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Started by upstream project "BIOFORMATS-test-repo" build number 386 originally caused by: Started by upstream project "Trigger" build number 408 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins13563248843376213917.sh + '[' cellsens = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_61113_merge_ci -v /uod/idr/repos/curated/cellsens:/data -v /uod/idr-scratch/merge-ci/curated/cellsens:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml compile-tests: [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [resolver:resolve] Resolving artifacts [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/metakit/5.8.9-SNAPSHOT/maven-metadata.xml [resolver:resolve] Downloading https://maven.imagej.net/content/groups/public/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/maven-metadata.xml [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:25:34,911 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:25:34,912 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - No custom configurators were discovered as a service. [testng] 00:25:34,912 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:25:34,913 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:25:34,914 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:25:34,914 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:25:34,914 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:25:34,914 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:25:34,915 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:25:34,915 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:25:34,915 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:25:34,916 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:25:35,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:25:35,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:25:35,082 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:25:35,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:25:35,088 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:25:35,088 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:25:35,088 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:25:35,089 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:25:35,089 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@4310d43 - End of configuration. [testng] 00:25:35,090 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1b11171f - Registering current configuration as safe fallback point [testng] 00:25:35,090 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 175 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-21 00:25:35,098] [main] java.version = 21 [testng] 00:25:35,101 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:25:35,101 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:35,142 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-21_00-25-35.log] [testng] 00:25:35,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69504ae9 - End of configuration. [testng] [2025-03-21 00:25:35,145] [main] testng.directory = /data [testng] [2025-03-21 00:25:35,145] [main] testng.configDirectory = /config [testng] [2025-03-21 00:25:35,153] [main] testng.multiplier = 1.0 [testng] [2025-03-21 00:25:35,154] [main] testng.in-memory = false [testng] [2025-03-21 00:25:35,154] [main] testng.allow-missing = false [testng] [2025-03-21 00:25:35,154] [main] user.language = en [testng] [2025-03-21 00:25:35,154] [main] user.country = ${user.country} [testng] [2025-03-21 00:25:35,154] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-21 00:30:36,100] [main] ---------------------------------------- [testng] [2025-03-21 00:30:36,100] [main] Total files: 134 [testng] [2025-03-21 00:30:36,100] [main] Scan time: 300.945 s (2245 ms/file) [testng] [2025-03-21 00:30:36,101] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 72 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-21 00:36:45,843] [pool-1-thread-1] Initializing /data/olivier/26-10-2014/Image_27_2.vsi: [testng] 00:36:45,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:36:45,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:45,845 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-21_00-36-45.log] [testng] 00:36:45,846 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6eced40f - End of configuration. [testng] [2025-03-21 00:36:48,884] [pool-1-thread-12] Initializing /data/anda/Image_01_V76 K2 11_lung.vsi: [testng] 00:36:48,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:36:48,884 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:48,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-21_00-36-48.log] [testng] 00:36:48,885 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cac353b - End of configuration. [testng] [2025-03-21 00:36:52,159] [pool-1-thread-11] Initializing /data/david/Image_normal_skin with hair/Image_normal_skin with hair.vsi: [testng] 00:36:52,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:36:52,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:52,160 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-21_00-36-52.log] [testng] 00:36:52,160 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18f35c17 - End of configuration. [testng] [2025-03-21 00:36:55,157] [pool-1-thread-10] Initializing /data/samples/Measurement & ROI/Oxyuranus_microlepidotus.tif: [testng] 00:36:55,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:36:55,158 