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Started by upstream project "BIOFORMATS-test-repo" build number 390 originally caused by: Started by upstream project "Trigger" build number 414 originally caused by: Started by user devspace Restarted from build #413, stage Bio-Formats Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@19 [BIOFORMATS-test-folder@19] $ /bin/bash -xe /tmp/jenkins7736683694171052601.sh + '[' metamorph = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_61737_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:18:39,015 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 02:18:39,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 02:18:39,017 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:18:39,018 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:18:39,018 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:18:39,019 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:18:39,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:18:39,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:18:39,019 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:18:39,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:18:39,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:18:39,020 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:18:39,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:18:39,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:18:39,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:18:39,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:18:39,228 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:18:39,228 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:18:39,228 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:18:39,228 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:18:39,228 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 02:18:39,229 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 02:18:39,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 211 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-25 02:18:39,238] [main] java.version = 11.0.16 [testng] 02:18:39,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:18:39,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:39,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-25_02-18-39.log] [testng] 02:18:39,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-25 02:18:39,288] [main] testng.directory = /data [testng] [2025-03-25 02:18:39,288] [main] testng.configDirectory = /config [testng] [2025-03-25 02:18:39,298] [main] testng.multiplier = 1.0 [testng] [2025-03-25 02:18:39,299] [main] testng.in-memory = false [testng] [2025-03-25 02:18:39,299] [main] testng.allow-missing = false [testng] [2025-03-25 02:18:39,299] [main] user.language = en [testng] [2025-03-25 02:18:39,299] [main] user.country = ${user.country} [testng] [2025-03-25 02:18:39,299] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-25 03:25:06,748] [main] ---------------------------------------- [testng] [2025-03-25 03:25:06,748] [main] Total files: 14121 [testng] [2025-03-25 03:25:06,748] [main] Scan time: 3987.449 s (282 ms/file) [testng] [2025-03-25 03:25:06,748] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 261 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-25 08:33:15,772] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish6_w1FRET_s1_t1.TIF: [testng] 08:33:15,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:33:15,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:33:15,775 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-25_08-33-15.log] [testng] 08:33:15,775 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a4dfef5 - End of configuration. [testng] [2025-03-25 08:37:43,145] [pool-1-thread-12] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: [testng] 08:37:43,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 08:37:43,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:37:43,146 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-25_08-37-43.log] [testng] 08:37:43,146 |-INFO in ch.qos.logback.core.sift.SiftProcessor@156be028 - End of configuration. [testng] [2025-03-25 08:38:44,274] [pool-1-thread-11] Initializing /data/josh/2101to600b.stk: [testng] 08:38:44,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 08:38:44,274 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:38:44,274 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-25_08-38-44.log] [testng] 08:38:44,275 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d106735 - End of configuration. [testng] [2025-03-25 08:45:42,829] [pool-1-thread-10] Initializing /data/gh-2613/ScanSlide_exp1_rep0_w1confGFP_s1.tif: [testng] 08:45:42,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 08:45:42,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:45:42,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-25_08-45-42.log] [testng] 08:45:42,830 |-INFO in ch.qos.logback.core.sift.SiftProcessor@582fbe91 - End of configuration. [testng] [2025-03-25 08:46:55,180] [pool-1-thread-9] Initializing /data/josh/EditedMovies/2101to800.stk: [testng] 08:46:55,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 08:46:55,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:46:55,181 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-25_08-46-55.log] [testng] 08:46:55,181 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26d8b61d - End of configuration. [testng] [2025-03-25 08:50:18,655] [pool-1-thread-8] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment3_w1CFP-YFP FRET 446.TIF: [testng] 08:50:18,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 08:50:18,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:50:18,655 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-25_08-50-18.log] [testng] 08:50:18,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10427ac - End of configuration. [testng] [2025-03-25 08:51:35,655] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] 08:51:35,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 08:51:35,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:51:35,656 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-25_08-51-35.log] [testng] 08:51:35,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2479a142 - End of configuration. [testng] [2025-03-25 08:52:43,268] [pool-1-thread-6] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s4t41_w1Laser4054BD4BP_s1_t1.stk: [testng] 08:52:43,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:52:43,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:52:43,268 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-25_08-52-43.log] [testng] 08:52:43,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@172fb9a - End of configuration. [testng] [2025-03-25 08:54:11,551] [pool-1-thread-5] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t1.TIF: [testng] 08:54:11,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 08:54:11,551 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:54:11,551 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-25_08-54-11.log] [testng] 08:54:11,552 |-INFO in ch.qos.logback.core.sift.SiftProcessor@767cd8fc - End of configuration. [testng] [2025-03-25 08:54:51,069] [pool-1-thread-5] Used files list does not include base file [testng] [2025-03-25 08:54:51,072] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF: [testng] 08:54:51,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 08:54:51,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:54:51,072 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-25_08-54-51.log] [testng] 08:54:51,073 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e4e7df9 - End of configuration. [testng] [2025-03-25 08:55:29,356] [pool-1-thread-4] Used files list does not include base file [testng] [2025-03-25 08:55:29,359] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w1Laser4054BD4BP_OverView.tif: [testng] 08:55:29,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 08:55:29,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:55:29,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-25_08-55-29.log] [testng] 08:55:29,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c257fa5 - End of configuration. [testng] [2025-03-25 08:56:08,826] [pool-1-thread-3] Used files list does not include base file [testng] [2025-03-25 08:56:08,830] [pool-1-thread-2] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk: [testng] 08:56:08,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 08:56:08,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:56:08,830 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-25_08-56-08.log] [testng] 08:56:08,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21a16fea - End of configuration. [testng] [2025-03-25 08:59:52,567] [pool-1-thread-2] Initializing /data/samples/zserEight.stk: [testng] [2025-03-25 09:01:48,768] [pool-1-thread-10] Initializing /data/ascb/golgi marker.tif: [testng] [2025-03-25 09:04:42,955] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Sparse/Serum/Color Combine.tif: [testng] [2025-03-25 09:06:59,164] [pool-1-thread-10] Initializing /data/jmuhlich/metamorph_scan_rgb/Scan 20x obj 40_w1_s1_t1.TIF: [testng] [2025-03-25 09:08:08,554] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t1.TIF: [testng] [2025-03-25 09:09:51,299] [pool-1-thread-8] Used files list does not include base file [testng] [2025-03-25 09:09:51,301] [pool-1-thread-3] Initializing /data/qa-17827/G28P2E10-2 x5.TIF: [testng] [2025-03-25 09:11:11,701] [pool-1-thread-12] Initializing /data/jcb/201008090/3T3_ShhN_C_Chh488.stk: [testng] [2025-03-25 09:12:12,843] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_HTR5_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-25 09:18:46,718] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish3_w1FRET_s1_t1.TIF: [testng] [2025-03-25 09:33:25,989] [pool-1-thread-3] Initializing /data/grant/X.STK: [testng] [2025-03-25 09:35:06,581] [pool-1-thread-12] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t1.TIF: [testng] [2025-03-25 09:37:22,921] [pool-1-thread-12] Used files list does not include base file [testng] [2025-03-25 09:37:24,245] [pool-1-thread-9] Initializing /data/andressa/RPE/Full Confluency/Serum/Color Combine.tif: [testng] [2025-03-25 09:46:44,534] [pool-1-thread-9] Initializing /data/graham/G_Wright deconvolved.stk: [testng] [2025-03-25 09:49:44,026] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-25 09:54:15,298] [pool-1-thread-3] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_HTR5_ISOto5HT_35mmdish/5HT/Dish1_w1FRET_t1.TIF: [testng] 09:59:05,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 09:59:05,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:59:05,469 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-25_09-59-05.log] [testng] 09:59:05,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ff8ee8d - End of configuration. [testng] [2025-03-25 10:02:52,880] [pool-1-thread-9] Initializing /data/andressa/RPE/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-25 10:06:10,352] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge.TIF: [testng] [2025-03-25 10:08:34,173] [pool-1-thread-5] Initializing /data/chris/Foo/exp1_w1_s1_t1.tif: [testng] [2025-03-25 10:39:10,247] [pool-1-thread-11] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif: [testng] [2025-03-25 10:41:14,099] [pool-1-thread-11] Used files list does not include base file [testng] [2025-03-25 10:51:02,421] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t2.TIF: [testng] [2025-03-25 10:54:16,337] [pool-1-thread-8] Used files list does not include base file [testng] [2025-03-25 10:57:41,964] [pool-1-thread-10] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF: [testng] [2025-03-25 10:59:52,686] [pool-1-thread-4] Initializing /data/samples/zserSixteen.stk: [testng] [2025-03-25 11:03:51,723] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.jpg: [testng] [2025-03-25 11:08:00,137] [pool-1-thread-9] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF: [testng] [2025-03-25 11:12:35,193] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish9_w1FRET_s1_t1.TIF: [testng] [2025-03-25 11:30:54,437] [pool-1-thread-11] Initializing /data/sebastien-besson/001/120119_VimMito_001_w1DIC_t1.TIF: [testng] [2025-03-25 11:56:05,853] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211203_HTR1E_ISOto5HT_35mm/Dish1_w1FRET_t1.TIF: [testng] [2025-03-25 12:03:40,432] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-25 12:18:50,063] [pool-1-thread-6] Initializing /data/josh/2101to400bstk.stk: [testng] 12:24:56,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:24:56,848 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:24:56,850 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-25_12-24-56.log] [testng] 12:24:56,851 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78cad4b4 - End of configuration. [testng] 13:07:41,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 13:07:41,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:07:41,224 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-25_13-07-41.log] [testng] 13:07:41,224 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6571d5d9 - End of configuration. [testng] [2025-03-25 13:08:41,513] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF: [testng] [2025-03-25 13:12:14,583] [pool-1-thread-8] Used files list does not include base file [testng] [2025-03-25 13:21:37,379] [pool-1-thread-12] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t2.TIF: [testng] [2025-03-25 13:25:43,813] [pool-1-thread-12] Used files list does not include base file [testng] 13:27:24,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 13:27:24,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 13:27:24,657 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-25_13-27-24.log] [testng] 13:27:24,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11c43cf - End of configuration. [testng] [2025-03-25 15:12:48,667] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: [testng] [2025-03-25 15:30:27,220] [pool-1-thread-12] Initializing /data/samples/10xcalib.tif: Build was aborted Calling Pipeline was cancelled Finished: ABORTED