![[Jenkins]](/jenkins/static/316c2b55/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 385 originally caused by: Started by upstream project "Trigger" build number 406 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins15833513343021351836.sh + '[' metamorph = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_60932_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:00:51,670 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 04:00:51,672 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - No custom configurators were discovered as a service. [testng] 04:00:51,672 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:00:51,673 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:00:51,673 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:00:51,673 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:00:51,674 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:00:51,674 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:00:51,674 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:00:51,675 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:00:51,675 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:00:51,675 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:00:51,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:00:51,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:00:51,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:00:51,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:00:51,849 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:00:51,849 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:00:51,850 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:00:51,850 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:00:51,850 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@4310d43 - End of configuration. [testng] 04:00:51,851 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1b11171f - Registering current configuration as safe fallback point [testng] 04:00:51,851 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 177 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-20 04:00:51,859] [main] java.version = 21 [testng] 04:00:51,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:00:51,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:00:51,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-20_04-00-51.log] [testng] 04:00:51,902 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69504ae9 - End of configuration. [testng] [2025-03-20 04:00:51,904] [main] testng.directory = /data [testng] [2025-03-20 04:00:51,904] [main] testng.configDirectory = /config [testng] [2025-03-20 04:00:51,912] [main] testng.multiplier = 1.0 [testng] [2025-03-20 04:00:51,912] [main] testng.in-memory = false [testng] [2025-03-20 04:00:51,912] [main] testng.allow-missing = false [testng] [2025-03-20 04:00:51,913] [main] user.language = en [testng] [2025-03-20 04:00:51,913] [main] user.country = ${user.country} [testng] [2025-03-20 04:00:51,913] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-20 05:16:01,299] [main] ---------------------------------------- [testng] [2025-03-20 05:16:01,299] [main] Total files: 14121 [testng] [2025-03-20 05:16:01,299] [main] Scan time: 4509.386 s (319 ms/file) [testng] [2025-03-20 05:16:01,300] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 261 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-20 07:20:27,647] [pool-1-thread-1] Initializing /data/chris/exp1_w2CSU RED_s3_t003.stk: [testng] 07:20:27,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 07:20:27,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:20:27,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-20_07-20-27.log] [testng] 07:20:27,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f14c8a7 - End of configuration. [testng] [2025-03-20 07:20:35,308] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: [testng] 07:20:35,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 07:20:35,308 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:20:35,309 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-20_07-20-35.log] [testng] 07:20:35,309 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6efbc218 - End of configuration. [testng] [2025-03-20 07:20:56,866] [pool-1-thread-11] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: [testng] 07:20:56,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 07:20:56,866 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:20:56,867 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-20_07-20-56.log] [testng] 07:20:56,867 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42ee55a - End