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:36:55,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-21_00-36-55.log] [testng] 00:36:55,159 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c2005ba - End of configuration. [testng] [2025-03-21 00:37:01,913] [pool-1-thread-9] Initializing /data/gh-3859/Image_Test2.vsi: [testng] 00:37:01,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:37:01,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:01,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-21_00-37-01.log] [testng] 00:37:01,914 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59d5bc5f - End of configuration. [testng] [2025-03-21 00:37:05,282] [pool-1-thread-8] Initializing /data/samples/Fluorescence Unmixing/HeLa_GFP_only.tif: [testng] 00:37:05,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:37:05,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:05,282 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-21_00-37-05.log] [testng] 00:37:05,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73f8e11c - End of configuration. [testng] [2025-03-21 00:37:12,597] [pool-1-thread-7] Initializing /data/qa-11039/Image_01.vsi: [testng] 00:37:12,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:37:12,597 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:12,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-21_00-37-12.log] [testng] 00:37:12,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a123d1 - End of configuration. [testng] [2025-03-21 00:37:15,910] [pool-1-thread-6] Initializing /data/samples/Deconvolution/_islets_40X_2_/islets_40X_2.vsi: [testng] 00:37:15,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:37:15,910 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:15,910 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-21_00-37-15.log] [testng] 00:37:15,911 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73723949 - End of configuration. [testng] [2025-03-21 00:37:19,297] [pool-1-thread-5] Initializing /data/olivier/14-09-2012/Image_01.vsi: [testng] 00:37:19,297 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:37:19,297 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:19,298 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-21_00-37-19.log] [testng] 00:37:19,298 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a55bab - End of configuration. [testng] [2025-03-21 00:37:22,748] [pool-1-thread-4] Initializing /data/samples/Deconvolution/chroma liver 40x 8 planes.vsi: [testng] 00:37:22,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:37:22,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:22,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-21_00-37-22.log] [testng] 00:37:22,749 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d48cf2c - End of configuration. [testng] [2025-03-21 00:37:25,911] [pool-1-thread-3] Initializing /data/samples/Shading Correction/Micrometer Original.tif: [testng] 00:37:25,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:37:25,911 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:25,912 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-21_00-37-25.log] [testng] 00:37:25,912 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b6f9f89 - End of configuration. [testng] [2025-03-21 00:37:35,146] [pool-1-thread-2] Initializing /data/samples/Channels/svens cells - red.tif: [testng] 00:37:35,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:37:35,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:37:35,147 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-21_00-37-35.log] [testng] 00:37:35,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@403fe368 - End of configuration. [testng] [2025-03-21 00:38:05,795] [pool-1-thread-4] Initializing /data/samples/Deconvolution/Silver birch raw.vsi: [testng] [2025-03-21 00:38:08,590] [pool-1-thread-6] Initializing /data/samples/Image SHOW/HER2_FISH Assay.tif: [testng] [2025-03-21 00:38:23,191] [pool-1-thread-2] Initializing /data/samples/Process/HER2_FISH Assay.tif: [testng] [2025-03-21 00:38:30,443] [pool-1-thread-10] Initializing /data/samples/Measurement & ROI/Brown snake.tif: [testng] [2025-03-21 00:38:38,054] [pool-1-thread-8] Initializing /data/anthony/11R1398A1.vsi: [testng] [2025-03-21 00:38:41,536] [pool-1-thread-3] Initializing /data/alex/pN1_new.vsi: [testng] [2025-03-21 00:38:56,287] [pool-1-thread-4] Initializing /data/qa-29751/VSI-import-example-file.vsi: [testng] [2025-03-21 00:39:09,403] [pool-1-thread-6] Initializing /data/samples/Fluorescence Unmixing/HeLa_original.tif: [testng] [2025-03-21 00:39:31,770] [pool-1-thread-10] Initializing /data/brian/BZ cfos1-2_05.vsi: [testng] [2025-03-21 00:39:35,768] [pool-1-thread-2] Initializing /data/melissa/artificial-vsi/Image_V4.1_BF.vsi: [testng] [2025-03-21 00:40:06,416] [pool-1-thread-6] Initializing /data/brian/SW10082402-02_21.vsi: [testng] [2025-03-21 00:45:53,209] [pool-1-thread-12] Initializing /data/samples/Channels/svens cells - green.tif: [testng] [2025-03-21 00:46:02,974] [pool-1-thread-3] Initializing /data/samples/Count & Measure/slide IHC.tif: [testng] [2025-03-21 00:46:40,625] [pool-1-thread-12] Initializing /data/melissa/SW10082402-02_21 - 1 - GOLD copy.vsi: [testng] [2025-03-21 00:46:46,912] [pool-1-thread-3] Initializing /data/samples/Channels/svens cells - blue.tif: [testng] [2025-03-21 