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Started by upstream project "BIOFORMATS-test-repo" build number 384
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4
[BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins10640650198291267174.sh
+ '[' specs = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_60709_merge_ci -v /uod/idr/repos/curated/specs:/data -v /uod/idr-scratch/merge-ci/curated/specs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 12:07:37,325 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
   [testng] 12:07:37,326 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service.
   [testng] 12:07:37,326 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 12:07:37,327 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 12:07:37,328 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 12:07:37,328 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 12:07:37,329 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 12:07:37,329 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 12:07:37,329 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 12:07:37,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 12:07:37,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 12:07:37,330 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 12:07:37,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 12:07:37,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 12:07:37,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 12:07:37,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 12:07:37,547 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 12:07:37,547 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 12:07:37,547 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 12:07:37,547 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 12:07:37,547 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration.
   [testng] 12:07:37,548 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point
   [testng] 12:07:37,548 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 219 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2025-03-19 12:07:37,556] [main] java.version = 17.0.2
   [testng] 12:07:37,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 12:07:37,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:07:37,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-19_12-07-37.log]
   [testng] 12:07:37,602 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration.
   [testng] [2025-03-19 12:07:37,604] [main] testng.directory = /data
   [testng] [2025-03-19 12:07:37,604] [main] testng.configDirectory = /config
   [testng] [2025-03-19 12:07:37,612] [main] testng.multiplier = 1.0
   [testng] [2025-03-19 12:07:37,613] [main] testng.in-memory = false
   [testng] [2025-03-19 12:07:37,613] [main] testng.allow-missing = false
   [testng] [2025-03-19 12:07:37,613] [main] user.language = en
   [testng] [2025-03-19 12:07:37,613] [main] user.country = ${user.country}
   [testng] [2025-03-19 12:07:37,613] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2025-03-19 12:15:27,304] [main] ----------------------------------------
   [testng] [2025-03-19 12:15:27,304] [main] Total files: 226
   [testng] [2025-03-19 12:15:27,304] [main] Scan time: 469.69 s (2078 ms/file)
   [testng] [2025-03-19 12:15:27,304] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 28 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2025-03-19 12:22:29,048] [pool-1-thread-1] Initializing /data/iplab/16Bit XRay.IPL: 
   [testng] 12:22:29,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 12:22:29,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:29,050 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-19_12-22-29.log]
   [testng] 12:22:29,050 |-INFO in ch.qos.logback.core.sift.SiftProcessor@599eda89 - End of configuration.
   [testng] [2025-03-19 12:22:29,185] [pool-1-thread-12] Initializing /data/fluoview/Sample_XYZ.TIF: 
   [testng] 12:22:29,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 12:22:29,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:29,186 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-19_12-22-29.log]
   [testng] 12:22:29,186 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e5b8cb5 - End of configuration.
   [testng] [2025-03-19 12:22:30,091] [pool-1-thread-11] Initializing /data/fluoview/Sample_XYT.TIF: 
   [testng] 12:22:30,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 12:22:30,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:30,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-19_12-22-30.log]
   [testng] 12:22:30,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76e036a6 - End of configuration.
   [testng] [2025-03-19 12:22:30,942] [pool-1-thread-10] Initializing /data/iplab/Blend_Final.IPL: 
   [testng] 12:22:30,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 12:22:30,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:30,943 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-19_12-22-30.log]
   [testng] 12:22:30,943 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f2cc012 - End of configuration.
   [testng] [2025-03-19 12:22:31,094] [pool-1-thread-9] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-1.lsm: 
   [testng] 12:22:31,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 12:22:31,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:31,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-19_12-22-31.log]
   [testng] 12:22:31,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79caa6f3 - End of configuration.
   [testng] [2025-03-19 12:22:32,018] [pool-1-thread-8] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-2.lsm: 
   [testng] 12:22:32,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 12:22:32,018 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:32,018 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-19_12-22-32.log]
   [testng] 12:22:32,019 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e25a766 - End of configuration.
