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Started by upstream project "BIOFORMATS-test-repo" build number 389 originally caused by: Started by upstream project "Trigger" build number 412 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@18 [BIOFORMATS-test-folder@18] $ /bin/bash -xe /tmp/jenkins9637594085272929566.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_61616_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:19:39,826 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 03:19:39,828 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 03:19:39,828 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:19:39,829 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:19:39,829 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:19:39,829 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:19:39,829 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:19:39,829 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:19:39,830 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:19:39,830 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:19:39,831 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:19:39,831 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:19:40,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:19:40,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:19:40,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:19:40,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:19:40,096 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:19:40,096 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:19:40,096 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:19:40,096 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:19:40,096 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 03:19:40,097 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 03:19:40,097 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 267 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-24 03:19:40,108] [main] java.version = 1.8.0_342 [testng] 03:19:40,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:19:40,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:19:40,157 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-24_03-19-40.log] [testng] 03:19:40,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-24 03:19:40,160] [main] testng.directory = /data [testng] [2025-03-24 03:19:40,160] [main] testng.configDirectory = /config [testng] [2025-03-24 03:19:40,173] [main] testng.multiplier = 1.0 [testng] [2025-03-24 03:19:40,173] [main] testng.in-memory = false [testng] [2025-03-24 03:19:40,173] [main] testng.allow-missing = false [testng] [2025-03-24 03:19:40,173] [main] user.language = fr [testng] [2025-03-24 03:19:40,173] [main] user.country = FR [testng] [2025-03-24 03:19:40,173] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-24 03:31:48,361] [main] ---------------------------------------- [testng] [2025-03-24 03:31:48,362] [main] Total files: 15735 [testng] [2025-03-24 03:31:48,362] [main] Scan time: 728.188 s (46 ms/file) [testng] [2025-03-24 03:31:48,362] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-24 03:47:34,566] [pool-1-thread-1] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:47:34,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:47:34,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:34,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-24_03-47-34.log] [testng] 03:47:34,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73250482 - End of configuration. [testng] [2025-03-24 03:47:42,270] [pool-1-thread-12] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] 03:47:42,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:47:42,271 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:42,271 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-24_03-47-42.log] [testng] 03:47:42,272 |-INFO in ch.qos.logback.core.sift.SiftProcessor@736c2da5 - End of configuration. [testng] [2025-03-24 03:47:49,606] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 03:47:49,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:47:49,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:49,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-24_03-47-49.log] [testng] 03:47:49,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12274030 - End of configuration. [testng] [2025-03-24 03:47:57,053] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] 03:47:57,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:47:57,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:47:57,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-24_03-47-57.log] [testng] 03:47:57,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e9013ff - End of configuration. [testng] [2025-03-24 03:48:04,534] [pool-1-thread-9] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] 03:48:04,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:48:04,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:04,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-24_03-48-04.log] [testng] 03:48:04,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59a979e0 - End of configuration. [testng] [2025-03-24 03:48:12,003] [pool-1-thread-8] Initializing /data/converted/converted/2chz.tif: [testng] 03:48:12,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:48:12,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:12,004 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-24_03-48-12.log] [testng] 03:48:12,005 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32f4b830 - End of configuration. [testng] [2025-03-24 03:48:17,405] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 03:48:17,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:48:17,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:17,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-24_03-48-17.log] [testng] 03:48:17,406 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18a96741 - End of configuration. [testng] [2025-03-24 03:48:23,779] [pool-1-thread-6] Initializing /data/converted/dietmar/138.tif: [testng] 03:48:23,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:48:23,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:23,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-24_03-48-23.log] [testng] 03:48:23,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cffb8f7 - End of configuration. [testng] [2025-03-24 03:48:30,697] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 03:48:30,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:48:30,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:30,698 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-24_03-48-30.log] [testng] 03:48:30,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@124dc6f8 - End of configuration. [testng] [2025-03-24 03:48:38,567] [pool-1-thread-4] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 