![[Jenkins]](/jenkins/static/aacddba8/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 379 originally caused by: Started by upstream project "Trigger" build number 401 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins15349585121783453217.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_59908_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:24:54,331 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:24:54,332 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 00:24:54,332 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:24:54,333 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:24:54,334 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:24:54,334 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:24:54,335 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:24:54,335 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:24:54,335 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:24:54,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:24:54,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:24:54,336 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:24:54,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:24:54,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:24:54,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:24:54,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:24:54,549 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:24:54,549 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:24:54,550 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:24:54,550 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:24:54,550 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 00:24:54,551 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 00:24:54,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 216 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-15 00:24:54,561] [main] java.version = 11.0.16 [testng] 00:24:54,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:24:54,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:24:54,610 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-15_00-24-54.log] [testng] 00:24:54,612 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-15 00:24:54,615] [main] testng.directory = /data [testng] [2025-03-15 00:24:54,615] [main] testng.configDirectory = /config [testng] [2025-03-15 00:24:54,626] [main] testng.multiplier = 1.0 [testng] [2025-03-15 00:24:54,627] [main] testng.in-memory = false [testng] [2025-03-15 00:24:54,627] [main] testng.allow-missing = false [testng] [2025-03-15 00:24:54,627] [main] user.language = en [testng] [2025-03-15 00:24:54,627] [main] user.country = ${user.country} [testng] [2025-03-15 00:24:54,628] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-15 00:25:59,550] [main] ---------------------------------------- [testng] [2025-03-15 00:25:59,550] [main] Total files: 320 [testng] [2025-03-15 00:25:59,550] [main] Scan time: 64.921 s (202 ms/file) [testng] [2025-03-15 00:25:59,550] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 196 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-15 00:47:23,514] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: [testng] 00:47:23,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:47:23,516 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:23,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-15_00-47-23.log] [testng] 00:47:23,518 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25ccbf0b - End of configuration. [testng] [2025-03-15 00:47:24,680] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] 00:47:24,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:47:24,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:24,681 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-15_00-47-24.log] [testng] 00:47:24,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4945ef80 - End of configuration. [testng] [2025-03-15 00:47:27,861] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] 00:47:27,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:47:27,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:27,862 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-15_00-47-27.log] [testng] 00:47:27,863 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b32cf7b - End of configuration. [testng] [2025-03-15 00:47:30,388] [pool-1-thread-10] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame_z stack.oir: [testng] 00:47:30,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:47:30,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:30,389 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-15_00-47-30.log] [testng] 00:47:30,390 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4419b36f - End of configuration. [testng] [2025-03-15 00:47:31,486] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] 00:47:31,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:47:31,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:31,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-15_00-47-31.log] [testng] 00:47:31,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14154bc7 - End of configuration. [testng] [2025-03-15 00:47:33,028] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 00:47:33,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:47:33,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:33,029 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-15_00-47-33.log] [testng] 00:47:33,029 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f39c993 - End of configuration. [testng] [2025-03-15 00:47:37,047] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] 00:47:37,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:47:37,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:37,049 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-15_00-47-37.log] [testng] 00:47:37,049 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57fc5953 - End of configuration. [testng] [2025-03-15 00:47:42,387] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] 00:47:42,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:47:42,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:42,388 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-15_00-47-42.log] [testng] 00:47:42,388 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d0f9222 - End of configuration. [testng] [2025-03-15 00:47:43,384] [pool-1-thread-5] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.vsi: [testng] 00:47:43,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:47:43,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:43,384 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-15_00-47-43.log] [testng] 00:47:43,385 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b3753a6 - End of configuration. [testng] [2025-03-15 00:47:49,551] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 00:47:49,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:47:49,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:47:49,552 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-15_00-47-49.log] [testng] 00:47:49,553 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f2b2457 - End of configuration. [testng] [2025-03-15 00:48:00,211] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] 00:48:00,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:48:00,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:00,212 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-15_00-48-00.log] [testng] 00:48:00,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cf01ca3 - End of configuration. [testng] [2025-03-15 00:48:04,271] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] 00:48:04,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:48:04,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:48:04,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-15_00-48-04.log] [testng] 