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Started by upstream project "BIOFORMATS-test-repo" build number 389 originally caused by: Started by upstream project "Trigger" build number 412 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins1190761690716814957.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_61529_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:35:46,495 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:35:46,497 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 00:35:46,497 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:35:46,499 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:35:46,499 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:35:46,499 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:35:46,499 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:35:46,499 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:35:46,500 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:35:46,500 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:35:46,500 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:35:46,500 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:35:46,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:35:46,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:35:46,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:35:46,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:35:46,780 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:35:46,780 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:35:46,780 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:35:46,781 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:35:46,781 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 00:35:46,782 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 00:35:46,782 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 282 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-24 00:35:46,792] [main] java.version = 1.8.0_342 [testng] 00:35:46,795 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:35:46,795 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:35:46,840 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-24_00-35-46.log] [testng] 00:35:46,842 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-24 00:35:46,844] [main] testng.directory = /data [testng] [2025-03-24 00:35:46,844] [main] testng.configDirectory = /config [testng] [2025-03-24 00:35:46,856] [main] testng.multiplier = 1.0 [testng] [2025-03-24 00:35:46,857] [main] testng.in-memory = false [testng] [2025-03-24 00:35:46,857] [main] testng.allow-missing = false [testng] [2025-03-24 00:35:46,857] [main] user.language = fr [testng] [2025-03-24 00:35:46,857] [main] user.country = FR [testng] [2025-03-24 00:35:46,857] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-24 00:37:42,309] [main] ---------------------------------------- [testng] [2025-03-24 00:37:42,309] [main] Total files: 259 [testng] [2025-03-24 00:37:42,309] [main] Scan time: 115.452 s (445 ms/file) [testng] [2025-03-24 00:37:42,309] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-24 01:02:06,826] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 01:02:06,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:02:06,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:06,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-24_01-02-06.log] [testng] 01:02:06,828 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bfcb2a0 - End of configuration. [testng] [2025-03-24 01:02:15,540] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 01:02:15,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:02:15,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:15,541 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-24_01-02-15.log] [testng] 01:02:15,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1655a980 - End of configuration. [testng] [2025-03-24 01:02:17,438] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 01:02:17,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:02:17,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:17,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-24_01-02-17.log] [testng] 01:02:17,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f632872 - End of configuration. [testng] [2025-03-24 01:02:39,098] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 01:02:39,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:02:39,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:39,099 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-24_01-02-39.log] [testng] 01:02:39,100 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f81a150 - End of configuration. [testng] [2025-03-24 01:02:41,544] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 01:02:41,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:02:41,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:41,545 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-24_01-02-41.log] [testng] 01:02:41,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42cbdff9 - End of configuration. [testng] [2025-03-24 01:02:43,291] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 01:02:43,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:02:43,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:43,292 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-24_01-02-43.log] [testng] 01:02:43,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13291de9 - End of configuration. [testng] [2025-03-24 01:02:45,449] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 01:02:45,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:02:45,450 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:02:45,450 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-24_01-02-45.log] [testng] 01:02:45,451 |-INFO in ch.qos.logback.core.sift.SiftProcessor@743a6d38 - End of