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Started by upstream project "BIOFORMATS-test-repo" build number 393 originally caused by: Started by upstream project "Trigger" build number 418 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@13 [BIOFORMATS-test-folder@13] $ /bin/bash -xe /tmp/jenkins16726174925730134037.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_62016_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 06:44:35,390 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 06:44:35,392 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - No custom configurators were discovered as a service. [testng] 06:44:35,392 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:44:35,393 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:44:35,393 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 06:44:35,393 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 06:44:35,393 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 06:44:35,393 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:44:35,394 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:44:35,394 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 06:44:35,394 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 06:44:35,394 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 06:44:35,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 06:44:35,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 06:44:35,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 06:44:35,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 06:44:35,642 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 06:44:35,642 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 06:44:35,642 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 06:44:35,642 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 06:44:35,643 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@63355449 - End of configuration. [testng] 06:44:35,643 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48ae9b55 - Registering current configuration as safe fallback point [testng] 06:44:35,643 |-INFO in ch.qos.logback.classic.util.ContextInitializer@7ff95560 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 249 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-28 06:44:35,653] [main] java.version = 1.8.0_342 [testng] 06:44:35,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:44:35,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:44:35,699 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-28_06-44-35.log] [testng] 06:44:35,701 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d7657 - End of configuration. [testng] [2025-03-28 06:44:35,703] [main] testng.directory = /data [testng] [2025-03-28 06:44:35,703] [main] testng.configDirectory = /config [testng] [2025-03-28 06:44:35,715] [main] testng.multiplier = 1.0 [testng] [2025-03-28 06:44:35,715] [main] testng.in-memory = false [testng] [2025-03-28 06:44:35,715] [main] testng.allow-missing = false [testng] [2025-03-28 06:44:35,715] [main] user.language = en [testng] [2025-03-28 06:44:35,715] [main] user.country = ${user.country} [testng] [2025-03-28 06:44:35,715] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2025-03-28 06:49:27,634] [main] ---------------------------------------- [testng] [2025-03-28 06:49:27,634] [main] Total files: 259 [testng] [2025-03-28 06:49:27,634] [main] Scan time: 291.919 s (1127 ms/file) [testng] [2025-03-28 06:49:27,634] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-28 08:38:03,355] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 08:38:03,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:38:03,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:38:03,357 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-28_08-38-03.log] [testng] 08:38:03,357 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52f87ee8 - End of configuration. [testng] [2025-03-28 08:38:38,707] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 08:38:38,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 08:38:38,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:38:38,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-28_08-38-38.log] [testng] 08:38:38,710 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36b7814c - End of configuration. [testng] [2025-03-28 08:38:46,877] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 08:38:46,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 08:38:46,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:38:46,878 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-28_08-38-46.log] [testng] 08:38:46,878 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56e9fb5a - End of configuration. [testng] [2025-03-28 08:40:30,706] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 08:40:30,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 08:40:30,706 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:40:30,707 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-28_08-40-30.log] [testng] 08:40:30,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40ef7379 - End of configuration. [testng] [2025-03-28 08:40:40,478] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 08:40:40,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 08:40:40,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:40:40,479 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-28_08-40-40.log] [testng] 08:40:40,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ffd3a4b - End of configuration. [testng] [2025-03-28 08:40:46,123] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 08:40:46,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 08:40:46,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:40:46,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-28_08-40-46.log] [testng] 08:40:46,124 |-INFO in ch.qos.logback.core.sift.SiftProcessor@abd9ffa - End of