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Started by upstream project "BIOFORMATS-test-repo" build number 392 originally caused by: Started by upstream project "Trigger" build number 416 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@20 [BIOFORMATS-test-folder@20] $ /bin/bash -xe /tmp/jenkins6595020017276288205.sh + '[' zeiss-czi = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_61929_merge_ci -v /uod/idr/repos/curated/zeiss-czi:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-czi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:59:03,900 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 03:59:03,902 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - No custom configurators were discovered as a service. [testng] 03:59:03,902 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:59:03,903 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:59:03,903 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:59:03,903 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:59:03,904 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:59:03,904 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:59:03,904 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:59:03,905 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:59:03,905 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:59:03,905 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:59:04,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:59:04,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:59:04,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:59:04,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:59:04,082 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:59:04,082 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:59:04,082 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:59:04,082 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:59:04,082 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@47d9a273 - End of configuration. [testng] 03:59:04,083 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4659191b - Registering current configuration as safe fallback point [testng] 03:59:04,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@36d585c - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 179 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-27 03:59:04,092] [main] java.version = 21 [testng] 03:59:04,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:59:04,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:59:04,133 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-27_03-59-04.log] [testng] 03:59:04,134 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69504ae9 - End of configuration. [testng] [2025-03-27 03:59:04,136] [main] testng.directory = /data [testng] [2025-03-27 03:59:04,136] [main] testng.configDirectory = /config [testng] [2025-03-27 03:59:04,144] [main] testng.multiplier = 1.0 [testng] [2025-03-27 03:59:04,145] [main] testng.in-memory = false [testng] [2025-03-27 03:59:04,145] [main] testng.allow-missing = false [testng] [2025-03-27 03:59:04,145] [main] user.language = en [testng] [2025-03-27 03:59:04,145] [main] user.country = ${user.country} [testng] [2025-03-27 03:59:04,145] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-27 08:43:45,191] [main] ---------------------------------------- [testng] [2025-03-27 08:43:45,191] [main] Total files: 504 [testng] [2025-03-27 08:43:45,191] [main] Scan time: 17081.046 s (33890 ms/file) [testng] [2025-03-27 08:43:45,192] [main] ---------------------------------------- [testng] [Fatal Error] :11:3: The element type "METADATA" must be terminated by the matching end-tag "</METADATA>". [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :11:2: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:5: The element type "DataSchema" must be terminated by the matching end-tag "</DataSchema>". [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:5: The element type "DataSchema" must be terminated by the matching end-tag "</DataSchema>". [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:5: The element type "DataSchema" must be terminated by the matching end-tag "</DataSchema>". [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :11:3: The element type "METADATA" must be terminated by the matching end-tag "</METADATA>". [testng] [Fatal Error] :10:5: The element type "DataSchema" must be terminated by the matching end-tag "</DataSchema>". [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :11:2: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :11:2: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:5: The element type "DataSchema" must be terminated by the matching end-tag "</DataSchema>". [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:15: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :10:16: XML document structures must start and end within the same entity. [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] Building list of tests... [testng] Ready to test 473 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-27 15:07:38,311] [pool-1-thread-1] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/positions.czi: [testng] 15:07:38,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 15:07:38,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:07:38,312 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-27_15-07-38.log] [testng] 15:07:38,313 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35ce749b - End of configuration. [testng] [2025-03-27 15:07:49,860] [pool-1-thread-12] Initializing /data/zeiss/zstd/ZEISS_LLS_2048X_500Y_374Z_1T_2M_2C_16Bit/ZEISS_LLS_2048X_500Y_374Z_1T_2M_2C_16Bit_ZSTD0.czi: [testng] 15:07:49,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 15:07:49,861 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:07:49,861 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-27_15-07-49.log] [testng] 15:07:49,862 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70b9facd - End of configuration. [testng] [2025-03-27 15:08:01,339] [pool-1-thread-11] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/stack16bit.czi: [testng] 15:08:01,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 15:08:01,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:08:01,340 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-27_15-08-01.log] [testng] 15:08:01,340 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10114018 - End of configuration. [testng] [2025-03-27 15:08:10,252] [pool-1-thread-10] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-37-Scene-3-P3-B7-03.czi: [testng] 15:08:10,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 15:08:10,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:08:10,253 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-27_15-08-10.log] [testng] 15:08:10,254 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e8f90dd - End of configuration. [testng] [2025-03-27 15:08:18,372] [pool-1-thread-9] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-13-Scene-1-P3-F3-01.czi: [testng] 15:08:18,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 15:08:18,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:08:18,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-27_15-08-18.log] [testng] 15:08:18,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@786f8324 - End of configuration. [testng] [2025-03-27 15:08:27,229] [pool-1-thread-8] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/AiryscanCh3T1Z1/AiryscanCh3T1Z1.czi: [testng] 15:08:27,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 15:08:27,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:08:27,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-27_15-08-27.log] [testng] 15:08:27,230 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35261543 - End of configuration. [testng] [2025-03-27 15:08:38,043] [pool-1-thread-7] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-07-Scene-1-P2-A2-01.czi: [testng] 15:08:38,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 15:08:38,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:08:38,044 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-27_15-08-38.log] [testng] 15:08:38,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16948589 - End of configuration. [testng] [2025-03-27 15:08:46,275] [pool-1-thread-6] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/PALM/Palm_mitDrift.czi: [testng] 15:08:46,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 15:08:46,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:08:46,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-27_15-08-46.log] [testng] 15:08:46,276 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55aebf90 - End of configuration. [testng] [2025-03-27 15:08:56,939] [pool-1-thread-5] Initializing /data/sebastian/october-2016/96Well_Ch=1_50Wells_3x3_pro_Well.czi: [testng] 15:08:56,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 15:08:56,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:08:56,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-27_15-08-56.log] [testng] 15:08:56,940 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68dcba6d - End of configuration. [testng] [2025-03-27 15:09:30,837] [pool-1-thread-4] Initializing /data/qa-20612/Triple_Stained_Tumor_subset_02.czi: [testng] 15:09:30,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 15:09:30,837 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:30,838 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-27_15-09-30.log] [testng] 15:09:30,838 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79b629e - End of configuration. [testng] [2025-03-27 15:09:47,369] [pool-1-thread-3] Initializing /data/aaron/ticket-13186/Image1.czi: [testng] 15:09:47,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 15:09:47,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:47,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-27_15-09-47.log] [testng] 15:09:47,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4df0432c - End of configuration. [testng] [2025-03-27 15:09:59,331] [pool-1-thread-2] Initializing /data/zeiss/zstd/LLS_374Z_1T_2M_1C/ZEISS_LLS_2048X_500Y_374Z_1T_2M_1C_16Bit_Uncompressed.czi: [testng] 15:09:59,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 15:09:59,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:09:59,332 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-27_15-09-59.log] [testng] 15:09:59,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ac1715e - End of configuration. [testng] [2025-03-27 15:11:45,296] [pool-1-thread-7] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/ztacktimeposition16bit.czi: [testng] [2025-03-27 15:11:55,883] [pool-1-thread-10] Initializing /data/qa-33776/210412 DOPC-Chol 1-1 STAR600 sFCS.czi: [testng] [2025-03-27 15:13:15,598] [pool-1-thread-9] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Annotation/2C_7Z-01_Tinting_Annotationen_MeasFeatures_V03_ohneFocusPos.czi: [testng] [2025-03-27 15:13:26,668] [pool-1-thread-6] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-39-Scene-3-P2-C8-03.czi: [testng] [2025-03-27 15:13:37,896] [pool-1-thread-11] Initializing /data/aaron/101post.czi: [testng] [2025-03-27 15:13:47,432] [pool-1-thread-1] Initializing /data/olivier/EXP12 14 CD31 A.czi: [testng] [2025-03-27 15:13:57,076] [pool-1-thread-3] Initializing /data/vito/Snap-09KWi.czi: [testng] [2025-03-27 15:14:07,657] [pool-1-thread-8] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-42-Scene-3-P2-F8-03.czi: [testng] [2025-03-27 15:14:19,108] [pool-1-thread-2] Initializing /data/sebastian/12843/AxioScan_Test.czi: [testng] [2025-03-27 15:14:31,921] [pool-1-thread-12] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Annotation/2C_7Z-01_Tinting_Annotationen_MeasFeatures.czi: [testng] [2025-03-27 15:15:39,212] [pool-1-thread-4] Initializing /data/vito/FRETAcceptorbleach1_Linearunmixing.czi: [testng] [2025-03-27 15:15:56,227] [pool-1-thread-7] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-02-Scene-2-P1-E1-02.czi: [testng] [2025-03-27 15:16:09,807] [pool-1-thread-9] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/ConfocalCh1T3Z1/ConfocalCh1T3Z1.czi: [testng] [2025-03-27 15:16:26,528] [pool-1-thread-3] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-06-Scene-2-P1-A1-02.czi: [testng] [2025-03-27 15:16:35,788] [pool-1-thread-1] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-32-Scene-3-P2-E6-03.czi: [testng] [2025-03-27 15:16:43,572] [pool-1-thread-12] Initializing /data/qa-17740/215_1626_DAPi_0_tdTom_0_0_TAM_hc_cor.czi: [testng] [2025-03-27 