00:46:57,605] [pool-1-thread-10] Initializing /data/samples/Fluorescence/Plant FL 100x 29 Z CI Decon2.vsi: [testng] [2025-03-21 00:47:24,034] [pool-1-thread-10] Initializing /data/samples/Process/Epithelial Cells3.tif: [testng] [2025-03-21 00:47:31,218] [pool-1-thread-3] Initializing /data/olivier/Stress47_02.vsi: [testng] [2025-03-21 00:47:35,035] [pool-1-thread-11] Initializing /data/olivier/7262 wt col.vsi: [testng] [2025-03-21 00:47:41,197] [pool-1-thread-4] Initializing /data/robert/Lung_Mite.vsi: [testng] [2025-03-21 00:48:02,181] [pool-1-thread-4] Initializing /data/samples/Channels/svens cells - DIC.tif: [testng] [2025-03-21 00:48:14,371] [pool-1-thread-10] Initializing /data/public/evident/Image_V4.1_BF.vsi: [testng] [2025-03-21 00:48:44,542] [pool-1-thread-4] Initializing /data/gh-3822/image.vsi: [testng] [2025-03-21 00:48:48,592] [pool-1-thread-5] Initializing /data/samples/Colocalisation/Daisy_Coloc.vsi: [testng] [2025-03-21 00:48:55,111] [pool-1-thread-6] Initializing /data/samples/Measurement & ROI/Snake.tif: [testng] [2025-03-21 00:49:11,616] [pool-1-thread-5] Initializing /data/samples/Fluorescence/drehung.avi: [testng] [2025-03-21 00:49:22,569] [pool-1-thread-5] Initializing /data/samples/Fluorescence/Dako_CISH.vsi: [testng] [2025-03-21 00:49:32,297] [pool-1-thread-6] Initializing /data/gh-3819/H30-18-endo-sost-40x.vsi: [testng] [2025-03-21 00:49:43,522] [pool-1-thread-5] Initializing /data/johannes/PSF_green_1.vsi: [testng] [2025-03-21 00:50:16,719] [pool-1-thread-5] Initializing /data/samples/Measurement & ROI/Cell Multichannel-M&R.tif: [testng] [2025-03-21 00:50:37,654] [pool-1-thread-9] Initializing /data/qa-11394/f1 lateral 25hpf yen4 20X timelapse.vsi: [testng] [2025-03-21 00:50:48,588] [pool-1-thread-4] Initializing /data/michelle/FC(26)-19 Gadd45b 1hr_20121011_01.vsi: [testng] [2025-03-21 00:50:58,881] [pool-1-thread-5] Initializing /data/olivier/26-10-2014/Image_27.vsi: [testng] [2025-03-21 00:51:04,730] [pool-1-thread-6] Initializing /data/olivier/14-09-2012/Image_07.vsi: [testng] [2025-03-21 00:51:06,656] [pool-1-thread-12] Initializing /data/gh-3822/image.jp2: [testng] [2025-03-21 00:51:12,649] [pool-1-thread-9] Initializing /data/samples/Measurement & ROI/Intensity t series.vsi: [testng] [2025-03-21 00:51:34,858] [pool-1-thread-9] Initializing /data/brian/Image_28.vsi: [testng] [2025-03-21 00:51:48,519] [pool-1-thread-12] Initializing /data/olivier/26-10-2014/Image_06.vsi: [testng] [2025-03-21 00:51:52,523] [pool-1-thread-1] Initializing /data/public/evident/Image_V4.1_FL_2D.vsi: [testng] [2025-03-21 00:53:03,446] [pool-1-thread-11] Initializing /data/samples/Shading Correction/Micrometer Background.tif: [testng] [2025-03-21 00:53:08,833] [pool-1-thread-7] Initializing /data/public/evident/Image_V4.1_FL_3D.vsi: [testng] [2025-03-21 00:53:43,292] [pool-1-thread-11] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack.vsi: [testng] [2025-03-21 00:53:58,388] [pool-1-thread-11] Initializing /data/melissa/SW10082402-02_21 - cy2 - cy5 copy.vsi: [testng] [2025-03-21 00:54:23,768] [pool-1-thread-3] Initializing /data/david/smithd_20111115_1.vsi: [testng] [2025-03-21 00:54:32,703] [pool-1-thread-2] Initializing /data/samples/Fluorescence Unmixing/HeLa_YFP_only.tif: [testng] [2025-03-21 00:55:08,837] [pool-1-thread-2] Initializing /data/olivier/small-tiles/esgTS-+;Sox21a[6]-+_30D25_09.vsi: [testng] [2025-03-21 00:58:41,032] [pool-1-thread-11] Initializing /data/samples/Measurement & ROI/Bandy Snake.tif: [testng] [2025-03-21 00:59:12,542] [pool-1-thread-11] Initializing /data/samples/Count & Measure/Cell Multichannel-z-stack corr..vsi: [testng] [2025-03-21 00:59:17,899] [pool-1-thread-10] Initializing /data/anda/Image_01_V76 K2 11_lung.thumbnail.jpg: [testng] [2025-03-21 00:59:27,691] [pool-1-thread-11] Initializing /data/qa-18870/Image_T30.vsi: [testng] [2025-03-21 00:59:32,330] [pool-1-thread-10] Initializing /data/alex/test.vsi: [testng] [2025-03-21 00:59:58,307] [pool-1-thread-10] Initializing /data/samples/Fluorescence Unmixing/HeLa_unmixed.tif: [testng] [2025-03-21 01:00:13,471] [pool-1-thread-9] Initializing /data/anda/Image_01_V76 K2 11_lung.overview.jpg: [testng] [2025-03-21 01:00:39,652] [pool-1-thread-10] Initializing /data/samples/Count & Measure/color dots.tif: [testng] [2025-03-21 01:00:50,931] [pool-1-thread-9] Initializing /data/samples/Image SHOW/Layer&Channels.tif: [testng] [2025-03-21 01:01:24,638] [pool-1-thread-12] Initializing /data/samples/Count & Measure/color squares.tif: [testng] [2025-03-21 01:01:33,180] [pool-1-thread-9] Initializing /data/samples/Deconvolution/Gut section raw.vsi: [testng] [2025-03-21 01:01:35,573] [pool-1-thread-10] Initializing /data/olivier/Image_06.vsi: [testng] [2025-03-21 01:01:38,496] [pool-1-thread-5] Initializing /data/samples/Channels/Composite.vsi: [testng] [2025-03-21 01:01:44,368] [pool-1-thread-6] Initializing /data/samples/Deconvolution/Skin 2.tif: [testng] 02:36:40,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:36:40,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:40,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-21_02-36-40.log] [testng] 02:36:40,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@517fbf62 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 3816, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 131 minutes 16 seconds Finished: SUCCESS