Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 375
originally caused by:
 Started by upstream project "Trigger" build number 398
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins8324645859071290087.sh
+ '[' metamorph = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_59383_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 02:08:35,910 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 02:08:35,911 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
   [testng] 02:08:35,911 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:08:35,912 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 02:08:35,913 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 02:08:35,913 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 02:08:35,913 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 02:08:35,913 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:08:35,914 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 02:08:35,914 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 02:08:35,914 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 02:08:35,915 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 02:08:36,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 02:08:36,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 02:08:36,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 02:08:36,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 02:08:36,092 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 02:08:36,092 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 02:08:36,093 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 02:08:36,093 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 02:08:36,093 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
   [testng] 02:08:36,094 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
   [testng] 02:08:36,094 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 180 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-03-12 02:08:36,102] [main] java.version = 17.0.2
   [testng] 02:08:36,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:08:36,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:08:36,145 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-12_02-08-36.log]
   [testng] 02:08:36,146 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
   [testng] [2025-03-12 02:08:36,148] [main] testng.directory = /data
   [testng] [2025-03-12 02:08:36,149] [main] testng.configDirectory = /config
   [testng] [2025-03-12 02:08:36,157] [main] testng.multiplier = 1.0
   [testng] [2025-03-12 02:08:36,158] [main] testng.in-memory = false
   [testng] [2025-03-12 02:08:36,158] [main] testng.allow-missing = false
   [testng] [2025-03-12 02:08:36,158] [main] user.language = en
   [testng] [2025-03-12 02:08:36,158] [main] user.country = ${user.country}
   [testng] [2025-03-12 02:08:36,158] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2025-03-12 02:31:48,848] [main] ----------------------------------------
   [testng] [2025-03-12 02:31:48,848] [main] Total files: 14121
   [testng] [2025-03-12 02:31:48,848] [main] Scan time: 1392.69 s (98 ms/file)
   [testng] [2025-03-12 02:31:48,849] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 261 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-03-12 03:00:15,532] [pool-1-thread-1] Initializing /data/qa-30870/220209_posit5.tif: 
   [testng] 03:00:15,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:00:15,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:15,533 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-12_03-00-15.log]
   [testng] 03:00:15,534 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2509155e - End of configuration.
   [testng] [2025-03-12 03:00:16,637] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w2Filter FITC.TIF: 
   [testng] 03:00:16,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:00:16,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:16,638 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-12_03-00-16.log]
   [testng] 03:00:16,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@604fc004 - End of configuration.
   [testng] [2025-03-12 03:00:17,857] [pool-1-thread-11] Initializing /data/jmuhlich/rgb_w1_s1_t1.TIF: 
   [testng] 03:00:17,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:00:17,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:17,858 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-12_03-00-17.log]
   [testng] 03:00:17,858 |-INFO in ch.qos.logback.core.sift.SiftProcessor@635c5e5d - End of configuration.
   [testng] [2025-03-12 03:00:18,980] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w3Filter TRITC.TIF: 
   [testng] 03:00:18,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:00:18,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:18,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-12_03-00-18.log]
   [testng] 03:00:18,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fb86c3a - End of configuration.
   [testng] [2025-03-12 03:00:20,053] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish3_w1FRET_s1_t1.TIF: 
   [testng] 03:00:20,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:00:20,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:20,054 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-12_03-00-20.log]
   [testng] 03:00:20,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@612450ed - End of configuration.
   [testng] [2025-03-12 03:00:31,382] [pool-1-thread-8] Initializing /data/bill/OX218B3/OX218B3_w1488nm- 30-_t1.STK: 
   [testng] 03:00:31,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:00:31,382 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:31,383 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-12_03-00-31.log]
   [testng] 03:00:31,383 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d2ea886 - End of configuration.
   [testng] [2025-03-12 03:00:33,925] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF: 
   [testng] 03:00:33,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:00:33,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:33,926 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-12_03-00-33.log]
   [testng] 03:00:33,926 |-INFO in ch.qos.logback.core.sift.SiftProcessor@788e3da2 - End of configuration.
   [testng] [2025-03-12 03:00:35,783] [pool-1-thread-7] Used files list does not include base file
   [testng] [2025-03-12 03:00:35,785] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] 03:00:35,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:00:35,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:35,786 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-12_03-00-35.log]
   [testng] 03:00:35,786 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39ef1869 - End of configuration.
   [testng] [2025-03-12 03:00:39,390] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish5_w1FRET_s1_t1.TIF: 
   [testng] 03:00:39,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:00:39,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:39,391 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-12_03-00-39.log]
   [testng] 03:00:39,391 |-INFO in ch.qos.logback.core.sift.SiftProcessor@151c9cc4 - End of configuration.
