![[Jenkins]](/jenkins/static/e865dcf2/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 392 originally caused by: Started by upstream project "Trigger" build number 416 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@14 [BIOFORMATS-test-folder@14] $ /bin/bash -xe /tmp/jenkins14384739592016115983.sh + '[' targa = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_61913_merge_ci -v /uod/idr/repos/curated/targa:/data -v /uod/idr-scratch/merge-ci/curated/targa:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:10:57,450 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 01:10:57,452 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - No custom configurators were discovered as a service. [testng] 01:10:57,452 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:10:57,453 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:10:57,453 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:10:57,453 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:10:57,454 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:10:57,454 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:10:57,454 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:10:57,455 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:10:57,455 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:10:57,455 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:10:57,617 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:10:57,617 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:10:57,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:10:57,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:10:57,649 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:10:57,649 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:10:57,649 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:10:57,650 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:10:57,650 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@4310d43 - End of configuration. [testng] 01:10:57,651 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1b11171f - Registering current configuration as safe fallback point [testng] 01:10:57,651 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-27 01:10:57,659] [main] java.version = 21 [testng] 01:10:57,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:10:57,663 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:10:57,705 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-27_01-10-57.log] [testng] 01:10:57,706 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69504ae9 - End of configuration. [testng] [2025-03-27 01:10:57,708] [main] testng.directory = /data [testng] [2025-03-27 01:10:57,708] [main] testng.configDirectory = /config [testng] [2025-03-27 01:10:57,716] [main] testng.multiplier = 1.0 [testng] [2025-03-27 01:10:57,717] [main] testng.in-memory = false [testng] [2025-03-27 01:10:57,717] [main] testng.allow-missing = false [testng] [2025-03-27 01:10:57,717] [main] user.language = en [testng] [2025-03-27 01:10:57,717] [main] user.country = ${user.country} [testng] [2025-03-27 01:10:57,717] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-27 01:10:58,829] [main] ---------------------------------------- [testng] [2025-03-27 01:10:58,830] [main] Total files: 21 [testng] [2025-03-27 01:10:58,830] [main] Scan time: 1.112 s (52 ms/file) [testng] [2025-03-27 01:10:58,830] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-27 01:16:30,027] [pool-1-thread-1] Initializing /data/samples/CTC16.TGA: [testng] 01:16:30,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:16:30,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:16:30,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-27_01-16-30.log] [testng] 01:16:30,029 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f30f534 - End of configuration. [testng] [2025-03-27 01:16:42,393] [pool-1-thread-12] Initializing /data/samples/XING_B16.TGA: [testng] 01:16:42,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:16:42,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:16:42,394 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-27_01-16-42.log] [testng] 01:16:42,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a19f1cf - End of configuration. [testng] [2025-03-27 01:16:49,098] [pool-1-thread-11] Initializing /data/samples/UBW8.TGA: [testng] 01:16:49,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:16:49,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:16:49,099 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-27_01-16-49.log] [testng] 01:16:49,099 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b7a5201 - End of configuration. [testng] [2025-03-27 01:17:09,789] [pool-1-thread-10] Initializing /data/samples/CBW8.TGA: [testng] 01:17:09,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:17:09,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:09,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-27_01-17-09.log] [testng] 01:17:09,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c81b07d - End of configuration. [testng] [2025-03-27 01:17:25,531] [pool-1-thread-9] Initializing /data/samples/UTC24.TGA: [testng] 01:17:25,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:17:25,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:17:25,532 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-27_01-17-25.log] [testng] 01:17:25,532 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b2a7d18 - End of configuration. [testng] [2025-03-27 01:18:01,567] [pool-1-thread-8] Initializing /data/samples/XING_B24.TGA: [testng] 01:18:01,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:18:01,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:18:01,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-27_01-18-01.log] [testng] 01:18:01,569 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c84ce5b - End of configuration. [testng] [2025-03-27 01:18:14,730] [pool-1-thread-7] Initializing /data/samples/UTC32.TGA: [testng] 01:18:14,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:18:14,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:18:14,733 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-27_01-18-14.log] [testng] 01:18:14,733 |-INFO in ch.qos.logback.core.sift.SiftProcessor@605aff3 - End of configuration. [testng] [2025-03-27 01:18:37,663] [pool-1-thread-6] Initializing /data/samples/FLAG_T32.TGA: [testng] 01:18:37,663 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:18:37,663 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:18:37,664 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-27_01-18-37.log] [testng] 01:18:37,664 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61c5e6fa - End of configuration. [testng] [2025-03-27 01:19:02,381] [pool-1-thread-5] Initializing /data/samples/XING_B32.TGA: [testng] 01:19:02,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:19:02,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:02,382 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-27_01-19-02.log] [testng] 01:19:02,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@317aa3e - End of configuration. [testng] [2025-03-27 01:19:27,894] [pool-1-thread-4] Initializing /data/samples/FLAG_T16.TGA: [testng] 01:19:27,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:19:27,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:27,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-27_01-19-27.log] [testng] 01:19:27,895 |-INFO in ch.qos.logback.core.sift.SiftProcessor@954c1f5 - End of configuration. [testng] [2025-03-27 01:19:43,391] [pool-1-thread-3] Initializing /data/samples/FLAG_B32.TGA: [testng] 01:19:43,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:19:43,391 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:19:43,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-27_01-19-43.log] [testng] 01:19:43,392 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5300cb8d - End of configuration. [testng] [2025-03-27 01:20:06,756] [pool-1-thread-2] Initializing /data/samples/UTC16.TGA: [testng] 01:20:06,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:20:06,757 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:06,757 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-27_01-20-06.log] [testng] 01:20:06,758 |-INFO in ch.qos.logback.core.sift.SiftProcessor@378b64e6 - End of configuration. [testng] [2025-03-27 01:22:44,929] [pool-1-thread-3] Initializing /data/samples/XING_T16.TGA: [testng] [2025-03-27 01:23:10,749] [pool-1-thread-8] Initializing /data/samples/XING_T32.TGA: [testng] [2025-03-27 01:23:42,800] [pool-1-thread-6] Initializing /data/samples/UCM8.TGA: [testng] [2025-03-27 01:24:12,834] [pool-1-thread-7] Initializing /data/samples/FLAG_B24.TGA: [testng] [2025-03-27 01:24:14,875] [pool-1-thread-2] Initializing /data/samples/CCM8.TGA: [testng] [2025-03-27 01:24:38,498] [pool-1-thread-10] Initializing /data/samples/XING_T24.TGA: [testng] [2025-03-27 01:24:56,097] [pool-1-thread-11] Initializing /data/samples/MARBLES.TGA: [testng] [2025-03-27 01:25:11,854] [pool-1-thread-1] Initializing /data/samples/CTC24.TGA: [testng] [2025-03-27 01:25:35,253] [pool-1-thread-9] Initializing /data/samples/FLAG_B16.TGA: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 16 minutes 37 seconds Finished: SUCCESS