of configuration. [testng] [2025-03-20 07:21:06,690] [pool-1-thread-10] Initializing /data/heiko/sample_3x3.stk: [testng] 07:21:06,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 07:21:06,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:21:06,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-20_07-21-06.log] [testng] 07:21:06,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13bf279d - End of configuration. [testng] [2025-03-20 07:21:13,682] [pool-1-thread-9] Initializing /data/imagesc-wafle-2020-08-18/2020-07-31 BB3084 MT3 DAY 4 reactivation/BB3084 in MT3_1_w1SDC488_s1_t1.stk: [testng] 07:21:13,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 07:21:13,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:21:13,684 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-20_07-21-13.log] [testng] 07:21:13,684 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7669387c - End of configuration. [testng] [2025-03-20 07:21:46,730] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t1.TIF: [testng] 07:21:46,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 07:21:46,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:21:46,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-20_07-21-46.log] [testng] 07:21:46,731 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fae2279 - End of configuration. [testng] [2025-03-20 07:22:00,190] [pool-1-thread-8] Used files list does not include base file [testng] [2025-03-20 07:22:00,192] [pool-1-thread-7] Initializing /data/bill/OX218B3/OX218B3_w1488nm- 30-_t1.STK: [testng] 07:22:00,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 07:22:00,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:22:00,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-20_07-22-00.log] [testng] 07:22:00,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4953dce9 - End of configuration. [testng] [2025-03-20 07:22:19,143] [pool-1-thread-6] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t2.TIF: [testng] 07:22:19,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 07:22:19,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:22:19,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-20_07-22-19.log] [testng] 07:22:19,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@189924ac - End of configuration. [testng] [2025-03-20 07:22:35,874] [pool-1-thread-6] Used files list does not include base file [testng] [2025-03-20 07:22:35,877] [pool-1-thread-5] Initializing /data/chris/Stream-2(partial).stk: [testng] 07:22:35,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 07:22:35,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:22:35,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-20_07-22-35.log] [testng] 07:22:35,878 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42da4a4b - End of configuration. [testng] [2025-03-20 07:22:54,320] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.jpg: [testng] 07:22:54,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 07:22:54,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:22:54,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-20_07-22-54.log] [testng] 07:22:54,322 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5440e1e1 - End of configuration. [testng] [2025-03-20 07:22:55,606] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w3Filter TRITC.jpg: [testng] 07:22:55,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 07:22:55,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:22:55,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-20_07-22-55.log] [testng] 07:22:55,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48de8770 - End of configuration. [testng] [2025-03-20 07:22:56,921] [pool-1-thread-2] Initializing /data/tristan/data IJM/mw1_z/MDA_z_MW1(GFP)_w1GFP.TIF: [testng] 07:22:56,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 07:22:56,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:22:56,922 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-20_07-22-56.log] [testng] 07:22:56,922 |-INFO in ch.qos.logback.core.sift.SiftProcessor@287b598b - End of configuration. [testng] [2025-03-20 07:23:37,869] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish7_w1FRET_s1_t1.TIF: [testng] [2025-03-20 07:24:30,988] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-3.tif: [testng] [2025-03-20 07:24:57,111] [pool-1-thread-1] Initializing /data/josh/2101to400bstk.stk: [testng] [2025-03-20 07:28:13,615] [pool-1-thread-10] Initializing /data/heiko/metadata_3x3.jpg: [testng] [2025-03-20 07:28:28,700] [pool-1-thread-2] Initializing /data/sebastien-besson/new/120711_D2_001/120711_D2_001_w1DUAL 