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Started by upstream project "BIOFORMATS-test-repo" build number 378 originally caused by: Started by upstream project "Trigger" build number 400 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins14247783648122455156.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_59861_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 07:57:29,473 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 07:57:29,475 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 07:57:29,475 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 07:57:29,476 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 07:57:29,476 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 07:57:29,476 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 07:57:29,476 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 07:57:29,476 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 07:57:29,477 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 07:57:29,477 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 07:57:29,477 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 07:57:29,477 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 07:57:29,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 07:57:29,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 07:57:29,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 07:57:29,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 07:57:29,730 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 07:57:29,731 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 07:57:29,731 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 07:57:29,731 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 07:57:29,731 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 07:57:29,732 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 07:57:29,732 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 255 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-14 07:57:29,742] [main] java.version = 1.8.0_342 [testng] 07:57:29,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:57:29,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:57:29,789 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-14_07-57-29.log] [testng] 07:57:29,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-14 07:57:29,792] [main] testng.directory = /data [testng] [2025-03-14 07:57:29,793] [main] testng.configDirectory = /config [testng] [2025-03-14 07:57:29,805] [main] testng.multiplier = 1.0 [testng] [2025-03-14 07:57:29,805] [main] testng.in-memory = false [testng] [2025-03-14 07:57:29,805] [main] testng.allow-missing = false [testng] [2025-03-14 07:57:29,805] [main] user.language = en [testng] [2025-03-14 07:57:29,805] [main] user.country = ${user.country} [testng] [2025-03-14 07:57:29,805] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-14 08:03:35,155] [main] ---------------------------------------- [testng] [2025-03-14 08:03:35,155] [main] Total files: 15735 [testng] [2025-03-14 08:03:35,155] [main] Scan time: 365.35 s (23 ms/file) [testng] [2025-03-14 08:03:35,155] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-14 08:09:33,455] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 08:09:33,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:09:33,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:33,457 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-14_08-09-33.log] [testng] 08:09:33,457 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57469b7c - End of configuration. [testng] [2025-03-14 08:09:37,813] [pool-1-thread-12] Initializing /data/converted/dietmar/138.tif: [testng] 08:09:37,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 08:09:37,813 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:37,814 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-14_08-09-37.log] [testng] 08:09:37,814 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c4b7550 - End of configuration. [testng] [2025-03-14 08:09:41,442] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] 08:09:41,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 08:09:41,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:41,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-14_08-09-41.log] [testng] 08:09:41,444 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fb40da2 - End of configuration. [testng] [2025-03-14 08:09:44,600] [pool-1-thread-10] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] 08:09:44,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 08:09:44,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:44,601 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-14_08-09-44.log] [testng] 08:09:44,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b602508 - End of configuration. [testng] [2025-03-14 08:09:48,049] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] 08:09:48,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 08:09:48,049 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:48,049 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-14_08-09-48.log] [testng] 08:09:48,050 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1addb0fc - End of configuration. [testng] [2025-03-14 08:09:50,843] [pool-1-thread-8] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] 08:09:50,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 08:09:50,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:50,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-14_08-09-50.log] [testng] 08:09:50,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23fa7e29 - End of configuration. [testng] [2025-03-14 08:09:53,559] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] 08:09:53,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 08:09:53,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:53,560 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-14_08-09-53.log] [testng] 08:09:53,561 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30995890 - End of configuration. [testng] [2025-03-14 08:09:56,790] [pool-1-thread-6] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 08:09:56,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:09:56,791 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:56,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-14_08-09-56.log] [testng] 08:09:56,792 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fbd5456 - End of configuration. [testng] [2025-03-14 08:09:59,972] [pool-1-thread-5] Initializing /data/converted/michel/b.tif: [testng] 08:09:59,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 08:09:59,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:09:59,972 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-14_08-09-59.log] [testng] 08:09:59,973 