Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 44
originally caused by:
 Started by upstream project "Trigger" build number 51
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins13337727419982515057.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_6216_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:21:31,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:21:31,086 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
   [testng] 01:21:31,086 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:31,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:31,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:21:31,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:21:31,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:21:31,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:31,089 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:31,089 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:21:31,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:21:31,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:21:31,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:21:31,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:21:31,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:21:31,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:21:31,319 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:21:31,320 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:21:31,320 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:21:31,320 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:21:31,320 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
   [testng] 01:21:31,321 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
   [testng] 01:21:31,322 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 233 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-25 01:21:31,332] [main] java.version = 21
   [testng] 01:21:31,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:21:31,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:31,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-25_01-21-31.log]
   [testng] 01:21:31,409 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
   [testng] [2024-04-25 01:21:31,411] [main] testng.directory = /data
   [testng] [2024-04-25 01:21:31,412] [main] testng.configDirectory = /config
   [testng] [2024-04-25 01:21:31,426] [main] testng.multiplier = 1.0
   [testng] [2024-04-25 01:21:31,426] [main] testng.in-memory = false
   [testng] [2024-04-25 01:21:31,427] [main] testng.allow-missing = false
   [testng] [2024-04-25 01:21:31,427] [main] user.language = en
   [testng] [2024-04-25 01:21:31,427] [main] user.country = ${user.country}
   [testng] [2024-04-25 01:21:31,427] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-04-25 01:21:47,967] [main] ----------------------------------------
   [testng] [2024-04-25 01:21:47,967] [main] Total files: 283
   [testng] [2024-04-25 01:21:47,968] [main] Scan time: 16.54 s (58 ms/file)
   [testng] [2024-04-25 01:21:47,968] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-25 01:30:04,389] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir: 
   [testng] 01:30:04,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:30:04,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:04,391 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-25_01-30-04.log]
   [testng] 01:30:04,392 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bf71638 - End of configuration.
   [testng] [2024-04-25 01:30:05,686] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] 01:30:05,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:30:05,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:05,687 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-25_01-30-05.log]
   [testng] 01:30:05,687 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7890a2fb - End of configuration.
   [testng] [2024-04-25 01:30:05,775] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] 01:30:05,775 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:30:05,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:05,776 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-25_01-30-05.log]
   [testng] 01:30:05,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14b79f8e - End of configuration.
   [testng] [2024-04-25 01:30:06,210] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] 01:30:06,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:30:06,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:06,211 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-25_01-30-06.log]
   [testng] 01:30:06,211 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f5e9802 - End of configuration.
   [testng] [2024-04-25 01:30:06,259] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir: 
   [testng] 01:30:06,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:30:06,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:06,261 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-25_01-30-06.log]
   [testng] 01:30:06,261 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73e187b - End of configuration.
   [testng] [2024-04-25 01:30:25,820] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir: 
   [testng] 01:30:25,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:30:25,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:25,822 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-25_01-30-25.log]
   [testng] 01:30:25,823 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b92c0b1 - End of configuration.
   [testng] [2024-04-25 01:30:26,267] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] 01:30:26,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:30:26,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:26,268 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-25_01-30-26.log]
   [testng] 01:30:26,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@190de6e9 - End of configuration.
   [testng] [2024-04-25 01:30:26,335] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] 01:30:26,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:30:26,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:26,336 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-25_01-30-26.log]
   [testng] 01:30:26,337 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65bd42e8 - End of configuration.
   [testng] [2024-04-25 01:30:26,441] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] 01:30:26,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:30:26,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:26,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-25_01-30-26.log]
   [testng] 01:30:26,443 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73ceb51d - End of configuration.
   [testng] [2024-04-25 01:30:49,282] [pool-1-thread-4] Initializing /data/qa-17335/1.ome.tif: 
   [testng] 01:30:49,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:30:49,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:49,285 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-25_01-30-49.log]
   [testng] 01:30:49,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cdc5635 - End of configuration.