03:48:38,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:48:38,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:38,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-24_03-48-38.log] [testng] 03:48:38,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a9f94bc - End of configuration. [testng] [2025-03-24 03:48:45,257] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] 03:48:45,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:48:45,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:45,258 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-24_03-48-45.log] [testng] 03:48:45,258 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ae1a175 - End of configuration. [testng] [2025-03-24 03:48:52,014] [pool-1-thread-2] Initializing /data/converted/converted/damian.tif: [testng] 03:48:52,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:48:52,014 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:48:52,015 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-24_03-48-52.log] [testng] 03:48:52,015 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49b42c7e - End of configuration. [testng] [2025-03-24 03:50:33,927] [pool-1-thread-1] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2025-03-24 03:50:41,714] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2025-03-24 03:50:50,336] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2025-03-24 03:50:58,096] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2025-03-24 03:52:40,802] [pool-1-thread-1] Initializing /data/converted/karsten/Bild1.tif: [testng] [2025-03-24 03:52:47,955] [pool-1-thread-10] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2025-03-24 03:54:35,583] [pool-1-thread-12] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2025-03-24 03:54:44,923] [pool-1-thread-10] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2025-03-24 03:55:31,045] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2025-03-24 04:02:08,799] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2025-03-24 04:04:11,847] [pool-1-thread-11] Initializing /data/scott/Slide133-11.tif: [testng] [2025-03-24 04:04:27,537] [pool-1-thread-4] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2025-03-24 04:04:34,596] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2025-03-24 04:06:01,148] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2025-03-24 04:06:36,467] [pool-1-thread-4] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2025-03-24 04:07:42,087] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2025-03-24 04:07:55,636] [pool-1-thread-8] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2025-03-24 04:08:45,933] [pool-1-thread-3] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2025-03-24 04:09:12,566] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2025-03-24 04:14:35,686] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2025-03-24 04:16:15,261] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2025-03-24 04:16:46,023] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2025-03-24 04:17:47,576] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2025-03-24 04:18:24,324] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2025-03-24 04:18:44,346] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2025-03-24 04:21:47,377] [pool-1-thread-2] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2025-03-24 04:27:17,507] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] [2025-03-24 04:31:32,452] [pool-1-thread-9] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2025-03-24 04:36:08,250] [pool-1-thread-1] Initializing /data/converted/othmar/z-stack.tif: [testng] [2025-03-24 04:37:12,854] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2025-03-24 04:41:56,692] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2025-03-24 04:43:31,602] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2025-03-24 04:43:57,322] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2025-03-24 04:45:22,479] [pool-1-thread-4] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2025-03-24 04:47:27,073] [pool-1-thread-7] Initializing /data/converted/dan/adultnr1.tif: [testng] [2025-03-24 04:50:15,371] [pool-1-thread-11] Initializing /data/scott/Slide133-01.tif: [testng] [2025-03-24 04:51:13,767] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2025-03-24 04:51:43,889] [pool-1-thread-11] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2025-03-24 04:51:50,453] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2025-03-24 04:53:23,573] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] 05:03:47,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 05:03:47,983 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:03:47,984 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-24_05-03-47.log] [testng] 05:03:47,985 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d5331b7 - End of configuration. [testng] [2025-03-24 05:08:39,802] [pool-1-thread-11] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2025-03-24 05:10:51,770] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2025-03-24 05:17:06,476] [pool-1-thread-5] Initializing /data/converted/vladan/vladan.tif: [testng] [2025-03-24 05:19:17,029] [pool-1-thread-7] Initializing /data/converted/karsten/Bild2.tif: [testng] [2025-03-24 05:21:26,133] [pool-1-thread-2] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2025-03-24 05:22:00,180] [pool-1-thread-7] Initializing /data/converted/dietmar/137.tif: [testng] [2025-03-24 05:23:27,050] [pool-1-thread-2] Initializing /data/converted/converted/2chzt.tif: [testng] [2025-03-24 05:23:37,709] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2025-03-24 05:32:41,959] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] 05:34:22,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 05:34:22,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:34:22,070 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-24_05-34-22.log] [testng] 05:34:22,070 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b345d3f - End of configuration. [testng] [2025-03-24 05:42:33,507] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2025-03-24 05:48:12,331] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] 05:48:44,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 05:48:44,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:48:44,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-24_05-48-44.log] [testng] 05:48:44,393 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f4dcb20 - End of configuration. [testng] [2025-03-24 05:49:09,105] [pool-1-thread-4] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2025-03-24 05:53:49,011] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2025-03-24 05:55:08,193] [pool-1-thread-8] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2025-03-24 05:58:36,862] [pool-1-thread-9] Initializing /data/converted/sebastien/test.tif: [testng] [2025-03-24 06:02:32,455] [pool-1-thread-10] Initializing /data/converted/stephan/notok2.tif: [testng] [2025-03-24 