configuration. [testng] [2025-03-24 01:03:26,249] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 01:03:26,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:03:26,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:03:26,250 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-24_01-03-26.log] [testng] 01:03:26,250 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ec5e786 - End of configuration. [testng] [2025-03-24 01:03:28,207] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 01:03:28,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:03:28,207 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:03:28,208 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-24_01-03-28.log] [testng] 01:03:28,208 |-INFO in ch.qos.logback.core.sift.SiftProcessor@686cad44 - End of configuration. [testng] [2025-03-24 01:03:31,534] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 01:03:31,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:03:31,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:03:31,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-24_01-03-31.log] [testng] 01:03:31,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a8c04f9 - End of configuration. [testng] [2025-03-24 01:04:13,701] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 01:04:13,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:04:13,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:04:13,702 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-24_01-04-13.log] [testng] 01:04:13,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4605fc2e - End of configuration. [testng] [2025-03-24 01:04:16,431] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 01:04:16,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:04:16,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:04:16,432 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-24_01-04-16.log] [testng] 01:04:16,433 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a75fb03 - End of configuration. [testng] [2025-03-24 01:04:33,733] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2025-03-24 01:04:34,299] [pool-1-thread-6] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2025-03-24 01:04:37,875] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2025-03-24 01:04:47,491] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oif: [testng] [2025-03-24 01:05:09,490] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2025-03-24 01:05:11,757] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2025-03-24 01:05:17,837] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2025-03-24 01:05:21,230] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2025-03-24 01:05:35,184] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2025-03-24 01:05:44,949] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2025-03-24 01:05:51,178] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2025-03-24 01:10:47,387] [pool-1-thread-8] Initializing /data/glen/simulstack.oib: [testng] [2025-03-24 01:10:52,129] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2025-03-24 01:12:00,244] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2025-03-24 01:12:02,997] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2025-03-24 01:12:20,614] [pool-1-thread-8] Initializing /data/glen/singleseqline.oib: [testng] [2025-03-24 01:12:27,114] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2025-03-24 01:12:30,088] [pool-1-thread-5] Initializing /data/monica/Image0056.oif: [testng] [2025-03-24 01:12:34,283] [pool-1-thread-3] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2025-03-24 01:12:48,454] [pool-1-thread-8] Initializing /data/francesco/fGfp.c15.oib: [testng] [2025-03-24 01:12:56,560] [pool-1-thread-6] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2025-03-24 01:13:05,045] [pool-1-thread-3] Initializing /data/brian/PA-GFP-3.oib: [testng] [2025-03-24 01:13:20,217] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2025-03-24 01:13:31,206] [pool-1-thread-3] Initializing /data/glen/111407.oif: [testng] [2025-03-24 01:13:56,132] [pool-1-thread-8] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2025-03-24 01:14:17,774] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oif: [testng] [2025-03-24 01:16:19,356] [pool-1-thread-5] Initializing /data/glen/notsaturated.oif: [testng] [2025-03-24 01:18:08,551] [pool-1-thread-6] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2025-03-24 01:18:25,820] [pool-1-thread-6] Initializing /data/brian/CFP-GFP2.oib: [testng] [2025-03-24 01:18:45,795] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2025-03-24 01:19:03,409] [pool-1-thread-6] Initializing /data/glen/Image0002.oif: [testng] [2025-03-24 01:42:16,918] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib: [testng] [2025-03-24 01:42:34,081] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2025-03-24 01:42:52,057] [pool-1-thread-2] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2025-03-24 01:48:17,409] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2025-03-24 01:48:33,710] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2025-03-24 01:49:02,005] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2025-03-24 01:50:07,824] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2025-03-24 01:50:16,230] [pool-1-thread-5] Initializing /data/tom/zseries-test.oib: [testng] [2025-03-24 01:50:40,500] [pool-1-thread-5] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2025-03-24 01:51:01,721] [pool-1-thread-5] Initializing /data/yasunori/series_1.oib: [testng] [2025-03-24 01:51:20,816] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2025-03-24 01:51:45,021] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2025-03-24 01:52:08,219] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2025-03-24 01:52:16,951] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2025-03-24 