   [testng] [2024-04-25 01:30:49,357] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] 01:30:49,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:30:49,357 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:49,358 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-25_01-30-49.log]
   [testng] 01:30:49,358 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e91ce9b - End of configuration.
   [testng] [2024-04-25 01:30:49,419] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] 01:30:49,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:30:49,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:49,420 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-25_01-30-49.log]
   [testng] 01:30:49,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12528488 - End of configuration.
   [testng] [2024-04-25 01:30:52,580] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-04-25 01:30:52,701] [pool-1-thread-6] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-04-25 01:30:53,191] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-04-25 01:30:53,559] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-04-25 01:30:53,636] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-04-25 01:30:53,859] [pool-1-thread-4] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-04-25 01:31:00,615] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-04-25 01:31:01,881] [pool-1-thread-10] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-04-25 01:31:02,105] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-04-25 01:31:02,223] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-04-25 01:31:02,317] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2024-04-25 01:31:02,751] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-04-25 01:31:03,323] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-04-25 01:31:03,945] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-04-25 01:31:04,188] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-04-25 01:31:04,379] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-04-25 01:31:04,477] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-04-25 01:31:04,597] [pool-1-thread-11] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-04-25 01:31:05,339] [pool-1-thread-6] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-04-25 01:31:05,735] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-04-25 01:31:05,906] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-04-25 01:31:06,045] [pool-1-thread-8] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-04-25 01:31:36,191] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2024-04-25 01:31:36,626] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-04-25 01:31:37,024] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-04-25 01:31:37,196] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-04-25 01:31:37,514] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-04-25 01:31:37,592] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] [2024-04-25 01:31:37,768] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] [2024-04-25 01:31:38,814] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-04-25 01:31:38,908] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-04-25 01:31:39,186] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-04-25 01:31:39,224] [pool-1-thread-6] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-04-25 01:31:39,331] [pool-1-thread-3] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-04-25 01:31:39,484] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-04-25 01:31:39,621] [pool-1-thread-7] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-04-25 01:31:40,591] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-04-25 01:31:41,238] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-04-25 01:31:41,362] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2024-04-25 01:31:41,498] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-04-25 01:31:41,717] [pool-1-thread-1] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-04-25 01:31:42,788] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-04-25 01:31:42,913] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-04-25 01:31:42,980] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-04-25 01:31:43,203] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-04-25 01:31:43,348] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-04-25 01:31:43,529] [pool-1-thread-3] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-04-25 01:31:43,695] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-04-25 01:31:44,654] [pool-1-thread-1] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-04-25 01:31:44,861] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-04-25 01:31:44,909] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2024-04-25 01:31:45,178] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2024-04-25 01:31:45,646] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-04-25 01:31:45,843] [pool-1-thread-12] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-04-25 01:31:45,886] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-04-25 01:31:46,015] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-04-25 01:31:47,192] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-04-25 01:31:47,428] [pool-1-thread-12] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-04-25 01:31:47,615] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-04-25 01:31:47,824] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-04-25 01:31:48,695] [pool-1-thread-10] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-04-25 01:31:49,651] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2024-04-25 01:31:49,838] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-04-25 01:31:50,186] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-04-25 01:31:50,391] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-04-25 01:31:51,048] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-04-25 01:31:51,216] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-04-25 01:31:51,630] [pool-1-thread-12] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-04-25 01:31:52,470] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-04-25 01:31:54,145] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-04-25 01:31:56,923] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-04-25 01:31:57,221] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-04-25 01:31:57,304] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-04-25 01:31:57,542] [pool-1-thread-7] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-04-25 01:31:57,841] [pool-1-thread-11] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2024-04-25 01:31:58,341] [pool-1-thread-10] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-04-25 01:31:58,918] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-04-25 01:31:59,228] [pool-1-thread-6] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2024-04-25 01:31:59,451] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-04-25 01:31:59,889] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-04-25 01:32:02,440] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-04-25 