [testng] 15:09:41,885 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2944c450 - End of configuration. [testng] [2025-03-10 15:09:43,123] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 15:09:43,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 15:09:43,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:43,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-10_15-09-43.log] [testng] 15:09:43,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c86a1ec - End of configuration. [testng] [2025-03-10 15:09:44,231] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 15:09:44,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 15:09:44,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:44,232 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-10_15-09-44.log] [testng] 15:09:44,233 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c892fd0 - End of configuration. [testng] [2025-03-10 15:09:45,482] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 15:09:45,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 15:09:45,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:45,483 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-10_15-09-45.log] [testng] 15:09:45,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2dab6ee8 - End of configuration. [testng] [2025-03-10 15:09:46,703] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 15:09:46,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 15:09:46,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:46,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-10_15-09-46.log] [testng] 15:09:46,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34785031 - End of configuration. [testng] [2025-03-10 15:09:47,919] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 15:09:47,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 15:09:47,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:47,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-10_15-09-47.log] [testng] 15:09:47,920 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bede0b6 - End of configuration. [testng] [2025-03-10 15:09:49,176] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 15:09:49,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 15:09:49,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:49,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-10_15-09-49.log] [testng] 15:09:49,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59fae497 - End of configuration. [testng] [2025-03-10 15:09:50,428] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 15:09:50,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 15:09:50,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:50,429 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-10_15-09-50.log] [testng] 15:09:50,429 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ed2a34a - End of configuration. [testng] [2025-03-10 15:09:51,704] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 15:09:51,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 15:09:51,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:51,705 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-10_15-09-51.log] [testng] 15:09:51,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@600d2ef1 - End of configuration. [testng] [2025-03-10 15:09:53,717] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 15:09:53,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 15:09:53,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:53,718 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-10_15-09-53.log] [testng] 15:09:53,718 |-INFO in ch.qos.logback.core.sift.SiftProcessor@151bd292 - End of configuration. [testng] [2025-03-10 15:09:55,140] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 15:09:55,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 15:09:55,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:55,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-10_15-09-55.log] [testng] 15:09:55,142 |-INFO in ch.qos.logback.core.sift.SiftProcessor@555d30c7 - End of configuration. [testng] [2025-03-10 15:09:56,373] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 15:09:56,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 15:09:56,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:56,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-10_15-09-56.log] [testng] 15:09:56,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@243d28a6 - End of configuration. [testng] [2025-03-10 15:10:26,676] [pool-1-thread-1] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-03-10 15:10:28,301] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-03-10 15:10:30,079] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-03-10 15:10:32,250] [pool-1-thread-3] Initializing /data/scott/Slide133-04.tif: [testng] [2025-03-10 15:11:00,836] [pool-1-thread-1] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-03-10 15:11:07,798] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-03-10 15:11:37,449] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-03-10 15:11:50,125] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-03-10 15:11:55,719] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-03-10 15:14:00,401] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-03-10 15:14:39,585] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2025-03-10 15:14:44,097] [pool-1-thread-8] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-03-10 15:14:48,463] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-03-10 15:15:17,773] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-03-10 15:15:23,561] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-03-10 15:15:50,819] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-03-10 15:15:57,961] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-03-10 15:16:13,273] [pool-1-thread-10] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-03-10 15:16:25,909] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-03-10 15:18:18,784] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2025-03-10 15:18:48,835] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-03-10 15:18:59,824] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-03-10 15:19:20,372] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-03-10 15:19:36,151] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-03-10 15:19:38,478] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-03-10 15:20:59,774] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-03-10 15:23:22,254] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2025-03-10 15:25:16,466] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-03-10 15:26:43,572] [pool-1-thread-1] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-03-10 15:27:12,133] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-03-10 15:28:41,989] [pool-1-thread-8] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-03-10 15:29:12,445] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-03-10 15:29:21,833] [pool-1-thread-8] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-03-10 15:29:57,091] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-03-10 15:30:55,145] [pool-1-thread-7] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-03-10 15:31:39,255] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2025-03-10 