491-561_t1.TIF: [testng] [2025-03-20 07:28:42,201] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine-2.tif: [testng] [2025-03-20 07:28:56,042] [pool-1-thread-10] Initializing /data/qa-16915/m-02-488.ome.tif: [testng] [2025-03-20 07:29:22,138] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish3_w1FRET_t1.TIF: [testng] [2025-03-20 07:29:43,118] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 07:30:18,259] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w2Filter FITC.TIF: [testng] [2025-03-20 07:30:27,753] [pool-1-thread-4] Initializing /data/andressa/RPE/Full Confluency/Serum/Color Combine.tif: [testng] [2025-03-20 07:31:16,241] [pool-1-thread-10] Initializing /data/ascb/monopolar mt aim.tif: [testng] [2025-03-20 07:31:32,922] [pool-1-thread-4] Initializing /data/ascb/mt prc1 kif4 2.tif: [testng] [2025-03-20 07:32:02,351] [pool-1-thread-6] Initializing /data/strand/TS_200nm_3_w2Fluo GFP -100-.TIF: [testng] [2025-03-20 07:32:12,549] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 07:32:37,670] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w1Filter DAPI.TIF: [testng] [2025-03-20 07:33:10,849] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF: [testng] [2025-03-20 07:33:25,974] [pool-1-thread-10] Used files list does not include base file [testng] [2025-03-20 07:33:25,975] [pool-1-thread-4] Initializing /data/samples/single-series-test/test_w1.TIF: [testng] [2025-03-20 07:34:07,561] [pool-1-thread-8] Initializing /data/alex/48h/48h_siGW25_w2FITC.TIF: [testng] [2025-03-20 07:34:43,457] [pool-1-thread-6] Initializing /data/jerome/deconv.STK: [testng] [2025-03-20 07:34:57,848] [pool-1-thread-4] Initializing /data/bill/FromBillM_New_MM_MDAdata/RWeD62u7dF1Mom1_w1CelegansDIC 100x_t1.TIF: [testng] [2025-03-20 07:35:49,148] [pool-1-thread-6] Initializing /data/mike/TEST 1_7_w2EN GFP_s1_t61.STK: [testng] [2025-03-20 07:36:12,093] [pool-1-thread-8] Initializing /data/sebastian/CLC2_GFP root4/0.1% DMSO root4001.tif: [testng] [2025-03-20 07:36:59,478] [pool-1-thread-6] Initializing /data/alex/15/LJN_Y1136_15_w2DAPI_t2.STK: [testng] [2025-03-20 07:37:20,016] [pool-1-thread-8] Initializing /data/chris/exp1_w2CSU RED_s3_t001.stk: [testng] [2025-03-20 07:38:17,705] [pool-1-thread-8] Initializing /data/josh/2101to600f.stk: [testng] [2025-03-20 07:40:53,338] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 07:41:12,378] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w3Filter TRITC.TIF: [testng] [2025-03-20 07:41:43,007] [pool-1-thread-6] Initializing /data/ascb/mt aim.tif: [testng] [2025-03-20 07:42:14,722] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t1.TIF: [testng] [2025-03-20 07:42:27,522] [pool-1-thread-7] Used files list does not include base file [testng] [2025-03-20 07:42:39,365] [pool-1-thread-6] Initializing /data/ascb/golgi marker.tif: [testng] [2025-03-20 07:42:52,301] [pool-1-thread-4] Initializing /data/samples/10xcalib.tif: [testng] [2025-03-20 07:43:38,583] [pool-1-thread-6] Initializing /data/samples/test-plate/test_s10_t1.tif: [testng] [2025-03-20 07:44:24,287] [pool-1-thread-4] Initializing /data/olivier/01/CDYL_D0_frap_100x_01_w1491-DOUBLE-GFP-DsRed_t1.TIF: [testng] [2025-03-20 07:48:40,902] [pool-1-thread-7] Initializing /data/fabrice/100722ac-2_w1RED_s1_t1.TIF: [testng] [2025-03-20 07:48:49,767] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish8_w1FRET_s1_t1.TIF: [testng] [2025-03-20 07:50:40,271] [pool-1-thread-7] Initializing /data/grant/XYZ_Image.STK: [testng] [2025-03-20 07:51:33,184] [pool-1-thread-8] Initializing /data/jcb/201008090/3T3_ShhN_C_Chh488.stk: [testng] [2025-03-20 07:52:08,160] [pool-1-thread-7] Initializing /data/samples/zserEight.stk: [testng] [2025-03-20 07:52:46,536] [pool-1-thread-8] Initializing /data/ascb/golgi marker 2.tif: [testng] [2025-03-20 07:53:10,068] [pool-1-thread-7] Initializing /data/josh/EditedMovies/2101to600a.stk: [testng] [2025-03-20 07:55:28,897] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 08:06:45,095] [pool-1-thread-7] Initializing /data/ascb/C9 Stack.tif: [testng] [2025-03-20 08:07:54,703] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF: [testng] [2025-03-20 08:08:11,168] [pool-1-thread-7] Used files list does not include base file [testng] [2025-03-20 08:08:12,894] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 08:12:48,800] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w2Filter FITC.TIF: [testng] [2025-03-20 08:12:57,604] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish4_w1FRET_s1_t1.TIF: [testng] [2025-03-20 08:14:30,751] [pool-1-thread-5] Initializing /data/qa-16915/m-01-561.ome.tif: [testng] [2025-03-20 08:14:42,233] [pool-1-thread-7] Initializing /data/ved/Expt01_w1CFP FRET-S ND0.5_t1.TIF: [testng] [2025-03-20 08:15:06,668] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 08:15:39,277] [pool-1-thread-5] Initializing /data/jcb/201008090/3T3_ShhN_C_DIC.stk: [testng] [2025-03-20 08:16:31,703] [pool-1-thread-5] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t41_w1Laser4054BD4BP_t1.stk: [testng] [2025-03-20 08:20:01,507] [pool-1-thread-7] Initializing /data/benedikt/LosslessCompressedSTK.stk: [testng] [2025-03-20 08:20:57,090] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 08:22:21,213] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: [testng] [2025-03-20 08:22:33,837] [pool-1-thread-10] Initializing /data/jcb/201008090/3T3_ShhN_C_Nhh594.stk: [testng] [2025-03-20 08:23:18,203] [pool-1-thread-7] Initializing /data/ascb/RNA dye MT 2.tif: [testng] [2025-03-20 08:23:36,089] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w2Laser4914BD4BP_OverView.tif: [testng] [2025-03-20 08:23:46,058] [pool-1-thread-10] Used files list does not include base file [testng] [2025-03-20 08:24:12,629] [pool-1-thread-7] Initializing /data/ascb/mt mklp1.tif: [testng] [2025-03-20 08:25:08,780] [pool-1-thread-7] Initializing /data/qa-16887/m-01.tif: [testng] [2025-03-20 08:25:37,940] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 08:26:39,825] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish3_w1FRET_s1_t1.TIF: [testng] [2025-03-20 08:28:20,540] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 08:31:03,499] [pool-1-thread-9] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment3_w1CFP-YFP FRET 446.TIF: [testng] [2025-03-20 08:33:09,357] [pool-1-thread-9] Initializing /data/aaron/metamorph.stk: [testng] [2025-03-20 08:34:01,959] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 08:37:45,535] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t1.TIF: [testng] [2025-03-20 08:37:59,922] [pool-1-thread-8] Used files list does not include base file [testng] [2025-03-20 08:45:18,488] [pool-1-thread-8] Initializing /data/andressa/RPE/Sparse/Serum/Color Combine.tif: [testng] [2025-03-20 08:46:25,254] [pool-1-thread-8] Initializing /data/ascb/mt racgap1 dna.tif: [testng] [2025-03-20 08:47:23,496] [pool-1-thread-8] Initializing /data/sebastien-besson/new/04/04_w1Both lasers_t1.TIF: [testng] [2025-03-20 08:49:58,725] [pool-1-thread-12] Initializing /data/lee/20130116-u2os-celldensitytest-72h-96h_m08_s9_w2766e46f1-81be-45a2-88b1-abe8da58c47a.tif: [testng] 08:50:34,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:50:34,724 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:50:34,725 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-20_08-50-34.log] [testng] 08:50:34,725 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17a4b29 - End of configuration. [testng] [2025-03-20 08:50:46,857] [pool-1-thread-12] Initializing /data/gh-2613/ScanSlide_exp1_rep1_w1confGFP_s1.stk: [testng] [2025-03-20 08:54:51,646] [pool-1-thread-12] Initializing /data/thomas/test.tif: [testng] [2025-03-20 08:55:51,917] [pool-1-thread-12] Initializing /data/chris/Foo/exp1_w1_s1_t1.tif: [testng] [2025-03-20 08:58:49,756] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 09:01:43,684] [pool-1-thread-5] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t2.TIF: [testng] [2025-03-20 09:01:57,859] [pool-1-thread-5] Used files list does not include base file [testng] [2025-03-20 09:05:21,458] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR5_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF: [testng] [2025-03-20 09:06:41,778] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 09:11:23,387] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish2_w1FRET_s1_t1.TIF: [testng] [2025-03-20 09:17:47,951] [pool-1-thread-4] Initializing /data/alex/13/LJN_Y1136_13_w2FITC_t2.STK: [testng] [2025-03-20 09:20:10,750] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 09:22:31,807] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w3Filter TRITC.TIF: [testng] [2025-03-20 09:23:52,982] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge.TIF: [testng] [2025-03-20 09:25:54,261] [pool-1-thread-8] Initializing /data/samples/zseries.stk: [testng] [2025-03-20 09:26:56,481] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish5_w1FRET_s1_t1.TIF: [testng] [2025-03-20 09:42:17,625] [pool-1-thread-2] Initializing /data/tristan/data IJM/mw2/MDA_mw2(GFP-RFP)_w1GFP.TIF: [testng] [2025-03-20 09:44:50,403] [pool-1-thread-2] Initializing /data/josh/2101to600e.stk: [testng] [2025-03-20 