   [testng] [2025-03-19 12:22:32,916] [pool-1-thread-7] Initializing /data/fluoview/SpineAnimation.tif: 
   [testng] 12:22:32,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 12:22:32,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:32,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-19_12-22-32.log]
   [testng] 12:22:32,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cf6da95 - End of configuration.
   [testng] [2025-03-19 12:22:33,828] [pool-1-thread-6] Initializing /data/fluoview/Sample_XT.tif: 
   [testng] 12:22:33,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 12:22:33,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:33,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-19_12-22-33.log]
   [testng] 12:22:33,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ccb10f - End of configuration.
   [testng] [2025-03-19 12:22:34,592] [pool-1-thread-5] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test.dm3: 
   [testng] 12:22:34,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 12:22:34,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:34,593 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-19_12-22-34.log]
   [testng] 12:22:34,593 |-INFO in ch.qos.logback.core.sift.SiftProcessor@727a1e7a - End of configuration.
   [testng] [2025-03-19 12:22:34,742] [pool-1-thread-4] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile--MultiTrack-1.lsm: 
   [testng] 12:22:34,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 12:22:34,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:34,742 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-19_12-22-34.log]
   [testng] 12:22:34,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c7c5a98 - End of configuration.
   [testng] [2025-03-19 12:22:35,326] [pool-1-thread-3] Initializing /data/iplab/3t3 Cell.IPL: 
   [testng] 12:22:35,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 12:22:35,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:35,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-19_12-22-35.log]
   [testng] 12:22:35,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19bd362f - End of configuration.
   [testng] [2025-03-19 12:22:35,447] [pool-1-thread-2] Initializing /data/iplab/Chromosomes.IPL: 
   [testng] 12:22:35,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 12:22:35,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 12:22:35,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-19_12-22-35.log]
   [testng] 12:22:35,448 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ddf2612 - End of configuration.
   [testng] [2025-03-19 12:22:38,011] [pool-1-thread-2] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/test3.dm3: 
   [testng] [2025-03-19 12:22:38,210] [pool-1-thread-3] Initializing /data/iplab/Color Histology.IPL: 
   [testng] [2025-03-19 12:22:38,345] [pool-1-thread-1] Initializing /data/iplab/10x Blood and Bacteria.IPL: 
   [testng] [2025-03-19 12:22:38,486] [pool-1-thread-5] Initializing /data/iplab/Blend_Fitc.IPL: 
   [testng] [2025-03-19 12:22:38,600] [pool-1-thread-10] Initializing /data/iplab/Color Image.IPL: 
   [testng] [2025-03-19 12:22:40,172] [pool-1-thread-10] Initializing /data/fluoview/SpineAnimation.avi: 
   [testng] [2025-03-19 12:22:40,357] [pool-1-thread-3] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test2.dm3: 
   [testng] [2025-03-19 12:22:40,527] [pool-1-thread-2] Initializing /data/fluoview/Sample_ThreeCH.TIF: 
   [testng] [2025-03-19 12:22:41,201] [pool-1-thread-5] Initializing /data/fluoview/sample_labled_XYZTCh.tif: 
   [testng] [2025-03-19 12:22:41,789] [pool-1-thread-1] Initializing /data/iplab/Blend_DIC.IPL: 
   [testng] [2025-03-19 12:22:41,906] [pool-1-thread-11] Initializing /data/iplab/Blend_Tritc.IPL: 
   [testng] [2025-03-19 12:22:41,971] [pool-1-thread-12] Initializing /data/fluoview/sample_labled_XYZCh.tif: 
   [testng] [2025-03-19 12:22:42,359] [pool-1-thread-7] Initializing /data/fluoview/sample_labled_XYTCh.tif: 
   [testng] [2025-03-19 12:22:42,773] [pool-1-thread-6] Initializing /data/fluoview/Sample_TwoCH.TIF: 
   [testng] [2025-03-19 12:22:43,933] [pool-1-thread-3] Initializing /data/iplab/Actin.IPL: 
   [testng] [2025-03-19 12:22:44,493] [pool-1-thread-10] Initializing /data/iplab/Blend_Dapi.IPL: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1484, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 15 minutes 15 seconds
Finished: SUCCESS