15:32:05,579] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-03-10 15:32:09,610] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-03-10 15:32:11,966] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-03-10 15:32:41,165] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-03-10 15:37:17,083] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-03-10 15:37:57,836] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-03-10 15:41:32,997] [pool-1-thread-6] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-03-10 15:41:52,001] [pool-1-thread-5] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-03-10 15:42:23,361] [pool-1-thread-2] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-03-10 15:42:45,433] [pool-1-thread-4] Initializing /data/converted/dietmar/137.tif: [testng] [2025-03-10 15:42:57,400] [pool-1-thread-5] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-03-10 15:43:11,233] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-03-10 15:46:29,205] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-03-10 15:50:54,205] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-03-10 15:52:00,745] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-03-10 15:53:46,458] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-03-10 15:56:01,027] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-03-10 15:56:36,392] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-03-10 15:57:49,800] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2025-03-10 16:00:32,644] [pool-1-thread-1] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-03-10 16:02:13,673] [pool-1-thread-3] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-03-10 16:02:41,069] [pool-1-thread-2] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2025-03-10 16:04:19,597] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-03-10 16:06:27,212] [pool-1-thread-2] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-03-10 16:10:10,460] [pool-1-thread-10] Initializing /data/converted/michel/c.tif: [testng] [2025-03-10 16:10:21,795] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-03-10 16:11:24,158] [pool-1-thread-10] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-03-10 16:12:14,504] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-03-10 16:12:30,969] [pool-1-thread-10] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-03-10 16:12:35,410] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-03-10 16:13:48,957] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-03-10 16:14:14,630] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-03-10 16:14:36,996] [pool-1-thread-3] Initializing /data/converted/michel/e.tif: [testng] [2025-03-10 16:15:46,635] [pool-1-thread-9] Initializing /data/converted/nicolas/image.tif: [testng] [2025-03-10 16:16:40,793] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-03-10 16:16:45,319] [pool-1-thread-9] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-03-10 16:17:59,457] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-03-10 16:19:09,428] [pool-1-thread-1] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-03-10 16:24:23,007] [pool-1-thread-1] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-03-10 16:25:28,965] [pool-1-thread-1] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-03-10 16:27:19,252] [pool-1-thread-2] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-03-10 16:27:22,290] [pool-1-thread-11] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-03-10 16:27:33,268] [pool-1-thread-1] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-03-10 16:28:25,828] [pool-1-thread-2] Initializing /data/converted/michel/a.tif: [testng] [2025-03-10 16:28:35,166] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-03-10 16:28:57,229] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-03-10 16:29:20,246] [pool-1-thread-2] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-03-10 16:29:29,037] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-03-10 16:29:53,722] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-03-10 16:30:09,245] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-03-10 16:30:16,485] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-03-10 16:31:02,236] [pool-1-thread-8] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-03-10 16:31:06,008] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-03-10 16:32:03,736] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-03-10 16:32:17,162] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-03-10 16:33:13,399] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-03-10 16:35:08,009] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-03-10 16:35:38,348] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-03-10 16:43:53,143] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2025-03-10 16:44:14,726] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] 16:44:42,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 16:44:42,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:44:42,269 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-10_16-44-42.log] [testng] 16:44:42,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a5178e7 - End of configuration. [testng] [2025-03-10 16:45:12,109] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-03-10 16:45:47,320] [pool-1-thread-2] Initializing /data/converted/michel/d.tif: [testng] [2025-03-10 16:46:07,427] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-03-10 16:46:34,942] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-03-10 16:46:52,974] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-03-10 16:47:08,849] [pool-1-thread-1] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-03-10 16:47:36,080] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2025-03-10 16:48:16,761] [pool-1-thread-5] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-03-10 16:48:30,034] [pool-1-thread-10] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-03-10 16:48:38,052] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-03-10 16:49:19,939] [pool-1-thread-8] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-03-10 16:49:42,734] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2025-03-10 16:49:52,179] [pool-1-thread-4] Initializing /data/scott/Slide133-08.tif: [testng] [2025-03-10 16:50:36,002] [pool-1-thread-11] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-03-10 16:50:51,333] [pool-1-thread-4] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-03-10 16:51:14,641] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-03-10 16:52:01,488] [pool-1-thread-4] Initializing /data/converted/lior/live+cf5b.tif: [testng] 17:54:03,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 17:54:03,324 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:54:03,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-10_17-54-03.log] [testng] 17:54:03,326 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18e0ab1b - End of configuration. [testng] 17:58:02,765 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 17:58:02,765 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:58:02,766 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-10_17-58-02.log] [testng] 17:58:02,767 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79059313 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 176 minutes 16 seconds Finished: SUCCESS