01:52:39,920] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2025-03-24 01:52:46,456] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2025-03-24 01:53:06,343] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2025-03-24 01:59:22,794] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2025-03-24 01:59:50,823] [pool-1-thread-2] Initializing /data/david/Image0016.oif: [testng] [2025-03-24 02:05:44,399] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] [2025-03-24 02:08:16,595] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2025-03-24 02:08:25,494] [pool-1-thread-2] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2025-03-24 02:09:08,208] [pool-1-thread-2] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2025-03-24 02:11:51,425] [pool-1-thread-2] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2025-03-24 02:12:19,560] [pool-1-thread-2] Initializing /data/brian/lambda02nm.oib: [testng] [2025-03-24 02:12:39,339] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2025-03-24 02:13:05,037] [pool-1-thread-2] Initializing /data/karl/Image0009.oib: [testng] [2025-03-24 02:13:28,001] [pool-1-thread-2] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2025-03-24 02:13:53,534] [pool-1-thread-2] Initializing /data/glen/4205basal106072.oif: [testng] 02:14:11,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:14:11,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:11,386 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-24_02-14-11.log] [testng] 02:14:11,387 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79824aec - End of configuration. [testng] [2025-03-24 02:16:47,141] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2025-03-24 02:17:06,452] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2025-03-24 02:17:29,132] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib: [testng] [2025-03-24 02:17:52,144] [pool-1-thread-3] Initializing /data/molly/11OCT9.OIF: [testng] 02:18:00,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:18:00,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:00,052 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-24_02-18-00.log] [testng] 02:18:00,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@477dc55f - End of configuration. [testng] [2025-03-24 02:20:07,111] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2025-03-24 02:20:26,535] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2025-03-24 02:20:45,774] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2025-03-24 02:21:08,696] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2025-03-24 02:21:30,870] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: [testng] [2025-03-24 02:21:49,280] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2025-03-24 02:22:05,136] [pool-1-thread-1] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2025-03-24 02:22:24,027] [pool-1-thread-1] Initializing /data/simon/never_worked.oib: [testng] [2025-03-24 02:22:43,037] [pool-1-thread-1] Initializing /data/johannes/step1.bmp: [testng] [2025-03-24 02:22:50,573] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2025-03-24 02:23:14,080] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib: [testng] [2025-03-24 02:23:37,912] [pool-1-thread-1] Initializing /data/stefan/cytosol_03e.oib: [testng] [2025-03-24 02:23:59,994] [pool-1-thread-1] Initializing /data/molly/11OCT8.OIF: [testng] [2025-03-24 02:28:28,696] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2025-03-24 02:28:43,815] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2025-03-24 02:28:59,174] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2025-03-24 02:29:12,358] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] [2025-03-24 02:29:15,731] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif: [testng] [2025-03-24 02:29:32,812] [pool-1-thread-4] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2025-03-24 02:29:53,121] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2025-03-24 02:30:09,302] [pool-1-thread-4] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2025-03-24 02:30:22,920] [pool-1-thread-4] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2025-03-24 02:30:38,176] [pool-1-thread-4] Initializing /data/yoshihito/XY.oif: [testng] [2025-03-24 02:31:16,337] [pool-1-thread-6] Initializing /data/stefan/cytosol_01a.oif: [testng] 02:35:53,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:35:53,999 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:35:54,001 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-24_02-35-54.log] [testng] 02:35:54,001 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19c3282c - End of configuration. [testng] [2025-03-24 02:37:04,763] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2025-03-24 02:37:25,736] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2025-03-24 02:37:36,456] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2025-03-24 02:37:46,622] [pool-1-thread-7] Initializing /data/molly/11OCT7.OIF: [testng] [2025-03-24 02:38:55,382] [pool-1-thread-4] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2025-03-24 02:39:11,800] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2025-03-24 02:40:02,977] [pool-1-thread-8] Initializing /data/allan/62909#1.oib: [testng] [2025-03-24 02:40:22,565] [pool-1-thread-8] Initializing /data/molly/11OCT11.OIF: [testng] [2025-03-24 02:46:58,245] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2025-03-24 02:50:26,813] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2025-03-24 02:50:47,608] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2025-03-24 03:02:04,097] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2025-03-24 03:02:27,817] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2025-03-24 03:04:07,395] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2025-03-24 