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Started by upstream project "BIOFORMATS-test-repo" build number 387 originally caused by: Started by upstream project "Trigger" build number 410 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins14879248070201832244.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_61159_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:25:45,818 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:25:45,820 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 00:25:45,820 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:25:45,821 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:25:45,821 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:25:45,822 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:25:45,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:25:45,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:25:45,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:25:45,823 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:25:45,823 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:25:45,824 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:25:46,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:25:46,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:25:46,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:25:46,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:25:46,031 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:25:46,032 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:25:46,032 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:25:46,032 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:25:46,032 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 00:25:46,033 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 00:25:46,033 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 211 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-22 00:25:46,042] [main] java.version = 11.0.16 [testng] 00:25:46,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:25:46,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:25:46,089 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-22_00-25-46.log] [testng] 00:25:46,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-22 00:25:46,092] [main] testng.directory = /data [testng] [2025-03-22 00:25:46,093] [main] testng.configDirectory = /config [testng] [2025-03-22 00:25:46,113] [main] testng.multiplier = 1.0 [testng] [2025-03-22 00:25:46,114] [main] testng.in-memory = false [testng] [2025-03-22 00:25:46,114] [main] testng.allow-missing = false [testng] [2025-03-22 00:25:46,114] [main] user.language = en [testng] [2025-03-22 00:25:46,115] [main] user.country = ${user.country} [testng] [2025-03-22 00:25:46,115] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-22 00:25:50,215] [main] ---------------------------------------- [testng] [2025-03-22 00:25:50,215] [main] Total files: 103 [testng] [2025-03-22 00:25:50,215] [main] Scan time: 4.1 s (39 ms/file) [testng] [2025-03-22 00:25:50,215] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-22 00:26:16,756] [pool-1-thread-1] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 00:26:16,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:26:16,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:16,759 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-22_00-26-16.log] [testng] 00:26:16,760 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f5fa9a0 - End of configuration. [testng] [2025-03-22 00:26:16,916] [pool-1-thread-12] Initializing /data/ofra/lowloss.dm3: [testng] 00:26:16,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:26:16,917 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:16,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-22_00-26-16.log] [testng] 00:26:16,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d2a71b0 - End of configuration. [testng] [2025-03-22 00:26:17,057] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] 00:26:17,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:26:17,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:17,059 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-22_00-26-17.log] [testng] 00:26:17,059 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65a71622 - End of configuration. [testng] [2025-03-22 00:26:17,223] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] 00:26:17,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:26:17,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:17,224 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-22_00-26-17.log] [testng] 00:26:17,225 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fa329f9 - End of configuration. [testng] [2025-03-22 00:26:17,384] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] 00:26:17,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:26:17,384 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:17,385 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-22_00-26-17.log] [testng] 00:26:17,385 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55318f3d - End of configuration. [testng] [2025-03-22 00:26:17,555] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] 00:26:17,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:26:17,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:17,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-22_00-26-17.log] [testng] 00:26:17,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12eb1d9a - End of configuration. [testng] [2025-03-22 00:26:18,763] [pool-1-thread-7] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] 00:26:18,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:26:18,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:18,764 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-22_00-26-18.log] [testng] 00:26:18,764 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f0b629e - End of configuration. [testng] [2025-03-22 00:26:19,752] [pool-1-thread-6] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] 00:26:19,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:26:19,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:19,753 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-22_00-26-19.log] [testng] 00:26:19,754 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b25825 - End of configuration. [testng] [2025-03-22 00:26:19,914] [pool-1-thread-5] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] 00:26:19,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:26:19,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:19,915 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-22_00-26-19.log] [testng] 00:26:19,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67fbeca0 - End of configuration. [testng] [2025-03-22 00:26:20,084] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 00:26:20,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:26:20,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:20,085 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-22_00-26-20.log] [testng] 00:26:20,085 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e9ab45e - End of configuration. [testng] [2025-03-22 00:26:20,264] [pool-1-thread-3] Initializing /data/jay/dnasample1.dm3: [testng] 00:26:20,264 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:26:20,264 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:20,265 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-22_00-26-20.log] [testng] 00:26:20,265 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f690185 - End of configuration. [testng] [2025-03-22 00:26:20,601] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] 00:26:20,601 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:26:20,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:20,602 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-22_00-26-20.log] [testng] 00:26:20,603 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b531779 - End of configuration. [testng] [2025-03-22 00:26:24,692] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-03-22 00:26:26,006] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2025-03-22 00:26:26,218] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2025-03-22 00:26:26,454] [pool-1-thread-9] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2025-03-22 00:26:27,085] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2025-03-22 00:26:30,564] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3: [testng] [2025-03-22 00:26:30,917] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2025-03-22 00:26:31,307] [pool-1-thread-3] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2025-03-22 00:26:31,890] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2025-03-22 00:26:35,570] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2025-03-22 00:26:37,036] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2025-03-22 00:26:38,636] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2025-03-22 00:26:40,885] [pool-1-thread-12] Initializing /data/jay/recAmaghi.dm3: [testng] [2025-03-22 00:26:41,497] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2025-03-22 00:26:41,840] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2025-03-22 00:26:42,466] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2025-03-22 00:26:44,161] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-03-22 00:26:45,219] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2025-03-22 00:26:46,130] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2025-03-22 00:26:47,017] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2025-03-22 00:26:47,911] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2025-03-22 00:26:48,049] [pool-1-thread-9] Initializing /data/qa-7642/8.dm4: [testng] [2025-03-22 00:26:48,954] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2025-03-22 00:26:49,134] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3: [testng] [2025-03-22 00:26:50,098] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2025-03-22 00:26:50,782] [pool-1-thread-2] Initializing /data/jay/dnasample.tif: [testng] [2025-03-22 00:26:52,381] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2025-03-22 00:26:53,535] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2025-03-22 00:26:54,324] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2025-03-22 00:26:54,806] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2025-03-22 00:26:56,005] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2025-03-22 00:26:56,251] [pool-1-thread-1] Initializing /data/jay/ViewDMtest.dm3: [testng] [2025-03-22 00:26:56,944] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2025-03-22 00:26:57,174] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2025-03-22 00:26:58,052] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2025-03-22 00:26:58,269] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2025-03-22 00:26:59,547] [pool-1-thread-9] Initializing /data/jay/smallerfile.dm3: [testng] [2025-03-22 00:27:00,514] [pool-1-thread-10] Initializing /data/melissa/annotation-test.tif: [testng] [2025-03-22 00:27:01,635] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2025-03-22 00:27:05,028] [pool-1-thread-11] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2025-03-22 00:27:05,606] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2025-03-22 00:27:07,827] [pool-1-thread-9] Initializing /data/samples/test-tiles.dm3: [testng] [2025-03-22 00:27:08,697] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2025-03-22 00:27:09,458] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2025-03-22 00:27:10,808] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2025-03-22 00:27:11,005] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2025-03-22 00:27:11,521] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2025-03-22 00:27:13,110] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2025-03-22 00:27:14,941] [pool-1-thread-1] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2025-03-22 00:27:18,206] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2025-03-22 00:27:18,783] [pool-1-thread-8] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2025-03-22 00:27:19,381] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2025-03-22 00:27:23,662] [pool-1-thread-11] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2025-03-22 00:27:24,357] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2025-03-22 00:27:25,131] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2025-03-22 00:27:25,912] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2025-03-22 00:27:26,513] [pool-1-thread-7] Initializing /data/melissa/annotation-test.dm3: [testng] [2025-03-22 00:27:27,237] [pool-1-thread-4] Initializing /data/chip/Nanogold-1.dm3: [testng] [2025-03-22 00:27:30,742] [pool-1-thread-2] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2025-03-22 00:27:31,619] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2025-03-22 00:27:32,207] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2025-03-22 00:27:33,681] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2025-03-22 00:27:35,096] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] [2025-03-22 00:27:35,763] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2025-03-22 00:27:36,379] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2025-03-22 00:27:36,875] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-03-22 00:27:40,956] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2025-03-22 00:27:42,483] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2025-03-22 00:27:43,686] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2025-03-22 00:27:46,852] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2025-03-22 00:27:47,311] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2025-03-22 00:27:48,394] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2025-03-22 00:27:49,373] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2025-03-22 00:27:50,148] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3: [testng] [2025-03-22 00:27:50,581] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2025-03-22 00:27:51,079] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2025-03-22 00:27:53,922] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2025-03-22 00:27:54,906] [pool-1-thread-4] Initializing /data/jay/DMtest2.dm3: [testng] [2025-03-22 00:27:56,841] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2025-03-22 00:27:57,296] [pool-1-thread-12] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2025-03-22 00:27:59,956] [pool-1-thread-3] Initializing /data/jay/graphitedm3.dm3: [testng] [2025-03-22 00:28:00,371] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2025-03-22 00:28:00,790] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2025-03-22 00:28:03,547] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2025-03-22 00:28:04,943] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2025-03-22 00:28:05,413] [pool-1-thread-11] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 39 seconds Finished: SUCCESS