   [testng] [2025-03-12 03:00:46,612] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF: 
   [testng] 03:00:46,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:00:46,612 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:46,613 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-12_03-00-46.log]
   [testng] 03:00:46,613 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a9e2a45 - End of configuration.
   [testng] [2025-03-12 03:00:48,487] [pool-1-thread-4] Used files list does not include base file
   [testng] [2025-03-12 03:00:48,489] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif: 
   [testng] 03:00:48,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:00:48,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:48,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-12_03-00-48.log]
   [testng] 03:00:48,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30b97072 - End of configuration.
   [testng] [2025-03-12 03:00:49,708] [pool-1-thread-3] Used files list does not include base file
   [testng] [2025-03-12 03:00:49,710] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine-2.tif: 
   [testng] 03:00:49,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:00:49,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:00:49,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-12_03-00-49.log]
   [testng] 03:00:49,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f9b8fb5 - End of configuration.
   [testng] [2025-03-12 03:01:01,506] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:01:06,176] [pool-1-thread-10] Initializing /data/grant/XYZCT_Image_w1FITC_t1.STK: 
   [testng] [2025-03-12 03:01:07,955] [pool-1-thread-12] Initializing /data/chris/test2_w2_s1_t1.stk: 
   [testng] [2025-03-12 03:01:09,494] [pool-1-thread-1] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk: 
   [testng] [2025-03-12 03:01:16,177] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:01:24,100] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish10_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:01:37,017] [pool-1-thread-1] Initializing /data/tristan/data IJM/tl_ z/MDA_TL_z_t1.TIF: 
   [testng] [2025-03-12 03:01:39,134] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1A_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:02:12,900] [pool-1-thread-10] Initializing /data/mike/TEST 1_7_w2EN GFP_s1_t61.STK: 
   [testng] [2025-03-12 03:02:14,506] [pool-1-thread-1] Initializing /data/qa-16915/m-01-561.ome.tif: 
   [testng] [2025-03-12 03:02:26,501] [pool-1-thread-1] Initializing /data/josh/2101to600e.stk: 
   [testng] [2025-03-12 03:02:35,718] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 03:02:46,336] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:02:51,132] [pool-1-thread-4] Initializing /data/cumol-test-series/23.001: 
   [testng] [2025-03-12 03:02:54,652] [pool-1-thread-10] Initializing /data/josh/2101to400bstk.stk: 
   [testng] [2025-03-12 03:04:10,731] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w3Filter TRITC.jpg: 
   [testng] [2025-03-12 03:04:15,280] [pool-1-thread-8] Initializing /data/chris/exp1_w1CSU GREEN_s3_t002.stk: 
   [testng] [2025-03-12 03:04:18,498] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish4_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:04:31,475] [pool-1-thread-1] Initializing /data/chris-de-graffenried/ND C4 488 PLK 5682_w1sRFP.stk: 
   [testng] [2025-03-12 03:04:40,627] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w2Filter FITC.TIF: 
   [testng] [2025-03-12 03:04:50,959] [pool-1-thread-8] Initializing /data/andressa/RPE/Sparse/Collagen/Color Combine.tif: 
   [testng] [2025-03-12 03:05:03,582] [pool-1-thread-8] Initializing /data/jae/RGB_s34.tif: 
   [testng] [2025-03-12 03:05:07,899] [pool-1-thread-1] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t2.TIF: 
   [testng] [2025-03-12 03:05:10,538] [pool-1-thread-1] Used files list does not include base file
   [testng] [2025-03-12 03:05:23,896] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:06:41,395] [pool-1-thread-1] Initializing /data/ascb/mt prc1 kif4.tif: 
   [testng] [2025-03-12 03:06:56,058] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.TIF: 