09:49:14,983] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish10_w1FRET_s1_t1.TIF: [testng] [2025-03-20 09:51:02,602] [pool-1-thread-5] Initializing /data/josh/EditedMovies/2101to400b.stk: [testng] [2025-03-20 09:57:58,044] [pool-1-thread-5] Initializing /data/josh/EditedMovies/2101to600e.stk: [testng] [2025-03-20 09:59:33,704] [pool-1-thread-4] Initializing /data/chris-de-graffenried/2011-05-30/ND C4 488 PLK 5682_w1sRFP.stk: [testng] [2025-03-20 10:00:21,208] [pool-1-thread-5] Initializing /data/sebastien-besson/001/120119_VimMito_001_w1DIC_t1.TIF: [testng] [2025-03-20 10:02:01,820] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/Color Combine.tif: [testng] [2025-03-20 10:02:34,719] [pool-1-thread-4] Initializing /data/thomas/t_test2001.tif: [testng] [2025-03-20 10:03:08,440] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 10:08:51,214] [pool-1-thread-3] Initializing /data/heiko/sample_2x2.stk: [testng] [2025-03-20 10:09:17,066] [pool-1-thread-3] Initializing /data/andressa/RPE/Full Confluency/Collagen/Color Combine 2.tif: [testng] [2025-03-20 10:09:42,945] [pool-1-thread-3] Initializing /data/tristan/data IJM/tl_ z/MDA_TL_z_t1.TIF: [testng] [2025-03-20 10:10:42,115] [pool-1-thread-3] Initializing /data/josh/EditedMovies/2101to600b.stk: [testng] [2025-03-20 10:13:37,863] [pool-1-thread-3] Initializing /data/cumol-test-series/23.001: [testng] [2025-03-20 10:15:58,247] [pool-1-thread-3] Initializing /data/chris/test2_w2_s1_t1.stk: [testng] [2025-03-20 10:16:22,805] [pool-1-thread-3] Initializing /data/grant/X.STK: [testng] [2025-03-20 10:17:01,499] [pool-1-thread-3] Initializing /data/qa-16915/m-04-561.tif: [testng] [2025-03-20 10:17:28,971] [pool-1-thread-3] Initializing /data/alex/Selected FITC.stk: [testng] [2025-03-20 10:17:50,895] [pool-1-thread-3] Initializing /data/tristan/data IJM/mw1/MDA_mw1(GFP)_w1GFP.TIF: [testng] [2025-03-20 10:18:23,130] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s4t41_w1Laser4054BD4BP_s1_t1.stk: [testng] [2025-03-20 10:20:07,210] [pool-1-thread-1] Initializing /data/dan/CavAlpha1D_51490_engG4_F_101111_1.tif: [testng] [2025-03-20 10:20:30,302] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-4.tif: [testng] [2025-03-20 10:20:53,818] [pool-1-thread-1] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF: [testng] [2025-03-20 10:22:25,457] [pool-1-thread-4] Initializing /data/qa-16915/m-04.tif: [testng] [2025-03-20 10:22:49,247] [pool-1-thread-4] Initializing /data/tristan/data IJM/mw3_z/MDA_z_MW3(GFP_RFP_GLP)_w3GLP.TIF: [testng] 10:23:26,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 10:23:26,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:23:26,752 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-20_10-23-26.log] [testng] 10:23:26,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@149c8695 - End of configuration. [testng] [2025-03-20 10:23:41,858] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 10:25:28,426] [pool-1-thread-3] Initializing /data/doil/001-23 dapi.stk: [testng] [2025-03-20 10:28:33,666] [pool-1-thread-1] Initializing /data/qa-16915/m-02.tif: [testng] [2025-03-20 10:28:37,899] [pool-1-thread-3] Initializing /data/andressa/RPE/Sparse/Fibronectin/Color Combine.tif: [testng] [2025-03-20 10:28:58,003] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish4_w1FRET_t1.TIF: [testng] [2025-03-20 10:29:07,681] [pool-1-thread-1] Initializing /data/imagesc-39526/20200622_GDF9_D21_MT Ovary_1/MT_Ovary-11_w1conf640_s1.stk: [testng] [2025-03-20 10:29:12,520] [pool-1-thread-11] Initializing /data/jcb/201007118/si133_J3_5_w18- 30- GFP_t1.STK: [testng] [2025-03-20 10:30:43,178] [pool-1-thread-8] Initializing /data/qa-16915/m-02-561.ome.tif: [testng] [2025-03-20 10:31:01,649] [pool-1-thread-8] Initializing /data/jcb/201008090/Color Combine.stk: [testng] [2025-03-20 10:31:24,041] [pool-1-thread-8] Initializing /data/dave/Z Series.stk: [testng] [2025-03-20 10:31:28,059] [pool-1-thread-1] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF: [testng] [2025-03-20 10:31:44,916] [pool-1-thread-8] Initializing /data/ascb/mt prc1 kif4 1.tif: [testng] [2025-03-20 10:32:01,192] [pool-1-thread-1] Initializing /data/andressa/RPE/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 10:32:07,706] [pool-1-thread-8] Initializing /data/qa-16915/m-01-488.ome.tif: [testng] [2025-03-20 10:32:26,929] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 10:32:58,609] [pool-1-thread-1] Initializing /data/qa-31304/Well _C6_1.tif: [testng] [2025-03-20 10:33:19,798] [pool-1-thread-1] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/Color Combine.tif: [testng] [2025-03-20 