00:48:04,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47a48bda - End of configuration. [testng] [2025-03-15 00:48:12,876] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2025-03-15 00:48:13,591] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2025-03-15 00:48:16,573] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2025-03-15 00:48:18,883] [pool-1-thread-6] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2025-03-15 00:48:20,612] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2025-03-15 00:48:22,423] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2025-03-15 00:48:23,585] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2025-03-15 00:48:24,606] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2025-03-15 00:48:25,651] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2025-03-15 00:48:26,548] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2025-03-15 00:48:27,610] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2025-03-15 00:48:29,095] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2025-03-15 00:48:37,684] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2025-03-15 00:48:44,736] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2025-03-15 00:48:45,929] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2025-03-15 00:48:48,308] [pool-1-thread-7] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2025-03-15 00:48:49,414] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2025-03-15 00:48:50,671] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2025-03-15 00:48:51,970] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2025-03-15 00:48:53,961] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2025-03-15 00:48:55,197] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2025-03-15 00:48:56,098] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] [2025-03-15 00:48:57,936] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2025-03-15 00:49:06,842] [pool-1-thread-10] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: [testng] [2025-03-15 00:49:16,476] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2025-03-15 00:49:18,116] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2025-03-15 00:49:19,456] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2025-03-15 00:49:20,745] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2025-03-15 00:49:23,172] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2025-03-15 00:49:24,509] [pool-1-thread-1] Initializing /data/qa-17293/Clipboard.tif: [testng] [2025-03-15 00:49:26,561] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2025-03-15 00:49:27,279] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2025-03-15 00:49:29,075] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2025-03-15 00:49:38,531] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2025-03-15 00:49:39,767] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2025-03-15 00:49:40,918] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2025-03-15 00:49:43,249] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2025-03-15 00:49:45,293] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2025-03-15 00:49:47,574] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2025-03-15 00:49:48,534] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2025-03-15 00:49:49,818] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2025-03-15 00:49:52,491] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2025-03-15 00:49:58,736] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2025-03-15 00:50:00,434] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2025-03-15 00:50:01,119] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2025-03-15 00:50:02,084] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2025-03-15 00:50:03,507] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2025-03-15 00:50:04,497] [pool-1-thread-1] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2025-03-15 00:50:05,841] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2025-03-15 00:50:07,641] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2025-03-15 00:50:14,701] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2025-03-15 00:50:17,250] [pool-1-thread-11] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: [testng] [2025-03-15 00:50:18,109] [pool-1-thread-8] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2025-03-15 00:50:21,693] [pool-1-thread-6] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2025-03-15 00:50:23,064] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2025-03-15 00:50:24,111] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2025-03-15 00:50:25,260] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2025-03-15 00:50:26,489] [pool-1-thread-12] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2025-03-15 00:50:28,161] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2025-03-15 00:50:32,283] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-15 00:50:36,539] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2025-03-15 00:50:37,386] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2025-03-15 00:50:38,148] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2025-03-15 00:50:41,890] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2025-03-15 00:50:42,652] [pool-1-thread-9] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2025-03-15 00:51:41,357] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2025-03-15 00:51:50,552] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2025-03-15 00:51:52,004] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2025-03-15 00:51:53,366] [pool-1-thread-7] Initializing /data/olympus/XYZt.oir: [testng] [2025-03-15 00:51:56,690] [pool-1-thread-12] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2025-03-15 00:52:02,586] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2025-03-15 00:52:04,057] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2025-03-15 00:52:08,297] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2025-03-15 00:52:09,398] [pool-1-thread-6] Initializing /data/qa-17335/1.oir: [testng] [2025-03-15 00:52:10,437] [pool-1-thread-11] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-15 00:52:15,614] [pool-1-thread-12] Initializing /data/olympus/calcium sparks_XYt.vsi: [testng] [2025-03-15 00:52:25,780] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2025-03-15 00:52:26,547] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2025-03-15 00:52:27,208] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2025-03-15 00:52:28,597] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2025-03-15 00:52:37,470] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2025-03-15 00:52:38,497] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2025-03-15 00:52:39,259] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg: [testng] [2025-03-15 00:52:39,963] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2025-03-15 00:52:45,586] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2025-03-15 00:52:46,948] [pool-1-thread-7] Initializing /data/qa-17409/Clipboard.tif: [testng] [2025-03-15 00:52:48,309] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2025-03-15 00:52:49,270] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2025-03-15 00:52:55,797] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2025-03-15 00:52:59,531] [pool-1-thread-4] Initializing /data/qa-17270/image1.oir: [testng] [2025-03-15 00:53:05,609] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir: [testng] [2025-03-15 00:53:30,703] [pool-1-thread-8] Initializing /data/public/imagesc-105684/1202-interval_10sec_sequence_frame.oir: [testng] [2025-03-15 00:53:31,711] [pool-1-thread-12] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2025-03-15 