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Started by upstream project "BIOFORMATS-test-repo" build number 5 originally caused by: Started by upstream project "Trigger" build number 6 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins3493250546747652452.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_638_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 00:20:15,927 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:20:15,929 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 00:20:15,929 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:15,931 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:15,931 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:20:15,931 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:20:15,932 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:20:15,932 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:15,932 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:15,932 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:20:15,933 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:20:15,933 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:20:16,228 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:20:16,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:20:16,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:20:16,265 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:20:16,277 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:20:16,277 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:20:16,277 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:20:16,278 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:20:16,278 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 00:20:16,279 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 00:20:16,279 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 347 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-18 00:20:16,291] [main] java.version = 1.8.0_342 [testng] 00:20:16,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:20:16,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:16,350 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-18_00-20-16.log] [testng] 00:20:16,353 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-03-18 00:20:16,355] [main] testng.directory = /data [testng] [2024-03-18 00:20:16,356] [main] testng.configDirectory = /config [testng] [2024-03-18 00:20:16,371] [main] testng.multiplier = 1.0 [testng] [2024-03-18 00:20:16,372] [main] testng.in-memory = false [testng] [2024-03-18 00:20:16,372] [main] testng.allow-missing = false [testng] [2024-03-18 00:20:16,372] [main] user.language = fr [testng] [2024-03-18 00:20:16,372] [main] user.country = FR [testng] [2024-03-18 00:20:16,372] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-03-18 00:20:39,528] [main] ---------------------------------------- [testng] [2024-03-18 00:20:39,529] [main] Total files: 4424 [testng] [2024-03-18 00:20:39,529] [main] Scan time: 23.156 s (5 ms/file) [testng] [2024-03-18 00:20:39,529] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-18 00:26:37,222] [pool-1-thread-1] Initializing /data/jae/Second image.tif: [testng] 00:26:37,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:26:37,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:37,224 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-18_00-26-37.log] [testng] 00:26:37,225 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c2246a2 - End of configuration. [testng] [2024-03-18 00:26:37,393] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 00:26:37,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:26:37,394 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:37,395 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-18_00-26-37.log] [testng] 00:26:37,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@268e8667 - End of configuration. [testng] [2024-03-18 00:26:37,605] [pool-1-thread-11] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] 00:26:37,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:26:37,605 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:37,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-18_00-26-37.log] [testng] 00:26:37,607 |-INFO in ch.qos.logback.core.sift.SiftProcessor@182f2cba - End of configuration. [testng] [2024-03-18 00:26:37,903] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] 00:26:37,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:26:37,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:37,905 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-18_00-26-37.log] [testng] 00:26:37,905 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cc8aa05 - End of configuration. [testng] [2024-03-18 00:26:38,089] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] 00:26:38,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:26:38,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:38,090 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-18_00-26-38.log] [testng] 00:26:38,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@283d78b0 - End of configuration. [testng] [2024-03-18 00:26:38,370] [pool-1-thread-8] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] 00:26:38,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:26:38,370 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:38,371 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-18_00-26-38.log] [testng] 00:26:38,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d27436e - End of configuration. [testng] [2024-03-18 00:26:38,528] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] 00:26:38,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:26:38,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:38,529 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-18_00-26-38.log] [testng] 00:26:38,529 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ea0a824 - End of configuration. [testng] [2024-03-18 00:26:38,689] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern2.tif: [testng] 00:26:38,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:26:38,689 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:38,690 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-18_00-26-38.log] [testng] 00:26:38,690 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62ffd3d5 - End of configuration. [testng] [2024-03-18 00:26:39,014] [pool-1-thread-5] Initializing /data/kevino/_BF_00005.tif: [testng] 00:26:39,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:26:39,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:39,016 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-18_00-26-39.log] [testng] 00:26:39,016 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74df435 - End of configuration. [testng] [2024-03-18 00:26:39,306] [pool-1-thread-4] Initializing /data/misc/9 h test.tif: [testng] 00:26:39,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:26:39,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:39,307 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-18_00-26-39.log] [testng] 00:26:39,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@215ae74f - End of configuration. [testng] [2024-03-18 00:26:39,504] [pool-1-thread-3] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] 00:26:39,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:26:39,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:39,505 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-18_00-26-39.log] [testng] 00:26:39,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49042b31 - End of configuration. [testng] [2024-03-18 00:26:39,643] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern9.tif: [testng] 00:26:39,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:26:39,644 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:39,644 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-18_00-26-39.log] [testng] 00:26:39,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a00d0 - End of configuration. [testng] [2024-03-18 00:26:42,101] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z014.tif: [testng] [2024-03-18 00:26:42,987] [pool-1-thread-8] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-03-18 00:26:43,126] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-03-18 00:26:43,288] [pool-1-thread-6] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-03-18 00:26:45,906] [pool-1-thread-9] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-03-18 