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Started by upstream project "BIOFORMATS-test-repo" build number 381 originally caused by: Started by upstream project "Trigger" build number 403 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins14439422313969092469.sh + '[' fei = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_60255_merge_ci -v /uod/idr/repos/curated/fei:/data -v /uod/idr-scratch/merge-ci/curated/fei:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:37:35,820 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 03:37:35,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 03:37:35,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:37:35,823 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:37:35,823 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:37:35,823 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:37:35,824 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:37:35,824 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:37:35,824 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:37:35,824 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:37:35,824 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:37:35,825 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:37:36,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:37:36,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:37:36,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:37:36,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:37:36,072 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:37:36,072 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:37:36,072 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:37:36,072 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:37:36,072 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 03:37:36,073 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 03:37:36,073 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 249 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-17 03:37:36,083] [main] java.version = 1.8.0_342 [testng] 03:37:36,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:37:36,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:37:36,129 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-17_03-37-36.log] [testng] 03:37:36,130 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-17 03:37:36,132] [main] testng.directory = /data [testng] [2025-03-17 03:37:36,132] [main] testng.configDirectory = /config [testng] [2025-03-17 03:37:36,144] [main] testng.multiplier = 1.0 [testng] [2025-03-17 03:37:36,144] [main] testng.in-memory = false [testng] [2025-03-17 03:37:36,144] [main] testng.allow-missing = false [testng] [2025-03-17 03:37:36,144] [main] user.language = fr [testng] [2025-03-17 03:37:36,144] [main] user.country = FR [testng] [2025-03-17 03:37:36,145] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-17 03:37:46,361] [main] ---------------------------------------- [testng] [2025-03-17 03:37:46,361] [main] Total files: 21 [testng] [2025-03-17 03:37:46,361] [main] Scan time: 10.216 s (486 ms/file) [testng] [2025-03-17 03:37:46,361] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-17 03:39:28,362] [pool-1-thread-1] Initializing /data/antoine/Tile_001-002-000_0-000.tif: [testng] 03:39:28,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:39:28,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:28,363 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-17_03-39-28.log] [testng] 03:39:28,364 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ad5063e - End of configuration. [testng] [2025-03-17 03:39:33,351] [pool-1-thread-12] Initializing /data/venu/VENU_Eight.TIF: [testng] 03:39:33,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:39:33,352 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:33,352 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-17_03-39-33.log] [testng] 03:39:33,353 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cae4191 - End of configuration. [testng] [2025-03-17 03:39:36,973] [pool-1-thread-11] Initializing /data/venu/VENU01.IMG: [testng] 03:39:36,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:39:36,974 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:36,975 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-17_03-39-36.log] [testng] 03:39:36,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19417eca - End of configuration. [testng] [2025-03-17 03:39:38,615] [pool-1-thread-10] Initializing /data/venu/VENU_Six.TIF: [testng] 03:39:38,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:39:38,616 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:38,616 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-17_03-39-38.log] [testng] 03:39:38,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7206007 - End of configuration. [testng] [2025-03-17 03:39:42,140] [pool-1-thread-9] Initializing /data/venu/VENU_Four.TIF: [testng] 03:39:42,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:39:42,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:42,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-17_03-39-42.log] [testng] 03:39:42,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5472fdc5 - End of configuration. [testng] [2025-03-17 03:39:46,851] [pool-1-thread-8] Initializing /data/venu/VENU01.TIF: [testng] 03:39:46,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:39:46,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:46,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-17_03-39-46.log] [testng] 03:39:46,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53f134af - End of configuration. [testng] [2025-03-17 03:39:53,161] [pool-1-thread-7] Initializing /data/venu/VENU_Five.TIF: [testng] 03:39:53,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:39:53,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:39:53,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-17_03-39-53.log] [testng] 03:39:53,163 |-INFO in ch.qos.logback.core.sift.SiftProcessor@285a44c7 - End of configuration. [testng] [2025-03-17 03:40:02,677] [pool-1-thread-6] Initializing /data/venu/VENU_Seven.TIF: [testng] 03:40:02,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:40:02,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:40:02,678 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-17_03-40-02.log] [testng] 03:40:02,679 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f62268b - End of configuration. [testng] [2025-03-17 03:40:12,270] [pool-1-thread-5] Initializing /data/steffen/Batman_008.tif: [testng] 03:40:12,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:40:12,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:40:12,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-17_03-40-12.log] [testng] 03:40:12,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36f176de - End of configuration. [testng] [2025-03-17 03:40:21,330] [pool-1-thread-4] Initializing /data/qa-4264/08.51.17 CCD Acquire-Acquire CCD Image Display-Acquire CCD -0.tif: [testng] 03:40:21,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:40:21,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:40:21,331 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-17_03-40-21.log] [testng] 03:40:21,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@169a8fea - End of configuration. [testng] [2025-03-17 03:40:25,457] [pool-1-thread-3] Initializing /data/qa-11061/Tile_020-009-000_0.tif: [testng] 03:40:25,457 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:40:25,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:40:25,458 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-17_03-40-25.log] [testng] 03:40:25,459 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f112a48 - End of configuration. [testng] [2025-03-17 03:40:32,855] [pool-1-thread-2] Initializing /data/venu/VENU02.TIF: [testng] 03:40:32,856 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:40:32,856 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:40:32,856 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-17_03-40-32.log] [testng] 03:40:32,857 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a8d2915 - End of configuration. [testng] [2025-03-17 03:40:57,831] [pool-1-thread-11] Initializing /data/venu/VENU03.IMG: [testng] [2025-03-17 03:41:17,830] [pool-1-thread-11] Initializing /data/peter/ZC_PTCS_ED_1000x_002.tif: [testng] [2025-03-17 03:41:21,885] [pool-1-thread-1] Initializing /data/qa-10514/TITAN_FEI_TIFF_Test_Image.tif: [testng] [2025-03-17 03:41:28,994] [pool-1-thread-10] Initializing /data/venu/VENU02.IMG: [testng] [2025-03-17 03:41:32,078] [pool-1-thread-3] Initializing /data/venu/VENU.TIF: [testng] [2025-03-17 03:41:37,539] [pool-1-thread-12] Initializing /data/venu/VENU03.TIF: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 4 minutes 34 seconds Finished: SUCCESS