10:33:41,761] [pool-1-thread-1] Initializing /data/stephane/Lame7-E5-Y+-001.stk: [testng] [2025-03-20 10:34:03,670] [pool-1-thread-1] Initializing /data/graham/G_Wright raw.stk: [testng] [2025-03-20 10:34:22,755] [pool-1-thread-1] Initializing /data/andressa/RPE/Sparse/Collagen/Color Combine.tif: [testng] [2025-03-20 10:34:30,881] [pool-1-thread-7] Initializing /data/samples/zser24.stk: [testng] [2025-03-20 10:34:47,719] [pool-1-thread-1] Initializing /data/josh/2101to800.stk: [testng] [2025-03-20 10:35:05,394] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 10:37:16,871] [pool-1-thread-1] Initializing /data/sebastien-besson/002/120119_VimMito_002_w1DIC_t1.TIF: [testng] [2025-03-20 10:43:32,065] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 10:54:57,798] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1B_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF: [testng] [2025-03-20 10:56:35,826] [pool-1-thread-3] Initializing /data/pang/z-stack/Z Series.tif: [testng] [2025-03-20 10:56:58,916] [pool-1-thread-3] Initializing /data/qa-16915/m-01.tif: [testng] [2025-03-20 10:57:28,014] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 11:00:09,768] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 11:01:13,809] [pool-1-thread-8] Initializing /data/alex/14/LJN_Y1136_14_w2FITC_t2.STK: [testng] [2025-03-20 11:02:36,149] [pool-1-thread-8] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment4_w1CFP-YFP FRET 446.TIF: [testng] [2025-03-20 11:03:13,525] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s1t11_w1Laser4054BD4BP.tif: [testng] [2025-03-20 11:04:09,979] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish9_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:04:40,277] [pool-1-thread-7] Initializing /data/sebastien-besson/plk1/plk1_561nm_eb3_3_t1.TIF: [testng] [2025-03-20 11:04:53,386] [pool-1-thread-10] Initializing /data/sebastien-besson/A._WTChlor.2.nd_[Stage1__Position52_]/A. WTChlor.2_w20 Brightfield_s4.TIF: [testng] [2025-03-20 11:05:23,494] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 11:06:24,805] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 11:08:19,255] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 11:08:39,974] [pool-1-thread-10] Initializing /data/josh/EditedMovies/2101to800.stk: [testng] [2025-03-20 11:09:17,476] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.tif: [testng] [2025-03-20 11:09:45,510] [pool-1-thread-4] Initializing /data/andressa/RPE/Sparse/Serum/120806_2_w1Filter DAPI.TIF: [testng] [2025-03-20 11:10:10,775] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_4well/Dish1(ISO200nM)_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:11:01,162] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w1Laser4054BD4BP_OverView.tif: [testng] [2025-03-20 11:11:04,430] [pool-1-thread-4] Used files list does not include base file [testng] [2025-03-20 11:11:42,977] [pool-1-thread-4] Initializing /data/lee/397_w1447 laser_s17_t1_bad.TIF: [testng] [2025-03-20 11:12:03,612] [pool-1-thread-4] Initializing /data/david/tl4.tif: [testng] [2025-03-20 11:12:28,509] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Sparse/Collagen/Color Combine.tif: [testng] [2025-03-20 11:12:50,345] [pool-1-thread-4] Initializing /data/ascb/RNA dye MT.tif: [testng] [2025-03-20 11:13:11,164] [pool-1-thread-4] Initializing /data/josh/2101to600b.stk: [testng] [2025-03-20 11:14:39,987] [pool-1-thread-3] Initializing /data/sebastien/GA-2222 raf-1_w2Mono 475 nm.STK: [testng] [2025-03-20 11:14:58,030] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.TIF: [testng] [2025-03-20 11:15:15,673] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.jpg: [testng] [2025-03-20 11:15:23,990] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t11_w1Laser4054BD4BP.stk: [testng] [2025-03-20 11:15:58,199] [pool-1-thread-3] Initializing /data/josh/2101to600astk.stk: [testng] [2025-03-20 11:16:56,196] [pool-1-thread-4] Initializing /data/aaron/RR11_2 TRAINED mid lobIX 63X GFP568_s1.STK: [testng] [2025-03-20 11:17:11,281] [pool-1-thread-4] Initializing /data/grant/XYZC_Image_w1FITC.STK: [testng] [2025-03-20 11:17:49,732] [pool-1-thread-4] Initializing /data/chris/exp1_w1CSU GREEN_s3_t002.stk: [testng] [2025-03-20 11:18:04,075] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t2.TIF: [testng] [2025-03-20 11:18:07,737] [pool-1-thread-4] Used files list does not include base file [testng] [2025-03-20 11:18:12,967] [pool-1-thread-2] Initializing /data/ascb/mt prc1 kif4.tif: [testng] [2025-03-20 11:18:28,495] [pool-1-thread-2] Initializing /data/graham/G_Wright deconvolved.stk: [testng] [2025-03-20 