   [testng] [2025-03-12 03:07:11,084] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish4_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:09:04,615] [pool-1-thread-10] Initializing /data/qa-16915/m-01.tif: 
   [testng] [2025-03-12 03:09:19,638] [pool-1-thread-10] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2_001_w1DUAL 491-561_t1.TIF: 
   [testng] [2025-03-12 03:09:51,017] [pool-1-thread-6] Initializing /data/chris/Stream-2(partial).stk: 
   [testng] [2025-03-12 03:10:07,988] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:10:35,569] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:10:41,686] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:10:51,535] [pool-1-thread-11] Initializing /data/samples/test-plate/test_s10_t1.tif: 
   [testng] [2025-03-12 03:12:46,557] [pool-1-thread-7] Initializing /data/ascb/mt aim.tif: 
   [testng] [2025-03-12 03:13:02,514] [pool-1-thread-7] Initializing /data/josh/EditedMovies/2101to600b.stk: 
   [testng] [2025-03-12 03:14:35,644] [pool-1-thread-7] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w2Laser4914BD4BP_OverView.tif: 
   [testng] [2025-03-12 03:14:37,577] [pool-1-thread-7] Used files list does not include base file
   [testng] [2025-03-12 03:15:05,775] [pool-1-thread-7] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w1Laser4054BD4BP_OverView.tif: 
   [testng] [2025-03-12 03:15:08,676] [pool-1-thread-7] Used files list does not include base file
   [testng] [2025-03-12 03:15:37,174] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:16:21,015] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish4_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:18:21,728] [pool-1-thread-1] Initializing /data/jcb/201008090/Color Combine.stk: 
   [testng] [2025-03-12 03:18:37,903] [pool-1-thread-1] Initializing /data/chris-de-graffenried/2011-05-30/ND C4 488 PLK 5682_w1sRFP.stk: 
   [testng] [2025-03-12 03:19:25,761] [pool-1-thread-1] Initializing /data/sebastien-besson/002/120119_VimMito_002_w1DIC_t1.TIF: 
   [testng] [2025-03-12 03:21:25,200] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:21:53,673] [pool-1-thread-2] Initializing /data/hms/HCT116_w1Phase FITC_s7_t1.TIF: 
   [testng] [2025-03-12 03:21:56,433] [pool-1-thread-6] Initializing /data/jerome/deconv.STK: 
   [testng] [2025-03-12 03:22:08,675] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:22:34,843] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:26:50,344] [pool-1-thread-5] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t1.TIF: 
   [testng] [2025-03-12 03:26:54,388] [pool-1-thread-5] Used files list does not include base file
   [testng] [2025-03-12 03:28:48,167] [pool-1-thread-5] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c1s1t11_Laser4054BD4BP.stk: 
   [testng] [2025-03-12 03:28:50,967] [pool-1-thread-5] Used files list does not include base file
   [testng] [2025-03-12 03:29:53,105] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish2_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:32:06,856] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s1t11_w1Laser4054BD4BP.tif: 
   [testng] [2025-03-12 03:32:35,622] [pool-1-thread-10] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 03:32:57,988] [pool-1-thread-6] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t1.TIF: 
   [testng] [2025-03-12 03:33:01,331] [pool-1-thread-6] Used files list does not include base file
   [testng] [2025-03-12 03:33:12,840] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:33:27,999] [pool-1-thread-2] Initializing /data/samples/10xcalib.stk: 
   [testng] [2025-03-12 03:33:42,549] [pool-1-thread-2] Initializing /data/pang/z-stack/Z Series.tif: 
   [testng] [2025-03-12 03:33:56,161] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR5_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:34:58,834] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w2Filter FITC.TIF: 
   [testng] [2025-03-12 03:35:11,922] [pool-1-thread-6] Initializing /data/andressa/RPE/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 03:35:49,138] [pool-1-thread-6] Initializing /data/josh/EditedMovies/2101to400b.stk: 
   [testng] [2025-03-12 03:39:05,567] [pool-1-thread-6] Initializing /data/qa-16915/m-04-488.tif: 
   [testng] [2025-03-12 03:39:20,781] [pool-1-thread-6] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t1.TIF: 