configuration. [testng] [2025-03-28 08:40:54,779] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 08:40:54,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 08:40:54,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:40:54,779 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-28_08-40-54.log] [testng] 08:40:54,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@483d0361 - End of configuration. [testng] [2025-03-28 08:43:50,943] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 08:43:50,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:43:50,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:43:50,944 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-28_08-43-50.log] [testng] 08:43:50,944 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6913b3b5 - End of configuration. [testng] [2025-03-28 08:43:59,614] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 08:43:59,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 08:43:59,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:43:59,615 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-28_08-43-59.log] [testng] 08:43:59,616 |-INFO in ch.qos.logback.core.sift.SiftProcessor@349e2538 - End of configuration. [testng] [2025-03-28 08:44:11,508] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 08:44:11,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 08:44:11,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:44:11,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-28_08-44-11.log] [testng] 08:44:11,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72363211 - End of configuration. [testng] [2025-03-28 08:47:23,880] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 08:47:23,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 08:47:23,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:47:23,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-28_08-47-23.log] [testng] 08:47:23,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@528a3548 - End of configuration. [testng] [2025-03-28 08:47:36,793] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 08:47:36,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 08:47:36,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:47:36,794 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-28_08-47-36.log] [testng] 08:47:36,794 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19ede70e - End of configuration. [testng] [2025-03-28 08:48:41,404] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2025-03-28 08:48:43,522] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2025-03-28 08:49:26,188] [pool-1-thread-8] Initializing /data/glen/seqlinestack.oif: [testng] [2025-03-28 08:51:02,066] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2025-03-28 08:51:11,294] [pool-1-thread-10] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2025-03-28 08:51:20,880] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp: [testng] [2025-03-28 08:51:43,501] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2025-03-28 08:51:52,855] [pool-1-thread-6] Initializing /data/brian/Lambda10nm.oib: [testng] [2025-03-28 08:52:29,473] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2025-03-28 08:52:54,711] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2025-03-28 08:53:09,573] [pool-1-thread-6] Initializing /data/molly/11OCT3.OIF: [testng] [2025-03-28 09:05:13,195] [pool-1-thread-9] Initializing /data/glen/simulstack.oib: [testng] [2025-03-28 09:05:26,206] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2025-03-28 09:07:42,992] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2025-03-28 09:07:45,250] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2025-03-28 09:08:13,926] [pool-1-thread-9] Initializing /data/glen/singleseqline.oib: [testng] [2025-03-28 09:08:31,239] [pool-1-thread-10] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2025-03-28 09:08:39,062] [pool-1-thread-5] Initializing /data/monica/Image0056.oif: [testng] [2025-03-28 09:08:49,517] [pool-1-thread-3] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2025-03-28 09:09:15,318] [pool-1-thread-9] Initializing /data/francesco/fGfp.c15.oib: [testng] [2025-03-28 09:09:25,600] [pool-1-thread-10] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2025-03-28 09:09:43,808] [pool-1-thread-3] Initializing /data/brian/PA-GFP-3.oib: [testng] [2025-03-28 09:10:08,282] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2025-03-28 09:10:34,550] [pool-1-thread-3] Initializing /data/glen/111407.oif: [testng] [2025-03-28 09:11:15,336] [pool-1-thread-10] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2025-03-28 09:12:03,971] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif: [testng] [2025-03-28 09:16:14,490] [pool-1-thread-5] Initializing /data/glen/notsaturated.oif: [testng] [2025-03-28 09:19:55,450] [pool-1-thread-9] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2025-03-28 09:20:36,996] [pool-1-thread-9] Initializing /data/brian/CFP-GFP2.oib: [testng] [2025-03-28 09:21:18,626] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2025-03-28 09:21:55,515] [pool-1-thread-9] Initializing /data/glen/Image0002.oif: [testng] 09:57:07,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 09:57:07,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:57:07,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-28_09-57-07.log] [testng] 09:57:07,567 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64d77cee - End of configuration. [testng] 09:59:45,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 09:59:45,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:59:45,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-28_09-59-45.log] [testng] 09:59:45,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d88fc67 - End of configuration. [testng] [2025-03-28 10:11:47,401] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oib: [testng] [2025-03-28 