15:16:52,395] [pool-1-thread-6] Initializing /data/zeiss/ZEN 2.1 black LSM 880 -May 2015/channel_3.czi: [testng] [2025-03-27 15:17:02,153] [pool-1-thread-8] Initializing /data/qa-9410/cav_PALM_drift_correct_Convert to Image.czi: [testng] [2025-03-27 15:17:13,623] [pool-1-thread-11] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-21-Scene-1-P3-C4-01.czi: [testng] [2025-03-27 15:18:04,381] [pool-1-thread-4] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-28-Scene-3-P2-A5-03.czi: [testng] [2025-03-27 15:18:20,720] [pool-1-thread-7] Initializing /data/vito/CalliphoraSalgld_lambda_FM4-64TMRE011.czi: [testng] [2025-03-27 15:18:37,407] [pool-1-thread-3] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-09-Scene-3-P3-C2-03.czi: [testng] [2025-03-27 15:18:47,841] [pool-1-thread-1] Initializing /data/sebastian/OME-TIFF_ROI_Wrong_from_CZI/Original_CZI_File.czi: [testng] [2025-03-27 15:19:01,929] [pool-1-thread-9] Initializing /data/mette/Mc_04-Feb-2014_Angle1.czi: [testng] [2025-03-27 15:19:13,485] [pool-1-thread-8] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-19-Scene-3-P1-A4-03.czi: [testng] [2025-03-27 15:19:23,815] [pool-1-thread-11] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-17-Scene-2-P3-B3-02.czi: [testng] [2025-03-27 15:19:31,737] [pool-1-thread-6] Initializing /data/zeiss/zstd/LLS_374Z_1T_2M_2C/ZEISS_LLS_2048X_500Y_374Z_1T_2M_2C_16Bit_ZSTD1.czi: [testng] [2025-03-27 15:19:52,682] [pool-1-thread-2] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Tiles/Partikelnormal_5x_27x37tiles_5%_comb_mBP.czi: [testng] [2025-03-27 15:20:39,566] [pool-1-thread-4] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-20-Scene-2-P1-B4-02.czi: [testng] [2025-03-27 15:20:48,106] [pool-1-thread-7] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-02-Scene-3-P3-E1-03.czi: [testng] [2025-03-27 15:21:12,379] [pool-1-thread-3] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-27-Scene-1-P3-D5-01.czi: [testng] [2025-03-27 15:21:20,518] [pool-1-thread-8] Initializing /data/qa-10431/KO100_1E.czi: [testng] [2025-03-27 15:21:35,437] [pool-1-thread-11] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Unspecified/rendertest.czi: [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [2025-03-27 15:21:48,438] [pool-1-thread-9] Initializing /data/zeiss/ZEN 2.1 black LSM 880 -May 2015/SIM verrechnet.czi: [testng] [2025-03-27 15:22:03,287] [pool-1-thread-1] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-16-Scene-3-P3-C3-03.czi: [testng] [2025-03-27 15:22:18,212] [pool-1-thread-6] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Annotation/2C_7Z-04_Tinting_Annotations.czi: [testng] [2025-03-27 15:22:38,531] [pool-1-thread-2] Initializing /data/olivier/EXP12 1 CD31 A.czi: [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [2025-03-27 15:23:45,125] [pool-1-thread-10] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/LambdaCh10T3ConvertedForZENblack/LambdaCh10T3ConvertedForZENblack.czi: [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [2025-03-27 15:24:08,553] [pool-1-thread-4] Initializing /data/vito/kaede5lsm.czi: [testng] [2025-03-27 15:24:22,173] [pool-1-thread-7] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-20-Scene-3-P2-B4-03.czi: [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [2025-03-27 15:24:46,926] [pool-1-thread-1] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-16-Scene-1-P1-C3-01.czi: [testng] [2025-03-27 15:24:57,222] [pool-1-thread-3] Initializing /data/qa-7771/WholeSection-DAPI+488_10X_stitched_fused_DAPI.czi: [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [Fatal Error] :9:2: XML document structures must start and end within the same entity. [testng] [2025-03-27 15:25:19,646] [pool-1-thread-11] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-28-Scene-2-P3-A5-02.czi: [testng] [2025-03-27 15:25:31,701] [pool-1-thread-2] Initializing /data/gh-3710/ROI 1 scene_2.czi: [testng] [2025-03-27 15:25:46,964] [pool-1-thread-6] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/PALM/04Lck10-tdEosts_Subset_Palm.czi: [testng] [2025-03-27 15:26:02,751] [pool-1-thread-9] Initializing /data/sebastian/fused/Overview_10X_DAPI_stitched_fused.czi: [testng] [2025-03-27 