   [testng] [2025-03-12 03:39:24,362] [pool-1-thread-6] Used files list does not include base file
   [testng] [2025-03-12 03:41:18,658] [pool-1-thread-6] Initializing /data/ascb/C1  Stack.stk: 
   [testng] [2025-03-12 03:41:36,454] [pool-1-thread-6] Initializing /data/chris/exp1_w2CSU RED_s3_t001.stk: 
   [testng] [2025-03-12 03:41:50,859] [pool-1-thread-6] Initializing /data/ascb/RNA dye MT.tif: 
   [testng] [2025-03-12 03:42:08,371] [pool-1-thread-6] Initializing /data/heiko/sample_3x3.stk: 
   [testng] [2025-03-12 03:42:25,376] [pool-1-thread-6] Initializing /data/bill/FromBillM_New_MM_MDAdata/RWeD62u7dF1Mom1_w1CelegansDIC 100x_t1.TIF: 
   [testng] [2025-03-12 03:44:09,548] [pool-1-thread-6] Initializing /data/david/tl4.tif: 
   [testng] [2025-03-12 03:44:23,084] [pool-1-thread-10] Initializing /data/aaron/metamorph.stk: 
   [testng] [2025-03-12 03:44:32,833] [pool-1-thread-6] Initializing /data/josh/EditedMovies/2101to400a.stk: 
   [testng] [2025-03-12 03:44:44,038] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish7_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:45:04,391] [pool-1-thread-10] Initializing /data/josh/EditedMovies/2101to600a.stk: 
   [testng] [2025-03-12 03:46:14,943] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:46:38,780] [pool-1-thread-6] Initializing /data/benedikt/LosslessCompressedSTK.stk: 
   [testng] [2025-03-12 03:47:16,188] [pool-1-thread-6] Initializing /data/josh/2101to400astk.stk: 
   [testng] [2025-03-12 03:47:35,431] [pool-1-thread-3] Initializing /data/josh/EditedMovies/2101to800.stk: 
   [testng] [2025-03-12 03:47:43,937] [pool-1-thread-12] Initializing /data/tristan/data IJM/mw1/MDA_mw1(GFP)_w1GFP.TIF: 
   [testng] [2025-03-12 03:48:04,427] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.jpg: 
   [testng] [2025-03-12 03:48:11,705] [pool-1-thread-12] Initializing /data/tristan/data IJM/tl/MDA_TL_t1.TIF: 
   [testng] [2025-03-12 03:48:18,491] [pool-1-thread-10] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment5_w1DUAL 491-561_t1.TIF: 
   [testng] [2025-03-12 03:48:38,503] [pool-1-thread-3] Initializing /data/jcb/201008090/3T3_ShhN_C_Chh488.stk: 
   [testng] [2025-03-12 03:48:45,879] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:49:00,440] [pool-1-thread-3] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment3_w1CFP-YFP FRET 446.TIF: 
   [testng] [2025-03-12 03:49:27,849] [pool-1-thread-3] Initializing /data/fabrice/100722ac-2_w1RED_s1_t1.TIF: 
   [testng] [2025-03-12 03:49:42,091] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:50:04,987] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 03:50:26,719] [pool-1-thread-4] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 03:51:01,131] [pool-1-thread-4] Initializing /data/dan/CavAlpha1D_51490_engG4_F_101111_1.tif: 
   [testng] [2025-03-12 03:51:14,632] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s4t41_w1Laser4054BD4BP_s1_t1.stk: 
   [testng] [2025-03-12 03:54:04,090] [pool-1-thread-10] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment4_w1CFP-YFP FRET 446.TIF: 
   [testng] [2025-03-12 03:54:32,468] [pool-1-thread-10] Initializing /data/thomas/test.tif: 
   [testng] [2025-03-12 03:54:46,826] [pool-1-thread-10] Initializing /data/chris/exp1_w2CSU RED_s3_t003.stk: 
   [testng] [2025-03-12 03:55:02,221] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine.tif: 
   [testng] [2025-03-12 03:55:17,983] [pool-1-thread-10] Initializing /data/andressa/RPE/Sparse/Fibronectin/Color Combine.tif: 
   [testng] [2025-03-12 03:55:27,026] [pool-1-thread-4] Initializing /data/jcb/201007118/si133_J3_5_w18- 30- GFP_t1.STK: 
   [testng] [2025-03-12 03:55:37,009] [pool-1-thread-10] Initializing /data/jcb/201008090/3T3_ShhN_C_Nhh594.stk: 
   [testng] [2025-03-12 03:55:49,596] [pool-1-thread-10] Initializing /data/gh-2613/ScanSlide_exp1_rep0_w1confGFP_s1.tif: 
   [testng] [2025-03-12 03:56:06,562] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge.TIF: 
   [testng] [2025-03-12 03:56:26,133] [pool-1-thread-10] Initializing /data/ascb/golgi marker 2.tif: 
   [testng] [2025-03-12 03:56:40,621] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t2.TIF: 
   [testng] [2025-03-12 03:56:44,034] [pool-1-thread-10] Used files list does not include base file