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b1f67c6 - End of configuration. [testng] [2025-03-14 08:10:03,446] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] 08:10:03,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 08:10:03,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:10:03,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-14_08-10-03.log] [testng] 08:10:03,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11f0e528 - End of configuration. [testng] [2025-03-14 08:10:07,625] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] 08:10:07,625 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 08:10:07,625 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:10:07,625 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-14_08-10-07.log] [testng] 08:10:07,626 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5adac039 - End of configuration. [testng] [2025-03-14 08:10:10,241] [pool-1-thread-2] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] 08:10:10,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 08:10:10,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:10:10,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-14_08-10-10.log] [testng] 08:10:10,242 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57463cb6 - End of configuration. [testng] [2025-03-14 08:11:38,656] [pool-1-thread-5] Initializing /data/converted/converted/2chz.tif: [testng] [2025-03-14 08:11:42,468] [pool-1-thread-8] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-03-14 08:12:08,144] [pool-1-thread-2] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-03-14 08:19:27,897] [pool-1-thread-5] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-03-14 08:19:36,547] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-03-14 08:21:12,751] [pool-1-thread-5] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-03-14 08:22:25,620] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-03-14 08:24:58,442] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-03-14 08:25:11,550] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-03-14 08:26:04,279] [pool-1-thread-10] Initializing /data/othmar/mozaic.tif: [testng] [2025-03-14 08:26:33,035] [pool-1-thread-6] Initializing /data/converted/nicolas/image.tif: [testng] [2025-03-14 08:26:52,737] [pool-1-thread-11] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-03-14 08:27:12,748] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-03-14 08:27:31,295] [pool-1-thread-12] Initializing /data/scott/Slide133-01.tif: [testng] [2025-03-14 08:27:35,128] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-03-14 08:28:23,379] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-03-14 08:28:28,763] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-03-14 08:30:56,377] [pool-1-thread-11] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-03-14 08:31:46,910] [pool-1-thread-11] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-03-14 08:32:39,697] [pool-1-thread-11] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-03-14 08:33:40,122] [pool-1-thread-3] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-03-14 08:33:44,603] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-03-14 08:34:38,873] [pool-1-thread-11] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-03-14 08:36:18,663] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-03-14 08:37:25,977] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-03-14 08:40:36,833] [pool-1-thread-1] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-03-14 08:41:42,595] [pool-1-thread-1] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-03-14 08:41:51,376] [pool-1-thread-9] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-03-14 08:42:02,662] [pool-1-thread-11] Initializing /data/converted/sebastien/test.tif: [testng] [2025-03-14 08:43:28,871] [pool-1-thread-9] Initializing /data/converted/michel/d.tif: [testng] [2025-03-14 08:47:29,673] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2025-03-14 08:47:43,617] [pool-1-thread-12] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-03-14 08:50:37,215] [pool-1-thread-9] Initializing /data/scott/Slide133-08.tif: [testng] [2025-03-14 08:51:32,904] [pool-1-thread-12] Initializing /data/converted/dietmar/137.tif: [testng] [2025-03-14 08:52:18,283] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-03-14 08:53:15,864] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-03-14 08:54:08,514] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2025-03-14 08:55:34,040] [pool-1-thread-10] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-03-14 08:55:45,098] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-03-14 08:56:57,029] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-03-14 08:57:02,708] [pool-1-thread-9] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-03-14 08:58:12,127] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-03-14 09:01:20,530] [pool-1-thread-7] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-03-14 09:02:42,756] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-03-14 09:06:14,131] [pool-1-thread-5] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-03-14 09:13:39,151] [pool-1-thread-11] Initializing /data/converted/michel/e.tif: [testng] [2025-03-14 09:15:25,726] [pool-1-thread-8] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-03-14 09:15:31,136] [pool-1-thread-12] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-03-14 09:16:29,554] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-03-14 09:16:34,283] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-03-14 09:16:47,014] [pool-1-thread-8] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-03-14 09:17:45,631] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-03-14 09:19:39,208] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-03-14 09:26:17,044] [pool-1-thread-7] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-03-14 09:26:41,051] [pool-1-thread-9] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] 09:29:14,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 09:29:14,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:29:14,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-14_09-29-14.log] [testng] 09:29:14,282 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ddde907 - End of configuration. [testng] [2025-03-14 09:31:06,590] [pool-1-thread-8] Initializing /data/converted/michel/a.tif: [testng] 09:31:34,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 09:31:34,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:31:34,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-14_09-31-34.log] [testng] 09:31:34,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@554cfa0b - End of