15:26:24,394] [pool-1-thread-10] Initializing /data/vito/ratbrainstack.czi: [testng] [2025-03-27 15:27:06,723] [pool-1-thread-7] Initializing /data/jianguo/03-01-2014_Barcode-0541-1.czi: [testng] [2025-03-27 15:27:26,582] [pool-1-thread-1] Initializing /data/zeiss/jpeg-xr/h_FL_3channel_noZ_compression85%.czi: [testng] [2025-03-27 15:27:39,722] [pool-1-thread-4] Initializing /data/zeiss/zen-2012/CellObserver SD/EB3-microtubules-GFP_H2BmCherry_2chT(SD).czi: [testng] [2025-03-27 15:28:01,433] [pool-1-thread-11] Initializing /data/zeiss/zen-2012/Young_mouse.czi: [testng] [2025-03-27 15:28:43,420] [pool-1-thread-6] Initializing /data/vito/FRETAcceptorbleach1 lambda series.czi: [testng] [2025-03-27 15:29:02,427] [pool-1-thread-10] Initializing /data/lorenz/exceptionalize.czi: [testng] [2025-03-27 15:29:17,190] [pool-1-thread-3] Initializing /data/wimpomp/zstd/yeast.czi: [testng] [2025-03-27 15:29:31,965] [pool-1-thread-2] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/AiryscanProcessedCh1T1Z5/AiryscanProcessedCh1T1Z5.czi: [testng] [2025-03-27 15:29:45,353] [pool-1-thread-9] Initializing /data/zeiss/zstd/LLS_50Z_1T_1M_1C/ZEISS_LLS_2048X_500Y_50Z_1T_1M_1C_16Bit_Uncompressed.czi: [testng] [2025-03-27 15:30:01,191] [pool-1-thread-4] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Bleach/bleach16bit.czi: [testng] [2025-03-27 15:31:06,202] [pool-1-thread-6] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-08-Scene-1-P1-B2-01.czi: [testng] [2025-03-27 15:31:21,166] [pool-1-thread-10] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/3D/NLO_ZStack_0013.czi: [testng] [2025-03-27 15:31:43,214] [pool-1-thread-2] Initializing /data/qa-7601/AxioCamICc5_bgr24_24ValidBits_1C_8Z.czi: [testng] [2025-03-27 15:31:55,370] [pool-1-thread-3] Initializing /data/imagic/1_WF_MolProbesKidney.czi: [testng] [2025-03-27 15:32:07,975] [pool-1-thread-8] Initializing /data/qa-17229/unstrained fields.czi: [testng] [2025-03-27 15:32:20,999] [pool-1-thread-9] Initializing /data/michael-porter/3x1 Tile 3 Colour Airyscan Fast SR with Z - Well 2_Airyscan Processing_Stitch.czi: [testng] [2025-03-27 15:32:36,885] [pool-1-thread-4] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/AiryscanProcessedCh1T3Z1/AiryscanProcessedCh1T3Z1.czi: [testng] [2025-03-27 15:33:22,624] [pool-1-thread-6] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-05-Scene-1-P3-B1-01.czi: [testng] [2025-03-27 15:33:45,606] [pool-1-thread-10] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/Channel-ZStack-LineScan-Bidirectional-Averaging.czi: [testng] [2025-03-27 15:33:58,311] [pool-1-thread-2] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/ScanModes/LineScan_Z200.czi: [testng] [2025-03-27 15:34:10,012] [pool-1-thread-3] Initializing /data/zeiss/ZEN 2.1 black LSM 880 -May 2015/WF.czi: [testng] [2025-03-27 15:34:22,076] [pool-1-thread-11] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/AiryscanProcessedCh3T1Z5/AiryscanProcessedCh3T1Z5.czi: [testng] [2025-03-27 15:34:34,479] [pool-1-thread-4] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/ScanModes/LineScan_T3500.czi: [testng] [2025-03-27 15:34:44,519] [pool-1-thread-7] Initializing /data/zeiss/zen-2012/CellObserver SD/LLC-PK1_TubX-emerald_H2B-mCherry-2chZ(SD).czi: [testng] [2025-03-27 15:34:58,356] [pool-1-thread-5] Initializing /data/zeiss/ZEN 2.1 black LSM 880 -May 2015/MT-Tilescan2-3unstitched.czi: [testng] [2025-03-27 15:35:21,916] [pool-1-thread-8] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/ConfocalCh1T15Z1Bleaching2ROIs/ConfocalCh1T15Z1Bleaching2ROIs.czi: [testng] [2025-03-27 15:35:37,797] [pool-1-thread-1] Initializing /data/michael-porter/EB01 - Airyscan Fast SR 20x_Airyscan Processing.czi: [testng] [2025-03-27 15:35:56,176] [pool-1-thread-9] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-33-Scene-2-P3-F6-02.czi: [testng] [2025-03-27 15:36:18,416] [pool-1-thread-6] Initializing /data/samples/test.czi: [testng] [2025-03-27 15:36:50,199] [pool-1-thread-11] Initializing /data/zeiss/zstd/LLS_374Z_1T_2M_2C/ZEISS_LLS_2048X_500Y_374Z_1T_2M_2C_16Bit_Uncompressed.czi: [testng] [2025-03-27 15:37:01,753] [pool-1-thread-10] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-29-Scene-2-P2-A6-02.czi: [testng] [2025-03-27 15:37:12,267] [pool-1-thread-3] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/Channel-Positions.czi: [testng] [2025-03-27 15:37:26,666] [pool-1-thread-2] Initializing /data/sebastian/OME-TIFF_ROI_Wrong_from_CZI/Screenshot_ZEN_with_ROIs.png: [testng] [2025-03-27 15:37:36,165] [pool-1-thread-8] Initializing /data/qa-16882/allSeriesContainSignal.czi: [testng] [2025-03-27 15:37:45,238] [pool-1-thread-4] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-25-Scene-1-P1-F5-01.czi: [testng] [2025-03-27 15:37:57,856] [pool-1-thread-7] Initializing /data/zeiss/zstd/LLS_50Z_1T_1M_2C/ZEISS_LLS_2048X_500Y_50Z_1T_1M_2C_16Bit_ZSTD1.czi: [testng] [2025-03-27 15:38:19,032] [pool-1-thread-5] Initializing /data/zeiss/zen-2012/CellObserver SD/LLC-PK1_2chTZ-triggered-20msec(SD).czi: [testng] [2025-03-27 15:38:46,012] [pool-1-thread-9] Initializing /data/zeiss/ZEN 2.1 black LSM 880 -May 2015/TileZstack5_NichtGestitchen.czi: [testng] [2025-03-27 15:39:00,070] [pool-1-thread-1] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-09-Scene-2-P1-C2-02.czi: [testng] [2025-03-27 15:39:13,840] [pool-1-thread-2] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-30-Scene-1-P3-C6-01.czi: [testng] [2025-03-27 15:39:48,921] [pool-1-thread-10] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/LambdaCh10T1/LambdaCh10T1.czi: [testng] [2025-03-27 15:40:16,275] [pool-1-thread-11] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-31-Scene-1-P1-D6-01.czi: [testng] [2025-03-27 15:40:28,820] [pool-1-thread-3] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/Maiglckchen.czi: [testng] [2025-03-27 15:40:44,317] [pool-1-thread-4] Initializing /data/bruno/Snap-8070.czi: [testng] [2025-03-27 15:40:56,571] [pool-1-thread-1] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-18-Scene-2-P3-A3-02.czi: [testng] [2025-03-27 15:41:07,136] [pool-1-thread-7] Initializing /data/zeiss/zen-2012/CellObserver SD/Micrasterias fimbriata#1_2chTZ(SD).czi: [testng] [2025-03-27 15:42:27,947] [pool-1-thread-8] Initializing /data/zeiss/jpeg-xr/k_FL_3channel_noZ_compression lossless.czi: [testng] [2025-03-27 15:42:42,002] [pool-1-thread-12] Initializing /data/zeiss/zstd/ZEISS_LLS_2048X_500Y_1Z_50T_1M_2C_16Bit/ZEISS_LLS_2048X_500Y_1Z_50T_1M_2C_16Bit_Uncompressed.czi: [testng] [2025-03-27 15:42:53,339] [pool-1-thread-9] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-22-Scene-3-P1-D4-03.czi: [testng] [2025-03-27 15:43:03,245] [pool-1-thread-2] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/Anettes nice Stack.czi: [testng] [2025-03-27 15:43:18,378] [pool-1-thread-6] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Annotation/2C_7Z-01_Tinting_Annotationen_MeasFeatures_V03.czi: [testng] [2025-03-27 15:43:35,512] [pool-1-thread-5] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-13-Scene-3-P2-F3-03.czi: [testng] [2025-03-27 15:44:07,253] [pool-1-thread-10] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-28-Scene-1-P1-A5-01.czi: [testng] [2025-03-27 15:44:20,317] [pool-1-thread-3] Initializing /data/qa-7748/IP-Stitching-04.czi: [testng] [2025-03-27 15:44:31,479] [pool-1-thread-11] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/DCV_LSM/LysoTracker-DAPI_ZSTack_002.czi: [testng] [2025-03-27 15:44:49,513] [pool-1-thread-1] Initializing /data/michael/multipos-z-time-channel-tile.czi: [testng] [2025-03-27 15:45:01,024] [pool-1-thread-9] Initializing /data/qa-4981/CZI linescanbug/f01.czi: [testng] [2025-03-27 15:45:12,928] [pool-1-thread-4] Initializing /data/nottingham/incorrect-colors/Image 6_Structured Illumination.czi: [testng] [2025-03-27 15:45:22,480] [pool-1-thread-2] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/AiryscanCh3T3Z1/AiryscanCh3T3Z1.czi: [testng] [2025-03-27 15:45:36,674] [pool-1-thread-12] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-03-Scene-1-P1-D1-01.czi: [testng] [2025-03-27 15:45:49,963] [pool-1-thread-6] Initializing /data/vito/hp1am26zelle14 RICS.czi: [testng] [2025-03-27 15:46:03,147] [pool-1-thread-5] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-32-Scene-2-P1-E6-02.czi: [testng] [2025-03-27 