   [testng] [2025-03-12 03:58:52,195] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish6_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 03:59:37,209] [pool-1-thread-12] Initializing /data/sebastien-besson/plk1/plk1_561nm_eb3_3_t1.TIF: 
   [testng] [2025-03-12 04:00:03,289] [pool-1-thread-12] Initializing /data/tristan/data IJM/mw3/MDA_MW3(GFP-RFP-GLP)_w1GFP.TIF: 
   [testng] [2025-03-12 04:00:28,346] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:00:45,201] [pool-1-thread-12] Initializing /data/grant/XYZC_Image_w1FITC.STK: 
   [testng] [2025-03-12 04:00:59,753] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:01:16,465] [pool-1-thread-6] Initializing /data/imagesc-39526/bottom/956662_PVTom_L7day_4x_z10um_bottom_Region-1_nTiles-029_1_conf561_s1.stk: 
   [testng] [2025-03-12 04:01:28,498] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:02:23,038] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.tif: 
   [testng] [2025-03-12 04:02:46,035] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t1.TIF: 
   [testng] [2025-03-12 04:02:49,874] [pool-1-thread-7] Used files list does not include base file
   [testng] [2025-03-12 04:03:10,069] [pool-1-thread-8] Initializing /data/gh-2613/ScanSlide_exp1_rep1_w1confGFP_s1.stk: 
   [testng] [2025-03-12 04:04:21,601] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish3_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:04:49,641] [pool-1-thread-7] Initializing /data/samples/zserSixteen.stk: 
   [testng] [2025-03-12 04:05:02,052] [pool-1-thread-6] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c1s1t1.tif: 
   [testng] [2025-03-12 04:05:06,894] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:05:29,313] [pool-1-thread-6] Initializing /data/sebastien-besson/001/120119_VimMito_001_w1DIC_t1.TIF: 
   [testng] [2025-03-12 04:06:55,528] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w2Filter FITC.TIF: 
   [testng] [2025-03-12 04:07:12,351] [pool-1-thread-4] Initializing /data/josh/EditedMovies/2101to600e.stk: 
   [testng] [2025-03-12 04:08:25,266] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Sparse/Collagen/Color Combine.tif: 
   [testng] [2025-03-12 04:08:41,005] [pool-1-thread-4] Initializing /data/andressa/RPE/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:09:19,227] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1B_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 04:12:17,410] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:13:07,585] [pool-1-thread-12] Initializing /data/aaron/L15_CTRL_FC1d_416_Da1.stk: 
   [testng] [2025-03-12 04:13:21,401] [pool-1-thread-12] Initializing /data/ascb/mt mklp1.tif: 
   [testng] [2025-03-12 04:13:36,160] [pool-1-thread-12] Initializing /data/qa-16915/m-02.tif: 
   [testng] [2025-03-12 04:13:51,799] [pool-1-thread-12] Initializing /data/jacques/Repositionnement/Repositionnement_s1_t1.TIF: 
   [testng] [2025-03-12 04:15:26,698] [pool-1-thread-12] Initializing /data/ascb/mt prc1 kif4 1.tif: 
   [testng] [2025-03-12 04:15:36,700] [pool-1-thread-8] Initializing /data/chris/Foo/exp1_w1_s1_t1.tif: 
   [testng] [2025-03-12 04:16:13,989] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:16:34,522] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-4.tif: 
   [testng] [2025-03-12 04:16:48,433] [pool-1-thread-7] Initializing /data/heiko/sample_2x2.stk: 
   [testng] [2025-03-12 04:17:02,916] [pool-1-thread-7] Initializing /data/imagesc-39526/20200622_GDF9_D21_MT Ovary_1/MT_Ovary-11_w1conf640_s1.stk: 
   [testng] [2025-03-12 04:17:26,016] [pool-1-thread-5] Initializing /data/alex/48h/48h_siGW25_w2FITC.TIF: 
   [testng] [2025-03-12 04:17:56,065] [pool-1-thread-5] Initializing /data/qa-16915/m-04.tif: 
   [testng] [2025-03-12 04:18:12,749] [pool-1-thread-5] Initializing /data/graham/G_Wright raw.stk: 
   [testng] [2025-03-12 04:18:23,879] [pool-1-thread-5] Initializing /data/qa-16915/m-02-561.ome.tif: 
   [testng] [2025-03-12 04:18:34,316] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish6_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 04:18:56,322] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Sparse/Serum/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:19:37,498] [pool-1-thread-5] Initializing /data/josh/2101to600b.stk: 