11:18:42,792] [pool-1-thread-2] Initializing /data/ascb/C1 Stack.stk: [testng] [2025-03-20 11:19:01,140] [pool-1-thread-2] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c1s1t11_Laser4054BD4BP.stk: [testng] [2025-03-20 11:19:04,810] [pool-1-thread-2] Used files list does not include base file [testng] [2025-03-20 11:19:18,803] [pool-1-thread-7] Initializing /data/jmuhlich/rgb_w1_s1_t1.TIF: [testng] [2025-03-20 11:19:46,822] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_Vec_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: [testng] [2025-03-20 11:20:12,037] [pool-1-thread-4] Initializing /data/tristan/data IJM/mw3/MDA_MW3(GFP-RFP-GLP)_w1GFP.TIF: [testng] [2025-03-20 11:20:15,658] [pool-1-thread-9] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: [testng] [2025-03-20 11:20:23,186] [pool-1-thread-2] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 11:20:52,282] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Sparse/Serum/Color Combine.tif: [testng] [2025-03-20 11:21:03,408] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 11:21:06,323] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 11:21:20,399] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: [testng] [2025-03-20 11:21:32,471] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 11:22:13,191] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 11:24:49,582] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish6_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:25:20,752] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w2Filter FITC.TIF: [testng] [2025-03-20 11:25:45,815] [pool-1-thread-3] Initializing /data/chris/exp1_w1_s1_t1.tif: [testng] [2025-03-20 11:26:07,945] [pool-1-thread-3] Initializing /data/ascb/mt prc1 kif4 3.tif: [testng] [2025-03-20 11:26:29,415] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: [testng] [2025-03-20 11:34:27,541] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish2_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:35:47,557] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t1.TIF: [testng] [2025-03-20 11:35:51,978] [pool-1-thread-4] Used files list does not include base file [testng] [2025-03-20 11:36:13,476] [pool-1-thread-9] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2_001_w1DUAL 491-561_t1.TIF: [testng] [2025-03-20 11:36:55,593] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-20 11:37:36,672] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish6_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:38:28,042] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1F_ISOto5HT_4well/Dish5_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:40:39,317] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w1Laser4054BD4BP_OverView.tif: [testng] [2025-03-20 11:40:41,426] [pool-1-thread-3] Used files list does not include base file [testng] [2025-03-20 11:41:12,063] [pool-1-thread-3] Initializing /data/jmuhlich/metamorph_scan_rgb/Scan 20x obj 40_w1_s1_t1.TIF: [testng] [2025-03-20 11:42:13,920] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1F_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 11:48:20,494] [pool-1-thread-5] Initializing /data/jae/RGB_s34.tif: [testng] [2025-03-20 11:48:40,327] [pool-1-thread-5] Initializing /data/josh/2101to400astk.stk: [testng] [2025-03-20 11:50:19,045] [pool-1-thread-2] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment5_w1DUAL 491-561_t1.TIF: [testng] [2025-03-20 11:51:38,384] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish3_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:54:19,180] [pool-1-thread-3] Initializing /data/qa-30870/220209_posit5.tif: [testng] [2025-03-20 11:54:32,482] [pool-1-thread-3] Initializing /data/andressa/RPE/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 11:55:08,670] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_Vec_ISOto5HT_35mm/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 11:56:03,681] [pool-1-thread-12] Initializing /data/grant/Scale_bar_100um_XY_image.TIF: [testng] [2025-03-20 11:56:26,751] [pool-1-thread-12] Initializing /data/jacques/Repositionnement/Repositionnement_s1_t1.TIF: [testng] [2025-03-20 11:56:33,319] [pool-1-thread-2] Initializing /data/andressa/RPE/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 11:56:46,215] [pool-1-thread-11] Initializing /data/steve/Experiment2.stk: [testng] [2025-03-20 11:56:59,283] [pool-1-thread-11] Initializing /data/chris-de-graffenried/2011-11-01/DOX FAZ1 568 PLK 4881_w1Cy3.stk: [testng] [2025-03-20 11:57:10,176] [pool-1-thread-2] Initializing /data/samples/10xcalib.stk: [testng] [2025-03-20 