03:04:27,020] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2025-03-24 03:05:05,193] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2025-03-24 03:09:07,361] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2025-03-24 03:26:03,542] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2025-03-24 03:26:26,351] [pool-1-thread-4] Initializing /data/qa-17748/Image0098.oib: [testng] [2025-03-24 03:26:47,929] [pool-1-thread-4] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2025-03-24 03:27:11,409] [pool-1-thread-4] Initializing /data/tom/RGB-1.avi: [testng] [2025-03-24 03:27:24,873] [pool-1-thread-4] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] 03:27:31,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:27:31,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:27:31,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-24_03-27-31.log] [testng] 03:27:31,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37f88cda - End of configuration. [testng] [2025-03-24 03:27:49,927] [pool-1-thread-4] Initializing /data/brian/Kaede15.oib: [testng] [2025-03-24 03:28:12,458] [pool-1-thread-4] Initializing /data/stefan/cytosol_08b.oif: [testng] 03:49:45,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:49:45,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:49:45,211 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-24_03-49-45.log] [testng] 03:49:45,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2dacd6fb - End of configuration. [testng] [2025-03-24 03:50:26,149] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: [testng] [2025-03-24 03:53:09,705] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2025-03-24 03:53:31,733] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2025-03-24 03:53:49,783] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2025-03-24 03:54:10,853] [pool-1-thread-1] Initializing /data/johannes/step4.bmp: [testng] [2025-03-24 03:54:18,740] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] [2025-03-24 03:54:27,330] [pool-1-thread-1] Initializing /data/simon/used_to_work.oib: [testng] [2025-03-24 03:54:51,255] [pool-1-thread-1] Initializing /data/johannes/step3.bmp: [testng] [2025-03-24 03:54:59,862] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2025-03-24 03:55:20,395] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2025-03-24 03:55:51,400] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2025-03-24 03:56:17,017] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2025-03-24 03:56:38,498] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2025-03-24 04:00:34,711] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2025-03-24 04:00:44,802] [pool-1-thread-7] Initializing /data/jae/Image0001.oib: [testng] [2025-03-24 04:01:00,739] [pool-1-thread-2] Initializing /data/glen/singlesimul.oif: [testng] [2025-03-24 04:01:12,525] [pool-1-thread-7] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2025-03-24 04:04:54,599] [pool-1-thread-2] Initializing /data/marc/V0606L.oib: [testng] [2025-03-24 04:05:29,607] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2025-03-24 04:05:53,025] [pool-1-thread-2] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 04:11:06,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:11:06,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:11:06,066 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-24_04-11-06.log] [testng] 04:11:06,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42422dd4 - End of configuration. [testng] 04:25:52,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:25:52,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:25:52,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-24_04-25-52.log] [testng] 04:25:52,490 |-INFO in ch.qos.logback.core.sift.SiftProcessor@721f6060 - End of configuration. [testng] 04:36:53,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:36:53,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:36:53,824 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-24_04-36-53.log] [testng] 04:36:53,825 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bc13a26 - End of configuration. [testng] 04:38:25,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:38:25,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:38:25,011 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-24_04-38-25.log] [testng] 04:38:25,011 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f33986b - End of configuration. [testng] 06:30:54,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 06:30:54,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:30:54,377 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-24_06-30-54.log] [testng] 06:30:54,377 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c11d32e - End of configuration. [testng] 08:18:16,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:18:16,921 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:18:16,922 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-24_08-18-16.log] [testng] 08:18:16,922 |-INFO in ch.qos.logback.core.sift.SiftProcessor@130b2213 - End of configuration. [testng] 08:36:26,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:36:26,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:36:26,584 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-24_08-36-26.log] [testng] 08:36:26,584 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48ac1d1a - End of configuration. [testng] 09:03:00,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 09:03:00,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:03:00,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-24_09-03-00.log] [testng] 09:03:00,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@464de784 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 507 minutes 16 seconds Finished: SUCCESS