   [testng] [2025-03-12 04:21:23,796] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/Color Combine.tif: 
   [testng] [2025-03-12 04:21:39,166] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:22:06,592] [pool-1-thread-5] Initializing /data/sebastien/GA-2222 raf-1_w2Mono 475 nm.STK: 
   [testng] [2025-03-12 04:22:22,462] [pool-1-thread-5] Initializing /data/steve/Experiment2.stk: 
   [testng] [2025-03-12 04:22:39,433] [pool-1-thread-5] Initializing /data/olivier/01/CDYL_D0_frap_100x_01_w1491-DOUBLE-GFP-DsRed_t1.TIF: 
   [testng] [2025-03-12 04:23:23,623] [pool-1-thread-3] Initializing /data/qa-31304/Well _C6_1.tif: 
   [testng] [2025-03-12 04:23:39,216] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-3.tif: 
   [testng] [2025-03-12 04:23:54,700] [pool-1-thread-3] Initializing /data/ascb/C9  Stack.tif: 
   [testng] [2025-03-12 04:24:10,892] [pool-1-thread-3] Initializing /data/chris/test2_w2_s1_t2.stk: 
   [testng] [2025-03-12 04:24:21,701] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:25:00,854] [pool-1-thread-3] Initializing /data/andressa/RPE/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:25:41,193] [pool-1-thread-3] Initializing /data/alex/13/LJN_Y1136_13_w2FITC_t2.STK: 
   [testng] [2025-03-12 04:26:20,732] [pool-1-thread-3] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF: 
   [testng] [2025-03-12 04:27:20,202] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:31:12,527] [pool-1-thread-3] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t2.TIF: 
   [testng] [2025-03-12 04:31:15,167] [pool-1-thread-3] Used files list does not include base file
   [testng] [2025-03-12 04:31:43,944] [pool-1-thread-1] Initializing /data/tristan/data IJM/mw3_z/MDA_z_MW3(GFP_RFP_GLP)_w3GLP.TIF: 
   [testng] [2025-03-12 04:32:10,592] [pool-1-thread-2] Initializing /data/qa-16915/m-04-561.tif: 
   [testng] [2025-03-12 04:32:12,840] [pool-1-thread-1] Initializing /data/alex/15/LJN_Y1136_15_w2DAPI_t2.STK: 
   [testng] [2025-03-12 04:32:24,489] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:32:42,737] [pool-1-thread-3] Initializing /data/steve/Experiment2.tif: 
   [testng] [2025-03-12 04:32:47,993] [pool-1-thread-1] Initializing /data/qa-16907/1_w1Single SPI 405.TIF: 
   [testng] [2025-03-12 04:32:55,983] [pool-1-thread-3] Initializing /data/chris/exp1_w1CSU GREEN_s3_t001.stk: 
   [testng] [2025-03-12 04:32:57,754] [pool-1-thread-2] Initializing /data/stephane/Lame7-E5-Y+-001.stk: 
   [testng] [2025-03-12 04:33:02,675] [pool-1-thread-9] Initializing /data/thomas/t_test2001.tif: 
   [testng] [2025-03-12 04:33:08,080] [pool-1-thread-3] Initializing /data/lee/20130116-u2os-celldensitytest-72h-96h_m08_s9_w2766e46f1-81be-45a2-88b1-abe8da58c47a.tif: 
   [testng] [2025-03-12 04:33:11,858] [pool-1-thread-2] Initializing /data/dave/Z Series.stk: 
   [testng] [2025-03-12 04:33:15,741] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/Color Combine.tif: 
   [testng] [2025-03-12 04:33:16,968] [pool-1-thread-9] Initializing /data/qa-16915/m-02-488.ome.tif: 
   [testng] [2025-03-12 04:33:21,519] [pool-1-thread-3] Initializing /data/tristan/data IJM/mw2/MDA_mw2(GFP-RFP)_w1GFP.TIF: 
   [testng] [2025-03-12 04:33:24,281] [pool-1-thread-2] Initializing /data/lee/IXMtest_P24_s9_w560D948A4-4D16-49D0-9080-7575267498F9.tif: 
   [testng] [2025-03-12 04:33:28,782] [pool-1-thread-1] Initializing /data/samples/single-series-test/test_w1.TIF: 
   [testng] [2025-03-12 04:33:30,564] [pool-1-thread-9] Initializing /data/jacek/YFP2trans.tif: 
   [testng] [2025-03-12 04:33:36,699] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:33:42,884] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish1(ISO200nM)_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 04:33:57,145] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:34:01,788] [pool-1-thread-3] Initializing /data/ascb/mt prc1 kif4 3.tif: 
   [testng] [2025-03-12 04:34:05,378] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:34:16,927] [pool-1-thread-3] Initializing /data/ascb/RNA dye MT 2.tif: 
   [testng] [2025-03-12 04:34:28,561] [pool-1-thread-3] Initializing /data/heiko/metadata_3x3.jpg: 
