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Started by upstream project "BIOFORMATS-test-repo" build number 379 originally caused by: Started by upstream project "Trigger" build number 401 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins5165774094145730505.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_60026_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 08:06:39,992 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 08:06:39,993 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 08:06:39,993 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 08:06:39,994 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 08:06:39,995 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 08:06:39,995 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 08:06:39,995 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 08:06:39,995 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 08:06:39,996 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 08:06:39,996 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 08:06:39,997 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 08:06:39,997 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 08:06:40,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 08:06:40,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 08:06:40,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 08:06:40,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 08:06:40,189 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 08:06:40,189 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 08:06:40,189 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 08:06:40,190 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 08:06:40,190 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 08:06:40,191 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 08:06:40,191 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-15 08:06:40,200] [main] java.version = 11.0.16 [testng] 08:06:40,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 08:06:40,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:06:40,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-15_08-06-40.log] [testng] 08:06:40,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-15 08:06:40,247] [main] testng.directory = /data [testng] [2025-03-15 08:06:40,247] [main] testng.configDirectory = /config [testng] [2025-03-15 08:06:40,256] [main] testng.multiplier = 1.0 [testng] [2025-03-15 08:06:40,257] [main] testng.in-memory = false [testng] [2025-03-15 08:06:40,257] [main] testng.allow-missing = false [testng] [2025-03-15 08:06:40,257] [main] user.language = en [testng] [2025-03-15 08:06:40,257] [main] user.country = ${user.country} [testng] [2025-03-15 08:06:40,258] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-15 08:12:00,344] [main] ---------------------------------------- [testng] [2025-03-15 08:12:00,344] [main] Total files: 15735 [testng] [2025-03-15 08:12:00,344] [main] Scan time: 320.086 s (20 ms/file) [testng] [2025-03-15 08:12:00,344] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-15 08:20:05,083] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] 08:20:05,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:20:05,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:05,085 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-15_08-20-05.log] [testng] 08:20:05,086 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d1ab259 - End of configuration. [testng] [2025-03-15 08:20:07,421] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] 08:20:07,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 08:20:07,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:07,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-15_08-20-07.log] [testng] 08:20:07,423 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d809fbe - End of configuration. [testng] [2025-03-15 08:20:10,340] [pool-1-thread-11] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] 08:20:10,340 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 08:20:10,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:10,341 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-15_08-20-10.log] [testng] 08:20:10,342 |-INFO in ch.qos.logback.core.sift.SiftProcessor@596a8d2a - End of configuration. [testng] [2025-03-15 08:20:12,916] [pool-1-thread-10] Initializing /data/converted/vladan/vladan.tif: [testng] 08:20:12,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 08:20:12,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:12,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-15_08-20-12.log] [testng] 08:20:12,917 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c4de238 - End of configuration. [testng] [2025-03-15 08:20:16,920] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 08:20:16,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 08:20:16,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:16,921 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-15_08-20-16.log] [testng] 08:20:16,922 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3984359 - End of configuration. [testng] [2025-03-15 08:20:20,014] [pool-1-thread-8] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 08:20:20,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 08:20:20,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:20,015 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-15_08-20-20.log] [testng] 08:20:20,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e76cdec - End of configuration. [testng] [2025-03-15 08:20:22,773] [pool-1-thread-7] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] 08:20:22,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 08:20:22,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:22,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-15_08-20-22.log] [testng] 08:20:22,774 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f65fe36 - End of configuration. [testng] [2025-03-15 08:20:25,756] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] 08:20:25,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:20:25,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:25,756 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-15_08-20-25.log] [testng] 08:20:25,757 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d06f91a - End of configuration. [testng] [2025-03-15 08:20:29,184] [pool-1-thread-5] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] 08:20:29,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 