configuration. [testng] [2025-03-14 09:32:07,387] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-03-14 09:34:14,034] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-03-14 09:35:38,204] [pool-1-thread-7] Initializing /data/scott/Slide133-11.tif: [testng] [2025-03-14 09:36:42,670] [pool-1-thread-7] Initializing /data/converted/michel/c.tif: [testng] [2025-03-14 09:36:47,338] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-03-14 09:36:51,398] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-03-14 09:37:47,353] [pool-1-thread-4] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-03-14 09:38:45,105] [pool-1-thread-7] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-03-14 09:38:56,588] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-03-14 09:40:03,413] [pool-1-thread-7] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-03-14 09:40:39,372] [pool-1-thread-1] Initializing /data/scott/Slide133-04.tif: [testng] [2025-03-14 09:41:08,786] [pool-1-thread-2] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-03-14 09:41:41,232] [pool-1-thread-3] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-03-14 09:41:56,443] [pool-1-thread-1] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-03-14 09:42:49,281] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-03-14 09:43:08,864] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2025-03-14 09:43:29,325] [pool-1-thread-6] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-03-14 09:45:18,660] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-03-14 09:46:44,166] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-03-14 09:47:27,165] [pool-1-thread-4] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-03-14 09:47:55,257] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-03-14 09:48:27,757] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-03-14 09:50:06,119] [pool-1-thread-4] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-03-14 09:51:59,972] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-03-14 09:54:00,055] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] 10:02:55,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 10:02:55,348 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:02:55,349 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-14_10-02-55.log] [testng] 10:02:55,350 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7841e1fe - End of configuration. [testng] [2025-03-14 10:04:25,647] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-03-14 10:04:52,611] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-03-14 10:07:12,072] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-03-14 10:09:28,920] [pool-1-thread-6] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-03-14 10:12:04,972] [pool-1-thread-6] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-03-14 10:14:07,729] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-03-14 10:14:16,551] [pool-1-thread-7] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-03-14 10:17:59,619] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-03-14 10:21:09,063] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2025-03-14 10:23:30,089] [pool-1-thread-10] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2025-03-14 10:25:05,602] [pool-1-thread-2] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-03-14 10:43:47,660] [pool-1-thread-10] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-03-14 10:45:01,433] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-03-14 10:46:12,600] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-03-14 10:46:56,780] [pool-1-thread-8] Initializing /data/converted/converted/damian.tif: [testng] [2025-03-14 10:47:51,340] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-03-14 10:48:40,372] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-03-14 10:49:20,418] [pool-1-thread-10] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 10:50:33,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 10:50:33,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:50:33,394 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-14_10-50-33.log] [testng] 10:50:33,394 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d5879b3 - End of configuration. [testng] [2025-03-14 10:50:57,431] [pool-1-thread-5] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-03-14 10:51:09,452] [pool-1-thread-10] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-03-14 10:51:51,865] [pool-1-thread-3] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-03-14 10:52:18,286] [pool-1-thread-10] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-03-14 10:52:31,133] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-03-14 10:52:51,393] [pool-1-thread-3] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-03-14 10:53:16,832] [pool-1-thread-10] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-03-14 10:53:33,118] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-03-14 10:53:56,695] [pool-1-thread-11] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-03-14 10:54:36,599] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-03-14 10:56:22,800] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-03-14 10:57:14,604] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2025-03-14 10:58:08,504] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-03-14 10:58:21,359] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] 11:08:57,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 11:08:57,186 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:08:57,187 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-14_11-08-57.log] [testng] 11:08:57,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d441376 - End of configuration. [testng] 11:59:39,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 11:59:39,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:59:39,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-14_11-59-39.log] [testng] 11:59:39,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3309b6cd - End of configuration. [testng] 13:18:47,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 13:18:47,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:18:47,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-14_13-18-47.log] [testng] 13:18:47,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@738afebf - End of configuration. [testng] 13:27:27,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 13:27:27,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:27:27,393 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-14_13-27-27.log] [testng] 13:27:27,394 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3656a6cd - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 330 minutes 6 seconds Finished: SUCCESS