   [testng] [2025-03-12 04:34:33,327] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish8_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 04:36:15,373] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 04:41:36,224] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish9_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 04:41:54,502] [pool-1-thread-2] Initializing /data/josh/2101to800.stk: 
   [testng] [2025-03-12 04:42:36,885] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:42:57,501] [pool-1-thread-2] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:43:03,191] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:43:15,616] [pool-1-thread-2] Initializing /data/strand/TS_200nm_3_w2Fluo GFP -100-.TIF: 
   [testng] [2025-03-12 04:43:34,285] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w3Filter TRITC.TIF: 
   [testng] [2025-03-12 04:43:43,427] [pool-1-thread-2] Initializing /data/sebastian/CLC2_GFP root4/0.1% DMSO root4001.tif: 
   [testng] [2025-03-12 04:43:50,592] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:44:13,877] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:48:25,379] [pool-1-thread-4] Initializing /data/andressa/RPE/Full Confluency/Serum/Color Combine.tif: 
   [testng] [2025-03-12 04:48:34,480] [pool-1-thread-4] Initializing /data/ascb/mt racgap1 dna.tif: 
   [testng] [2025-03-12 04:48:43,109] [pool-1-thread-4] Initializing /data/sebastien-besson/new/120711_D2_001/120711_D2_001_w1DUAL 491-561_t1.TIF: 
   [testng] [2025-03-12 04:49:12,759] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.jpg: 
   [testng] [2025-03-12 04:49:16,858] [pool-1-thread-4] Initializing /data/andressa/RPE/Full Confluency/Collagen/Color Combine 2.tif: 
   [testng] [2025-03-12 04:49:26,049] [pool-1-thread-4] Initializing /data/grant/Scale_bar_100um_XY_image.TIF: 
   [testng] [2025-03-12 04:49:33,489] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish5_w1FRET_s1_t1.TIF: 
   [testng] [2025-03-12 04:49:48,405] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w1Laser4054BD4BP_OverView.tif: 
   [testng] [2025-03-12 04:49:49,781] [pool-1-thread-4] Used files list does not include base file
   [testng] [2025-03-12 04:49:57,246] [pool-1-thread-5] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t11_w1Laser4054BD4BP.stk: 
   [testng] [2025-03-12 04:50:09,113] [pool-1-thread-4] Initializing /data/aaron/RR11_2 TRAINED mid lobIX 63X GFP568_s1.STK: 
   [testng] [2025-03-12 04:50:15,100] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:50:20,760] [pool-1-thread-4] Initializing /data/grant/X.STK: 
   [testng] [2025-03-12 04:50:34,230] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t41_w1Laser4054BD4BP_t1.stk: 
   [testng] [2025-03-12 04:51:04,938] [pool-1-thread-2] Initializing /data/qa-16915/m-01-488.ome.tif: 
   [testng] [2025-03-12 04:51:13,112] [pool-1-thread-2] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/Color Combine.tif: 
   [testng] [2025-03-12 04:51:14,424] [pool-1-thread-4] Initializing /data/andressa/RPE/Sparse/Serum/120806_2_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:51:21,641] [pool-1-thread-2] Initializing /data/alex/14/LJN_Y1136_14_w2FITC_t2.STK: 
   [testng] [2025-03-12 04:51:35,193] [pool-1-thread-4] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF: 
   [testng] [2025-03-12 04:51:43,225] [pool-1-thread-2] Initializing /data/jmuhlich/metamorph_scan_rgb/Scan 20x obj 40_w1_s1_t1.TIF: 
   [testng] [2025-03-12 04:51:48,298] [pool-1-thread-4] Initializing /data/alex/Selected FITC.stk: 
   [testng] [2025-03-12 04:51:56,513] [pool-1-thread-4] Initializing /data/samples/zserEight.stk: 
   [testng] [2025-03-12 04:52:04,209] [pool-1-thread-4] Initializing /data/jayne/2celltest10fpstl65power.stk: 
   [testng] [2025-03-12 04:52:14,346] [pool-1-thread-2] Initializing /data/sebastien-besson/A._WTChlor.2.nd_[Stage1__Position52_]/A. WTChlor.2_w20 Brightfield_s4.TIF: 
   [testng] [2025-03-12 04:52:16,993] [pool-1-thread-4] Initializing /data/andressa/RPE/Sparse/Serum/Color Combine.tif: 
   [testng] [2025-03-12 04:52:25,769] [pool-1-thread-4] Initializing /data/samples/diatoms3d.stk: 
   [testng] [2025-03-12 04:52:33,258] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t2.TIF: 
   [testng] [2025-03-12 04:52:35,260] [pool-1-thread-4] Used files list does not include base file