06:02:48,648] [pool-1-thread-1] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2025-03-24 06:07:02,499] [pool-1-thread-8] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] 06:10:15,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 06:10:15,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:10:15,265 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-24_06-10-15.log] [testng] 06:10:15,266 |-INFO in ch.qos.logback.core.sift.SiftProcessor@277d1199 - End of configuration. [testng] [2025-03-24 06:10:31,687] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2025-03-24 06:15:36,251] [pool-1-thread-8] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2025-03-24 06:23:16,869] [pool-1-thread-7] Initializing /data/converted/michel/c.tif: [testng] [2025-03-24 06:23:46,852] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2025-03-24 06:25:23,818] [pool-1-thread-5] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2025-03-24 06:25:51,799] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2025-03-24 06:26:30,104] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2025-03-24 06:27:12,221] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2025-03-24 06:27:31,396] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2025-03-24 06:28:47,921] [pool-1-thread-4] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2025-03-24 06:31:13,645] [pool-1-thread-4] Initializing /data/converted/michel/e.tif: [testng] [2025-03-24 06:31:34,004] [pool-1-thread-9] Initializing /data/converted/nicolas/image.tif: [testng] [2025-03-24 06:33:02,607] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2025-03-24 06:34:42,221] [pool-1-thread-4] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2025-03-24 06:36:56,852] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2025-03-24 06:38:41,549] [pool-1-thread-10] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] 06:39:59,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 06:39:59,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:39:59,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-24_06-39-59.log] [testng] 06:39:59,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4335cfd0 - End of configuration. [testng] [2025-03-24 06:47:19,689] [pool-1-thread-10] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2025-03-24 06:48:53,586] [pool-1-thread-10] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2025-03-24 06:52:02,609] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2025-03-24 06:52:08,659] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2025-03-24 06:52:14,273] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2025-03-24 06:52:44,063] [pool-1-thread-7] Initializing /data/converted/michel/a.tif: [testng] [2025-03-24 06:53:45,922] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2025-03-24 06:54:10,561] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2025-03-24 06:54:41,129] [pool-1-thread-10] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2025-03-24 06:54:53,976] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2025-03-24 06:55:34,824] [pool-1-thread-5] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2025-03-24 06:55:41,059] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2025-03-24 06:55:45,084] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2025-03-24 06:56:17,517] [pool-1-thread-10] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2025-03-24 06:57:38,594] [pool-1-thread-5] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2025-03-24 06:58:22,040] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2025-03-24 06:59:27,172] [pool-1-thread-5] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2025-03-24 07:01:29,874] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2025-03-24 07:02:54,526] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2025-03-24 07:05:23,504] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] 07:17:54,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 07:17:54,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:17:54,933 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-24_07-17-54.log] [testng] 07:17:54,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@514b78f - End of configuration. [testng] 07:18:21,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 07:18:21,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:18:21,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-24_07-18-21.log] [testng] 07:18:21,404 |-INFO in ch.qos.logback.core.sift.SiftProcessor@191a8a2 - End of configuration. [testng] [2025-03-24 07:21:13,391] [pool-1-thread-5] Initializing /data/converted/michel/b.tif: [testng] [2025-03-24 07:21:42,666] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2025-03-24 07:23:38,728] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2025-03-24 07:24:28,716] [pool-1-thread-8] Initializing /data/converted/michel/d.tif: [testng] [2025-03-24 07:25:31,151] [pool-1-thread-11] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2025-03-24 07:26:19,426] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2025-03-24 07:26:41,138] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2025-03-24 07:27:47,598] [pool-1-thread-11] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2025-03-24 07:28:32,663] [pool-1-thread-11] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2025-03-24 07:28:49,371] [pool-1-thread-9] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2025-03-24 07:29:38,344] [pool-1-thread-8] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2025-03-24 07:30:16,378] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2025-03-24 07:30:55,224] [pool-1-thread-2] Initializing /data/converted/stephan/notok1.tif: [testng] [2025-03-24 07:32:32,665] [pool-1-thread-7] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2025-03-24 07:32:40,299] [pool-1-thread-12] Initializing /data/scott/Slide133-08.tif: [testng] [2025-03-24 07:33:19,472] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2025-03-24 07:34:27,748] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2025-03-24 07:34:35,145] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2025-03-24 07:35:39,934] [pool-1-thread-4] Initializing /data/converted/lior/live+cf5b.tif: [testng] 09:31:16,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 09:31:16,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:31:16,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-24_09-31-16.log] [testng] 09:31:16,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6600cdb7 - End of configuration. [testng] 09:36:36,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 09:36:36,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:36:36,714 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-24_09-36-36.log] [testng] 09:36:36,714 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e84be9b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 377 minutes 3 seconds Finished: SUCCESS