15:46:45,518] [pool-1-thread-10] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/DCV_LSM/Amphioxus_2CH_ZStack_002.czi: [testng] [2025-03-27 15:47:13,183] [pool-1-thread-11] Initializing /data/qa-4981/CZI linescanbug/metadata in zenblack.png: [testng] [2025-03-27 15:47:19,221] [pool-1-thread-12] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-11-Scene-2-P1-E2-02.czi: [testng] [2025-03-27 15:47:37,535] [pool-1-thread-11] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-23-Scene-3-P2-E4-03.czi: [testng] [2025-03-27 15:47:51,950] [pool-1-thread-2] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-09-Scene-1-P2-C2-01.czi: [testng] [2025-03-27 15:48:07,210] [pool-1-thread-9] Initializing /data/zeiss/zstd/ZEISS_LLS_2048X_500Y_374Z_1T_2M_2C_16Bit/ZEISS_LLS_2048X_500Y_374Z_1T_2M_2C_16Bit_ZSTD0_from_Uncompressed.czi: [testng] [2025-03-27 15:48:22,269] [pool-1-thread-4] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-41-Scene-2-P1-E8-02.czi: [testng] [2025-03-27 15:48:37,492] [pool-1-thread-1] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/ztacktimeposition.czi: [testng] [2025-03-27 15:48:49,867] [pool-1-thread-5] Initializing /data/zeiss/ZEN 2.1 black LSM 880 -May 2015/Time_Bleaching_Marker_BleachROI.czi: [testng] [2025-03-27 15:49:01,371] [pool-1-thread-6] Initializing /data/vito/volvox25_rotate.czi: [testng] [2025-03-27 15:49:23,982] [pool-1-thread-3] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-31-Scene-3-P3-D6-03.czi: [testng] [2025-03-27 15:49:53,526] [pool-1-thread-10] Initializing /data/vito/zf_psa.czi: [testng] [2025-03-27 15:50:17,672] [pool-1-thread-12] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/timeserie16bit.czi: [testng] [2025-03-27 15:50:27,124] [pool-1-thread-11] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Unspecified/Pollen-Z-stack.czi: [testng] [2025-03-27 15:50:43,421] [pool-1-thread-2] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/Misc/Channel-ZStack-LineScan-Averaging-HDR-Sampling-Zoom3.7.czi: [testng] [2025-03-27 15:50:59,834] [pool-1-thread-4] Initializing /data/zeiss/zstd/8bit/ZEISS_LSM_512X_512Y_1Z_1T_1M_1C_8Bit_ZSTD0.czi: [testng] [2025-03-27 15:51:06,419] [pool-1-thread-5] Initializing /data/zeiss/dvds/lsm-disk1/CZI-Example Data LSM/ScanModes/SpotScan_T50000.czi: [testng] [2025-03-27 15:51:16,047] [pool-1-thread-9] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-29-Scene-3-P3-A6-03.czi: [testng] [2025-03-27 15:51:25,004] [pool-1-thread-1] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/AiryscanCh1T1Z1/AiryscanCh1T1Z1.czi: [testng] [2025-03-27 15:51:34,032] [pool-1-thread-6] Initializing /data/zeiss/ZEN 2.1 black LSM 880 -May 2015/Fluo#1_ZEN2-1-Airyscan.czi: [testng] [2025-03-27 15:52:02,612] [pool-1-thread-3] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-Scene-1-P2-F1-01.czi: [testng] [2025-03-27 15:52:43,545] [pool-1-thread-8] Initializing /data/aaron/101post.tiff: [testng] [2025-03-27 15:54:20,841] [pool-1-thread-10] Initializing /data/zeiss/dvds/wf-disk1/CZI Test WF/CZI-Example Data WF/Unspecified/C195 Collate 3 A.czi: [testng] [2025-03-27 15:54:30,368] [pool-1-thread-11] Initializing /data/zeiss/ZEN 2.1 blue LSM 800 -May2015/ConfocalCh3T1Z1/ConfocalCh3T1Z1.czi: [testng] [2025-03-27 15:54:42,595] [pool-1-thread-12] Initializing /data/gh-3710/ROI 1 scene 1.czi: [testng] [2025-03-27 15:55:18,221] [pool-1-thread-2] Initializing /data/zeiss/zstd/ZEISS_LLS_2048X_500Y_1Z_50T_1M_2C_16Bit/ZEISS_LLS_2048X_500Y_1Z_50T_1M_2C_16Bit_ZSTD0.czi: [testng] [2025-03-27 15:55:46,291] [pool-1-thread-4] Initializing /data/gh-2377/20160425_BF_CZI.czi: [testng] [2025-03-27 15:56:01,268] [pool-1-thread-1] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-18-Scene-3-P2-A3-03.czi: [testng] [2025-03-27 15:56:21,257] [pool-1-thread-9] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-23-Scene-2-P1-E4-02.czi: [testng] [2025-03-27 15:56:31,852] [pool-1-thread-3] Initializing /data/public/idr0011/Plate1-Blue-A_TS-Stinger/Plate1-Blue-A-34-Scene-1-P1-F7-01.czi: [testng] [2025-03-27 15:56:46,920] [pool-1-thread-6] Initializing /data/public/zenodo-10577186/2023_11_30__RecognizedCode-27-Deconvolution (defaults)-11.czi: Build was aborted Calling Pipeline was cancelled Finished: ABORTED