10:12:36,573] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2025-03-28 10:13:30,008] [pool-1-thread-2] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2025-03-28 10:27:23,363] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2025-03-28 10:28:06,742] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2025-03-28 10:29:13,171] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2025-03-28 10:31:59,825] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2025-03-28 10:32:18,000] [pool-1-thread-5] Initializing /data/tom/zseries-test.oib: [testng] [2025-03-28 10:33:17,130] [pool-1-thread-5] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2025-03-28 10:34:15,609] [pool-1-thread-5] Initializing /data/yasunori/series_1.oib: [testng] [2025-03-28 10:35:09,945] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2025-03-28 10:36:12,205] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2025-03-28 10:37:05,440] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2025-03-28 10:37:28,838] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2025-03-28 10:38:31,573] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2025-03-28 10:38:57,921] [pool-1-thread-1] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2025-03-28 10:39:52,731] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2025-03-28 10:56:41,944] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2025-03-28 10:57:27,176] [pool-1-thread-2] Initializing /data/david/Image0016.oif: [testng] [2025-03-28 11:09:58,244] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] [2025-03-28 11:15:27,273] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2025-03-28 11:15:44,272] [pool-1-thread-2] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2025-03-28 11:16:45,482] [pool-1-thread-2] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2025-03-28 11:23:01,618] [pool-1-thread-2] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2025-03-28 11:23:41,665] [pool-1-thread-2] Initializing /data/brian/lambda02nm.oib: [testng] [2025-03-28 11:24:19,373] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2025-03-28 11:25:00,848] [pool-1-thread-2] Initializing /data/karl/Image0009.oib: [testng] [2025-03-28 11:25:50,187] [pool-1-thread-2] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2025-03-28 11:26:45,757] [pool-1-thread-2] Initializing /data/glen/4205basal106072.oif: [testng] 11:30:14,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 11:30:14,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:30:14,942 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-28_11-30-14.log] [testng] 11:30:14,943 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ec92f0c - End of configuration. [testng] [2025-03-28 11:36:16,988] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2025-03-28 11:37:17,092] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2025-03-28 11:38:20,994] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib: [testng] [2025-03-28 11:39:34,758] [pool-1-thread-3] Initializing /data/molly/11OCT9.OIF: [testng] 11:40:37,093 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 11:40:37,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 11:40:37,094 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-28_11-40-37.log] [testng] 11:40:37,094 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6065d572 - End of configuration. [testng] [2025-03-28 11:47:04,824] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2025-03-28 11:47:45,214] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2025-03-28 11:48:33,011] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2025-03-28 11:49:38,916] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2025-03-28 11:50:46,691] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: [testng] [2025-03-28 11:51:45,559] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2025-03-28 11:52:38,698] [pool-1-thread-1] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2025-03-28 11:53:31,681] [pool-1-thread-1] Initializing /data/simon/never_worked.oib: [testng] [2025-03-28 11:54:24,002] [pool-1-thread-1] Initializing /data/johannes/step1.bmp: [testng] [2025-03-28 11:54:47,877] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2025-03-28 11:55:57,368] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib: [testng] [2025-03-28 11:56:55,233] [pool-1-thread-1] Initializing /data/stefan/cytosol_03e.oib: [testng] [2025-03-28 11:57:50,683] [pool-1-thread-1] Initializing /data/molly/11OCT8.OIF: [testng] [2025-03-28 12:09:49,017] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2025-03-28 12:10:43,256] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2025-03-28 12:11:35,009] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2025-03-28 12:12:22,492] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2025-03-28 12:13:02,422] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2025-03-28 12:13:20,228] [pool-1-thread-7] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2025-03-28 12:13:54,063] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2025-03-28 12:14:26,894] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2025-03-28 12:15:04,321] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2025-03-28 12:15:42,582] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif: [testng] [2025-03-28 12:18:02,067] [pool-1-thread-9] Initializing /data/stefan/cytosol_01a.oif: [testng] 12:29:46,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:29:46,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:29:46,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-28_12-29-46.log] [testng] 12:29:46,722 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ab52200 - End of configuration. [testng] [2025-03-28 12:31:03,710] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2025-03-28 12:31:10,397] [pool-1-thread-4] Initializing /data/david/Image0016.oib: [testng] [2025-03-28 12:31:44,303] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2025-03-28 12:31:56,213] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2025-03-28 12:34:46,399] [pool-1-thread-7] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2025-03-28 12:35:29,523] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2025-03-28 12:37:54,829] [pool-1-thread-10] Initializing /data/allan/62909#1.oib: [testng] [2025-03-28 12:38:41,337] [pool-1-thread-10] Initializing /data/molly/11OCT11.OIF: [testng] 12:40:29,792 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:40:29,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:40:29,794 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-28_12-40-29.log] [testng] 12:40:29,794 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ab79c04 - End of configuration. [testng] [2025-03-28 13:01:09,157] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2025-03-28 13:13:46,263] [pool-1-thread-8] Initializing /data/brian/LILY POLLEN.oib: [testng] [2025-03-28 13:14:32,602] [pool-1-thread-8] Initializing /data/molly/11OCT10.OIF: [testng] [2025-03-28 13:47:51,626] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2025-03-28 13:48:56,257] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2025-03-28 13:54:04,424] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2025-03-28 13:55:23,458] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2025-03-28 13:57:11,157] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2025-03-28 14:23:51,123] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2025-03-28 16:54:07,445] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2025-03-28 16:57:08,754] [pool-1-thread-7] Initializing /data/qa-17748/Image0098.oib: [testng] [2025-03-28 16:58:07,922] [pool-1-thread-7] Initializing /data/stephane/817A_3-0003_01.oib: [testng] 16:58:42,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 16:58:42,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 16:58:42,622 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-28_16-58-42.log] [testng] 16:58:42,622 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f4bf355 - End of configuration. [testng] [2025-03-28 16:58:57,779] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi: [testng] [2025-03-28 16:59:36,805] [pool-1-thread-7] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2025-03-28 17:00:34,754] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] [2025-03-28 17:01:39,980] [pool-1-thread-7] Initializing /data/stefan/cytosol_08b.oif: [testng] 17:07:57,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 17:07:57,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:07:57,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-28_17-07-57.log] [testng] 17:07:57,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6333300c - End of configuration. [testng] 21:56:59,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 21:56:59,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 21:56:59,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-28_21-56-59.log] [testng] 21:56:59,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b4fa86a - End of configuration. [testng] [2025-03-28 22:14:27,463] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: [testng] [2025-03-28 23:00:19,522] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2025-03-28 23:06:23,317] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2025-03-28 23:21:19,146] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2025-03-28 23:28:39,275] [pool-1-thread-1] Initializing /data/johannes/step4.bmp: [testng] [2025-03-28 23:31:47,266] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] [2025-03-28 23:33:42,318] [pool-1-thread-1] Initializing /data/simon/used_to_work.oib: [testng] [2025-03-28 23:37:50,422] [pool-1-thread-1] Initializing /data/johannes/step3.bmp: [testng] [2025-03-28 23:39:46,149] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2025-03-28 23:45:54,359] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2025-03-28 23:50:26,049] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2025-03-28 23:54:41,053] [pool-1-thread-1] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2025-03-28 23:58:12,402] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2025-03-29 00:40:37,157] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2025-03-29 00:41:57,130] [pool-1-thread-4] Initializing /data/jae/Image0001.oib: [testng] [2025-03-29 00:42:48,485] [pool-1-thread-2] Initializing /data/glen/singlesimul.oif: [testng] [2025-03-29 00:43:40,596] [pool-1-thread-4] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2025-03-29 01:00:46,719] [pool-1-thread-2] Initializing /data/marc/V0606L.oib: [testng] [2025-03-29 01:02:28,306] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2025-03-29 01:04:06,726] [pool-1-thread-2] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 01:32:01,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:32:01,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:01,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-29_01-32-01.log] [testng] 01:32:01,946 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b0accc1 - End of configuration. [testng] 01:59:55,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:59:55,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:59:55,899 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-29_01-59-55.log] [testng] 01:59:55,899 |-INFO in ch.qos.logback.core.sift.SiftProcessor@400cd6cc - End of configuration. [testng] 02:16:22,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:16:22,132 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:16:22,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-29_02-16-22.log] [testng] 02:16:22,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1798714d - End of configuration. Build was aborted Calling Pipeline was cancelled Finished: ABORTED