08:20:29,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:29,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-15_08-20-29.log] [testng] 08:20:29,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a273322 - End of configuration. [testng] [2025-03-15 08:20:31,547] [pool-1-thread-4] Initializing /data/converted/michel/b.tif: [testng] 08:20:31,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 08:20:31,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:31,548 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-15_08-20-31.log] [testng] 08:20:31,549 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b76fa6 - End of configuration. [testng] [2025-03-15 08:20:34,271] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 08:20:34,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 08:20:34,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:34,272 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-15_08-20-34.log] [testng] 08:20:34,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74cd3efb - End of configuration. [testng] [2025-03-15 08:20:37,168] [pool-1-thread-2] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] 08:20:37,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 08:20:37,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:20:37,169 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-15_08-20-37.log] [testng] 08:20:37,169 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fd78436 - End of configuration. [testng] [2025-03-15 08:21:34,585] [pool-1-thread-3] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2025-03-15 08:21:38,694] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-03-15 08:21:43,630] [pool-1-thread-5] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-03-15 08:21:55,491] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-03-15 08:22:07,654] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2025-03-15 08:22:14,297] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-03-15 08:22:22,999] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-03-15 08:22:46,404] [pool-1-thread-9] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-03-15 08:23:17,756] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-03-15 08:23:51,789] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-03-15 08:23:55,850] [pool-1-thread-5] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-03-15 08:25:20,331] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2025-03-15 08:25:46,341] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2025-03-15 08:26:53,404] [pool-1-thread-11] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2025-03-15 08:30:40,856] [pool-1-thread-2] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2025-03-15 08:31:28,226] [pool-1-thread-2] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-03-15 08:31:54,290] [pool-1-thread-11] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-03-15 08:32:11,439] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-03-15 08:32:52,739] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2025-03-15 08:33:03,019] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-03-15 08:33:32,273] [pool-1-thread-10] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2025-03-15 08:34:56,069] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-03-15 08:36:37,135] [pool-1-thread-7] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-03-15 08:37:34,614] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-03-15 08:37:51,384] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-03-15 08:39:04,696] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-03-15 08:39:49,083] [pool-1-thread-4] Initializing /data/scott/Slide133-08.tif: [testng] [2025-03-15 08:40:30,971] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-03-15 08:40:38,915] [pool-1-thread-9] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-03-15 08:40:51,104] [pool-1-thread-4] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-03-15 08:41:10,366] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-03-15 08:43:03,346] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-03-15 08:43:13,834] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-03-15 08:43:54,425] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-03-15 08:44:29,019] [pool-1-thread-6] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-03-15 08:44:52,384] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-03-15 08:45:13,592] [pool-1-thread-6] Initializing /data/converted/dietmar/137.tif: [testng] [2025-03-15 08:46:45,274] [pool-1-thread-2] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-03-15 08:46:59,648] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-03-15 08:47:41,866] [pool-1-thread-2] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-03-15 08:51:14,896] [pool-1-thread-11] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-03-15 08:54:13,402] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2025-03-15 08:56:25,161] [pool-1-thread-11] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-03-15 09:06:05,100] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-03-15 09:13:10,458] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2025-03-15 09:13:31,514] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-03-15 09:14:30,038] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-03-15 09:15:04,280] [pool-1-thread-12] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-03-15 09:16:09,317] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-03-15 09:16:36,147] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-03-15 09:16:51,032] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-03-15 09:19:38,018] [pool-1-thread-8] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-03-15 09:26:06,060] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-03-15 09:32:09,075] [pool-1-thread-3] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2025-03-15 09:33:01,000] [pool-1-thread-1] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2025-03-15 09:36:24,142] [pool-1-thread-12] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-03-15 09:37:33,507] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-03-15 09:40:14,998] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-03-15 09:41:26,635] [pool-1-thread-6] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-03-15 09:43:23,229] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-03-15 09:43:59,069] [pool-1-thread-12] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-03-15 09:44:11,042] [pool-1-thread-11] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-03-15 