00:53:32,395] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2025-03-15 00:53:33,503] [pool-1-thread-7] Initializing /data/qa-17335/1.ome.tif: [testng] [2025-03-15 00:53:40,772] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2025-03-15 00:53:44,278] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2025-03-15 00:53:45,910] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2025-03-15 00:53:47,097] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2025-03-15 00:53:48,111] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2025-03-15 00:53:49,948] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2025-03-15 00:53:54,024] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2025-03-15 00:53:55,879] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2025-03-15 00:53:58,202] [pool-1-thread-8] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2025-03-15 00:54:00,450] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2025-03-15 00:54:03,878] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2025-03-15 00:54:05,005] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2025-03-15 00:54:06,473] [pool-1-thread-6] Initializing /data/olympus/XYZt.vsi: [testng] [2025-03-15 00:54:07,353] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2025-03-15 00:54:12,298] [pool-1-thread-5] Initializing /data/public/imagesc-105684/1202-interval_freeRun_sequence_frame.oir: [testng] [2025-03-15 00:54:13,687] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2025-03-15 00:54:15,328] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2025-03-15 00:54:16,447] [pool-1-thread-3] Initializing /data/qa-16871/Clipboard.tif: [testng] [2025-03-15 00:54:18,001] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2025-03-15 00:54:23,985] [pool-1-thread-12] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2025-03-15 00:54:24,965] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.oir: [testng] [2025-03-15 00:54:28,538] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2025-03-15 00:54:29,690] [pool-1-thread-6] Initializing /data/qa-17917/f10010.oir: [testng] [2025-03-15 00:55:02,423] [pool-1-thread-3] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2025-03-15 00:55:03,850] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2025-03-15 00:55:09,483] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2025-03-15 00:55:13,619] [pool-1-thread-8] Initializing /data/cudmore/20190401__0005.oir: [testng] [2025-03-15 00:55:19,770] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2025-03-15 00:55:22,558] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2025-03-15 00:55:24,032] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2025-03-15 00:55:34,270] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2025-03-15 00:55:40,388] [pool-1-thread-12] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2025-03-15 00:55:41,690] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2025-03-15 00:55:57,719] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2025-03-15 00:56:05,553] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2025-03-15 00:56:11,354] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2025-03-15 00:56:25,337] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2025-03-15 00:56:28,780] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2025-03-15 00:56:53,814] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.oir: [testng] [2025-03-15 00:56:57,309] [pool-1-thread-5] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2025-03-15 00:57:02,851] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2025-03-15 00:57:09,856] [pool-1-thread-5] Initializing /data/olympus/XYZt.ome.tif: [testng] [2025-03-15 00:57:15,869] [pool-1-thread-8] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2025-03-15 00:57:27,591] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2025-03-15 00:57:28,589] [pool-1-thread-5] Initializing /data/qa-17919/f10187.oir: [testng] [2025-03-15 00:57:48,959] [pool-1-thread-1] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2025-03-15 00:57:50,860] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2025-03-15 00:57:55,357] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2025-03-15 00:58:06,561] [pool-1-thread-4] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2025-03-15 00:58:24,206] [pool-1-thread-1] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2025-03-15 00:58:37,123] [pool-1-thread-8] Initializing /data/qa-17331/Clipboard.tif: [testng] [2025-03-15 00:58:42,742] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2025-03-15 00:58:48,936] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2025-03-15 00:59:13,328] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2025-03-15 00:59:17,289] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2025-03-15 00:59:23,096] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2025-03-15 00:59:26,028] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2025-03-15 00:59:41,978] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2025-03-15 00:59:47,488] [pool-1-thread-4] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2025-03-15 00:59:52,557] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2025-03-15 00:59:58,605] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2025-03-15 01:00:00,635] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2025-03-15 01:00:08,330] [pool-1-thread-11] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2025-03-15 01:00:10,157] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2025-03-15 01:00:13,496] [pool-1-thread-8] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2025-03-15 01:00:14,807] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2025-03-15 01:00:17,347] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2025-03-15 01:00:21,643] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2025-03-15 01:00:26,798] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2025-03-15 01:00:33,346] [pool-1-thread-12] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2025-03-15 01:00:34,547] [pool-1-thread-1] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2025-03-15 01:00:37,705] [pool-1-thread-11] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2025-03-15 01:00:41,825] [pool-1-thread-6] Initializing /data/public/imagesc-105684/1202-interval_30sec_sequence_frame.oir: [testng] [2025-03-15 01:00:43,374] [pool-1-thread-12] Initializing /data/qa-17270/image1.ome.tif: [testng] [2025-03-15 01:00:44,457] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2025-03-15 01:00:48,214] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2025-03-15 01:00:57,901] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: [testng] [2025-03-15 01:01:00,851] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2025-03-15 01:01:11,304] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2025-03-15 01:01:12,453] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2025-03-15 01:01:16,120] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2025-03-15 01:01:23,627] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2025-03-15 01:01:26,715] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2025-03-15 01:01:28,171] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2025-03-15 01:01:30,002] [pool-1-thread-5] Initializing /data/public/etienne/venus stack.oir: [testng] [2025-03-15 01:01:36,514] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2025-03-15 01:01:54,327] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2025-03-15 01:02:18,919] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2025-03-15 01:02:42,841] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10388, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 67 minutes 1 second Finished: SUCCESS