11:57:24,328] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w1Filter DAPI.TIF: [testng] [2025-03-20 11:57:41,596] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine.tif: [testng] [2025-03-20 11:57:48,083] [pool-1-thread-11] Initializing /data/aaron/L15_CTRL_FC1d_416_Da1.stk: [testng] [2025-03-20 11:57:57,143] [pool-1-thread-2] Initializing /data/chris-de-graffenried/ND C4 488 PLK 5682_w1sRFP.stk: [testng] [2025-03-20 11:58:02,672] [pool-1-thread-11] Initializing /data/samples/diatoms3d.stk: [testng] [2025-03-20 11:58:04,681] [pool-1-thread-12] Initializing /data/chris/test2_w2_s1_t2.stk: [testng] [2025-03-20 11:58:15,467] [pool-1-thread-11] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t1.TIF: [testng] [2025-03-20 11:58:18,565] [pool-1-thread-11] Used files list does not include base file [testng] [2025-03-20 11:58:19,659] [pool-1-thread-12] Initializing /data/tristan/data IJM/tl/MDA_TL_t1.TIF: [testng] [2025-03-20 11:58:41,975] [pool-1-thread-2] Initializing /data/qa-17827/G28P2E10-2 x5.TIF: [testng] [2025-03-20 11:58:53,906] [pool-1-thread-12] Initializing /data/qa-16915/m-04-488.tif: [testng] [2025-03-20 11:58:57,614] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish4_w1FRET_s1_t1.TIF: [testng] [2025-03-20 11:59:31,526] [pool-1-thread-12] Initializing /data/josh/EditedMovies/2101to600f.stk: [testng] [2025-03-20 12:00:20,490] [pool-1-thread-11] Initializing /data/samples/zserSixteen.stk: [testng] [2025-03-20 12:00:32,084] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Sparse/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-20 12:01:04,056] [pool-1-thread-11] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk: [testng] [2025-03-20 12:01:06,086] [pool-1-thread-8] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif: [testng] [2025-03-20 12:01:08,421] [pool-1-thread-8] Used files list does not include base file [testng] [2025-03-20 12:01:15,044] [pool-1-thread-12] Initializing /data/lee/IXMtest_P24_s9_w560D948A4-4D16-49D0-9080-7575267498F9.tif: [testng] [2025-03-20 12:01:17,983] [pool-1-thread-11] Initializing /data/steve/Experiment2.tif: [testng] [2025-03-20 12:01:28,414] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-5.tif: [testng] [2025-03-20 12:01:32,926] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1A_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF: [testng] [2025-03-20 12:01:53,526] [pool-1-thread-8] Initializing /data/hms/HCT116_w1Phase FITC_s7_t1.TIF: [testng] [2025-03-20 12:02:02,337] [pool-1-thread-12] Initializing /data/chris/exp1_w1CSU GREEN_s3_t001.stk: [testng] [2025-03-20 12:02:13,819] [pool-1-thread-12] Initializing /data/gh-2613/ScanSlide_exp1_rep0_w1confGFP_s1.tif: [testng] [2025-03-20 12:02:30,629] [pool-1-thread-12] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t2.TIF: [testng] [2025-03-20 12:02:33,504] [pool-1-thread-12] Used files list does not include base file [testng] [2025-03-20 12:02:34,535] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 12:04:29,656] [pool-1-thread-12] Initializing /data/josh/EditedMovies/2101to400a.stk: [testng] [2025-03-20 12:05:26,399] [pool-1-thread-10] Initializing /data/jacek/YFP2trans.tif: [testng] [2025-03-20 12:05:44,822] [pool-1-thread-10] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c1s1t1.tif: [testng] [2025-03-20 12:06:10,451] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-20 12:06:32,152] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w2Filter FITC.TIF: [testng] [2025-03-20 12:06:45,139] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/Color Combine.tif: [testng] [2025-03-20 12:06:53,054] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w3Filter TRITC.TIF: [testng] [2025-03-20 12:07:06,065] [pool-1-thread-3] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t2.TIF: [testng] [2025-03-20 12:07:10,268] [pool-1-thread-3] Used files list does not include base file [testng] [2025-03-20 12:07:15,498] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_Vec_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF: [testng] [2025-03-20 12:09:07,858] [pool-1-thread-3] Initializing /data/imagesc-39526/bottom/956662_PVTom_L7day_4x_z10um_bottom_Region-1_nTiles-029_1_conf561_s1.stk: [testng] [2025-03-20 12:12:51,266] [pool-1-thread-3] Initializing /data/jayne/2celltest10fpstl65power.stk: [testng] [2025-03-20 12:13:12,997] [pool-1-thread-3] Initializing /data/qa-16907/1_w1Single SPI 405.TIF: [testng] [2025-03-20 12:13:48,600] [pool-1-thread-3] Initializing /data/grant/XYZCT_Image_w1FITC_t1.STK: Build was aborted Calling Pipeline was cancelled Calling Pipeline was cancelled Finished: ABORTED