09:46:11,432] [pool-1-thread-10] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-03-15 09:46:26,092] [pool-1-thread-1] Initializing /data/converted/converted/damian.tif: [testng] [2025-03-15 09:47:27,080] [pool-1-thread-1] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-03-15 09:48:15,044] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-03-15 09:49:32,699] [pool-1-thread-1] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 09:49:38,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 09:49:38,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:49:38,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-15_09-49-38.log] [testng] 09:49:38,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dc9208a - End of configuration. [testng] [2025-03-15 09:51:14,419] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-03-15 09:52:17,713] [pool-1-thread-4] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-03-15 09:53:39,391] [pool-1-thread-4] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-03-15 09:54:31,204] [pool-1-thread-11] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-03-15 09:56:14,097] [pool-1-thread-4] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-03-15 09:59:32,081] [pool-1-thread-4] Initializing /data/converted/dietmar/138.tif: [testng] [2025-03-15 09:59:57,274] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-03-15 10:09:06,726] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-03-15 10:10:24,603] [pool-1-thread-5] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-03-15 10:11:18,589] [pool-1-thread-10] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-03-15 10:11:31,666] [pool-1-thread-5] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-03-15 10:12:30,303] [pool-1-thread-10] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-03-15 10:12:34,520] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-03-15 10:13:32,917] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-03-15 10:17:15,713] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-03-15 10:18:03,037] [pool-1-thread-9] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-03-15 10:19:31,962] [pool-1-thread-11] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2025-03-15 10:20:37,260] [pool-1-thread-9] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-03-15 10:22:42,961] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] 10:24:05,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 10:24:05,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:24:05,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-15_10-24-05.log] [testng] 10:24:05,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56e0d4d6 - End of configuration. [testng] [2025-03-15 10:24:46,825] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-03-15 10:31:44,331] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-03-15 10:31:48,243] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-03-15 10:32:17,818] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2025-03-15 10:32:29,160] [pool-1-thread-5] Initializing /data/converted/converted/mri-stack.tif: [testng] [2025-03-15 10:33:17,904] [pool-1-thread-5] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-03-15 10:34:27,377] [pool-1-thread-5] Initializing /data/converted/converted/2chz.tif: [testng] [2025-03-15 10:35:34,458] [pool-1-thread-3] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-03-15 10:37:49,857] [pool-1-thread-3] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] 10:37:58,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 10:37:58,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:37:58,089 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-15_10-37-58.log] [testng] 10:37:58,089 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42ca27fc - End of configuration. [testng] [2025-03-15 10:39:42,823] [pool-1-thread-4] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-03-15 10:40:45,232] [pool-1-thread-4] Initializing /data/converted/michel/d.tif: [testng] [2025-03-15 10:41:15,683] [pool-1-thread-9] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2025-03-15 10:41:54,770] [pool-1-thread-5] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2025-03-15 10:42:11,923] [pool-1-thread-4] Initializing /data/scott/Slide133-04.tif: [testng] [2025-03-15 10:42:37,400] [pool-1-thread-3] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-03-15 10:42:50,239] [pool-1-thread-11] Initializing /data/converted/michel/e.tif: [testng] [2025-03-15 10:43:07,519] [pool-1-thread-4] Initializing /data/converted/nicolas/image.tif: [testng] [2025-03-15 10:43:38,701] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-03-15 10:43:57,830] [pool-1-thread-4] Initializing /data/converted/michel/a.tif: [testng] [2025-03-15 10:44:42,615] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-03-15 10:44:46,581] [pool-1-thread-4] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-03-15 10:45:24,114] [pool-1-thread-8] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-03-15 10:45:33,536] [pool-1-thread-4] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-03-15 10:46:28,228] [pool-1-thread-8] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-03-15 10:46:59,867] [pool-1-thread-1] Initializing /data/converted/michel/c.tif: [testng] [2025-03-15 10:47:13,687] [pool-1-thread-10] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-03-15 10:47:32,758] [pool-1-thread-12] Initializing /data/othmar/mozaic.tif: [testng] 11:33:24,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 11:33:24,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:33:24,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-15_11-33-24.log] [testng] 11:33:24,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6953c8e3 - End of configuration. [testng] 12:06:25,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:06:25,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:25,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-15_12-06-25.log] [testng] 12:06:25,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77ee1902 - End of configuration. [testng] 12:12:03,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 12:12:03,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:12:03,151 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-15_12-12-03.log] [testng] 12:12:03,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d8cfad5 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 245 minutes 28 seconds Finished: SUCCESS