   [testng] [2025-03-12 04:53:35,983] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:53:47,822] [pool-1-thread-2] Initializing /data/qa-17827/G28P2E10-2 x5.TIF: 
   [testng] [2025-03-12 04:53:49,233] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:53:59,638] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w3Filter TRITC.TIF: 
   [testng] [2025-03-12 04:54:08,116] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Sparse/Serum/Color Combine.tif: 
   [testng] [2025-03-12 04:54:16,459] [pool-1-thread-2] Initializing /data/ascb/monopolar mt aim.tif: 
   [testng] [2025-03-12 04:54:24,259] [pool-1-thread-2] Initializing /data/graham/G_Wright deconvolved.stk: 
   [testng] [2025-03-12 04:54:31,820] [pool-1-thread-2] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t1.TIF: 
   [testng] [2025-03-12 04:54:33,747] [pool-1-thread-2] Used files list does not include base file
   [testng] [2025-03-12 04:55:32,280] [pool-1-thread-2] Initializing /data/chris-de-graffenried/2011-11-01/DOX FAZ1 568 PLK 4881_w1Cy3.stk: 
   [testng] [2025-03-12 04:55:55,106] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:56:15,352] [pool-1-thread-5] Initializing /data/chris/exp1_w1_s1_t1.tif: 
   [testng] [2025-03-12 04:56:16,707] [pool-1-thread-2] Initializing /data/grant/XYZ_Image.STK: 
   [testng] [2025-03-12 04:56:24,053] [pool-1-thread-5] Initializing /data/tristan/data IJM/mw1_z/MDA_z_MW1(GFP)_w1GFP.TIF: 
   [testng] [2025-03-12 04:56:30,349] [pool-1-thread-2] Initializing /data/josh/2101to600f.stk: 
   [testng] [2025-03-12 04:56:50,021] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w1Filter DAPI.TIF: 
   [testng] [2025-03-12 04:56:58,225] [pool-1-thread-5] Initializing /data/doil/001-23 dapi.stk: 
   [testng] [2025-03-12 04:57:09,995] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: 
   [testng] [2025-03-12 04:58:24,366] [pool-1-thread-5] Initializing /data/qa-16887/m-01.tif: 
   [testng] [2025-03-12 04:58:32,452] [pool-1-thread-2] Initializing /data/ascb/mt prc1 kif4 2.tif: 
   [testng] [2025-03-12 04:58:35,686] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-5.tif: 
   [testng] [2025-03-12 04:58:41,368] [pool-1-thread-2] Initializing /data/josh/2101to600astk.stk: 
   [testng] [2025-03-12 04:59:14,859] [pool-1-thread-5] Initializing /data/ved/Expt01_w1CFP FRET-S ND0.5_t1.TIF: 
   [testng] [2025-03-12 04:59:25,094] [pool-1-thread-4] Initializing /data/josh/EditedMovies/2101to600f.stk: 
   [testng] [2025-03-12 04:59:36,076] [pool-1-thread-7] Initializing /data/jcb/201008090/3T3_ShhN_C_DIC.stk: 
   [testng] [2025-03-12 04:59:44,858] [pool-1-thread-7] Initializing /data/samples/zser24.stk: 
   [testng] [2025-03-12 04:59:52,256] [pool-1-thread-7] Initializing /data/lee/397_w1447 laser_s17_t1_bad.TIF: 
   [testng] [2025-03-12 05:00:00,422] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t2.TIF: 
   [testng] [2025-03-12 05:00:02,278] [pool-1-thread-7] Used files list does not include base file
   [testng] [2025-03-12 05:00:03,311] [pool-1-thread-5] Initializing /data/samples/10xcalib.tif: 
   [testng] [2025-03-12 05:00:10,058] [pool-1-thread-5] Initializing /data/imagesc-wafle-2020-08-18/2020-07-31 BB3084 MT3 DAY 4 reactivation/BB3084 in MT3_1_w1SDC488_s1_t1.stk: 
   [testng] [2025-03-12 05:00:27,721] [pool-1-thread-4] Initializing /data/samples/zseries.stk: 
   [testng] [2025-03-12 05:00:34,232] [pool-1-thread-4] Initializing /data/ascb/golgi marker.tif: 
   [testng] [2025-03-12 05:00:42,084] [pool-1-thread-4] Initializing /data/sebastien-besson/new/04/04_w1Both lasers_t1.TIF: 
   [testng] 07:42:47,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 07:42:47,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 07:42:47,433 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-12_07-42-47.log]
   [testng] 07:42:47,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4102a674 - End of configuration.
   [testng] 07:45:18,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 07:45:18,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 07:45:18,971 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-12_07-45-18.log]
   [testng] 07:45:18,971 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35c034eb - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 13833, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 336 minutes 48 seconds
Finished: SUCCESS