01:32:04,061] [pool-1-thread-7] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-04-25 01:32:04,397] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-04-25 01:32:04,719] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-04-25 01:32:05,358] [pool-1-thread-4] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-04-25 01:32:31,774] [pool-1-thread-6] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-04-25 01:32:31,851] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-04-25 01:32:31,924] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-04-25 01:32:32,356] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-04-25 01:32:32,660] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-04-25 01:32:33,255] [pool-1-thread-6] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-04-25 01:32:33,572] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-04-25 01:32:33,975] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-04-25 01:32:34,053] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-04-25 01:32:34,303] [pool-1-thread-11] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-04-25 01:32:34,578] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-04-25 01:32:34,974] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-04-25 01:32:36,026] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2024-04-25 01:32:36,645] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-04-25 01:32:36,804] [pool-1-thread-6] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-04-25 01:32:36,905] [pool-1-thread-11] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-04-25 01:32:38,404] [pool-1-thread-7] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-04-25 01:32:38,479] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-04-25 01:32:39,177] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-04-25 01:32:39,793] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-04-25 01:32:41,532] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-04-25 01:32:41,621] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2024-04-25 01:32:41,814] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-04-25 01:32:42,368] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2024-04-25 01:32:42,868] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-04-25 01:32:42,952] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-04-25 01:32:43,668] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-04-25 01:32:43,848] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-04-25 01:32:43,939] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-04-25 01:32:45,129] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-04-25 01:32:45,569] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-04-25 01:32:46,058] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-04-25 01:32:46,312] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-04-25 01:32:46,382] [pool-1-thread-2] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-04-25 01:32:46,743] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-04-25 01:32:47,420] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-04-25 01:32:47,806] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-04-25 01:32:48,302] [pool-1-thread-11] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-04-25 01:35:30,507] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-04-25 01:35:30,849] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-04-25 01:35:31,622] [pool-1-thread-6] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-04-25 01:35:32,084] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-04-25 01:35:39,732] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-04-25 01:35:39,995] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-04-25 01:35:40,891] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-04-25 01:35:41,022] [pool-1-thread-3] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-04-25 01:35:41,705] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-04-25 01:35:48,759] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-04-25 01:35:56,389] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-04-25 01:35:56,903] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-04-25 01:35:57,451] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-04-25 01:35:58,367] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-04-25 01:35:58,842] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-04-25 01:35:59,504] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-04-25 01:36:00,857] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-04-25 01:36:00,976] [pool-1-thread-2] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-04-25 01:36:01,495] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-04-25 01:36:02,250] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-04-25 01:36:02,614] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-04-25 01:36:03,458] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-04-25 01:36:04,109] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-04-25 01:36:04,249] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-04-25 01:36:04,866] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2024-04-25 01:36:06,941] [pool-1-thread-4] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-04-25 01:36:07,037] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-04-25 01:36:07,512] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-04-25 01:36:09,930] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-04-25 01:36:10,503] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-04-25 01:36:11,067] [pool-1-thread-4] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-04-25 01:36:11,988] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-04-25 01:36:12,227] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-04-25 01:36:12,601] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-04-25 01:36:12,727] [pool-1-thread-4] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-04-25 01:36:13,846] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-04-25 01:36:13,976] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-04-25 01:36:14,040] [pool-1-thread-4] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-04-25 01:36:15,342] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2024-04-25 01:36:15,440] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-04-25 01:36:16,533] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-04-25 01:36:17,262] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-04-25 01:36:18,347] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-04-25 01:36:18,704] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-04-25 01:36:19,015] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-04-25 01:36:19,805] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-04-25 01:36:20,512] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2024-04-25 01:36:21,326] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-04-25 01:36:21,687] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-04-25 01:36:22,083] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-04-25 01:36:23,161] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 50 minutes 8 seconds
Finished: SUCCESS