00:26:46,067] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-03-18 00:26:46,205] [pool-1-thread-2] Initializing /data/stephane/d01&007.tif: [testng] [2024-03-18 00:26:46,423] [pool-1-thread-5] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-03-18 00:26:46,560] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-03-18 00:26:46,714] [pool-1-thread-11] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-03-18 00:26:48,094] [pool-1-thread-4] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-03-18 00:26:48,287] [pool-1-thread-12] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-03-18 00:26:48,920] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-03-18 00:26:49,222] [pool-1-thread-7] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-03-18 00:26:49,383] [pool-1-thread-11] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-03-18 00:26:49,540] [pool-1-thread-5] Initializing /data/jeff/test36b.tif: [testng] [2024-03-18 00:26:49,642] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-03-18 00:26:49,817] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z063.tif: [testng] [2024-03-18 00:26:50,016] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0226.TIF: [testng] [2024-03-18 00:26:50,229] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-03-18 00:26:52,321] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-03-18 00:26:52,772] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-03-18 00:26:52,936] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-03-18 00:26:53,269] [pool-1-thread-2] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-03-18 00:26:53,442] [pool-1-thread-10] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-03-18 00:26:53,637] [pool-1-thread-9] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-03-18 00:26:53,731] [pool-1-thread-5] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-03-18 00:26:53,863] [pool-1-thread-1] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-03-18 00:26:54,986] [pool-1-thread-4] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-03-18 00:26:55,269] [pool-1-thread-12] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-03-18 00:26:55,983] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-03-18 00:26:56,425] [pool-1-thread-7] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-03-18 00:26:56,613] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-03-18 00:26:56,739] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-03-18 00:26:56,865] [pool-1-thread-2] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-03-18 00:26:56,992] [pool-1-thread-1] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-03-18 00:26:58,382] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-03-18 00:26:58,615] [pool-1-thread-8] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-03-18 00:26:59,615] [pool-1-thread-9] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-03-18 00:27:00,378] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-03-18 00:27:00,549] [pool-1-thread-5] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-03-18 00:27:00,645] [pool-1-thread-2] Initializing /data/qa-5004/ID4118_21_uncuff_10x_HE.tif: [testng] [2024-03-18 00:27:00,835] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0209.TIF: [testng] [2024-03-18 00:27:00,971] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-03-18 00:27:03,540] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-03-18 00:27:03,709] [pool-1-thread-4] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-03-18 00:27:03,846] [pool-1-thread-8] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] 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00:30:31,381] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-03-18 00:30:31,535] [pool-1-thread-3] Initializing /data/damian/36m.tiff: [testng] [2024-03-18 00:30:31,950] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] [2024-03-18 00:30:32,357] [pool-1-thread-10] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-03-18 00:30:32,462] [pool-1-thread-2] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-03-18 00:30:32,589] [pool-1-thread-1] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-03-18 00:30:32,723] [pool-1-thread-7] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-03-18 00:30:32,794] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-03-18 00:30:32,957] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z022.tif: [testng] [2024-03-18 00:30:33,504] 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[pool-1-thread-5] Initializing /data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-03-18 00:30:36,550] [pool-1-thread-2] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-03-18 00:30:37,185] [pool-1-thread-3] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-03-18 00:30:38,086] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-03-18 00:30:38,320] [pool-1-thread-6] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-03-18 00:30:38,419] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-03-18 00:30:38,511] [pool-1-thread-9] Initializing /data/public/condensation/C4.pattern2.tif: [testng] [2024-03-18 00:30:38,771] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-03-18 00:30:39,785] [pool-1-thread-10] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-03-18 00:30:40,057] [pool-1-thread-7] Initializing 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Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-03-18 00:30:42,973] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [2024-03-18 00:30:43,289] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-03-18 00:30:43,877] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z028.tif: [testng] [2024-03-18 00:30:43,970] [pool-1-thread-8] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-03-18 00:30:44,023] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-03-18 00:30:44,611] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z035.tif: [testng] [2024-03-18 00:30:44,689] [pool-1-thread-5] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-03-18 00:30:44,754] [pool-1-thread-7] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-03-18 00:30:44,952] [pool-1-thread-12] Initializing 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[testng] [2024-03-18 00:30:48,783] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] [2024-03-18 00:30:50,121] [pool-1-thread-4] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-03-18 00:30:50,516] [pool-1-thread-8] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-03-18 00:30:50,687] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-03-18 00:30:50,848] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-03-18 00:30:50,918] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-03-18 00:30:50,961] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-03-18 00:30:51,232] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-03-18 00:30:51,273] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-03-18 00:30:51,370] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-03-18 00:30:51,470] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-03-18 00:30:52,512] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-03-18 00:30:53,058] [pool-1-thread-1] Initializing /data/josiah/cell-Z14.C1.tiff: [testng] [2024-03-18 00:30:53,229] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-03-18 00:30:53,366] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-03-18 00:30:53,441] [pool-1-thread-2] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-03-18 00:30:53,651] [pool-1-thread-8] Initializing /data/stephane/001_z01.tif: [testng] [2024-03-18 00:30:53,800] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-03-18 00:30:53,896] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-03-18 00:30:53,936] [pool-1-thread-5] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-03-18 00:30:54,761] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-03-18 00:30:54,858] [pool-1-thread-7] Initializing /data/qa-4833/cjw_tiffs/23273992_Figure 6_NA_NA_22159.TIF: [testng] [2024-03-18 00:30:56,028] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-03-18 00:30:56,133] [pool-1-thread-11] Initializing /data/tom-kazimiers/crop_two_chan.tiff: [testng] [2024-03-18 00:30:56,220] [pool-1-thread-1] Initializing /data/curtis/test1.tiff: [testng] [2024-03-18 00:30:56,360] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-03-18 00:30:56,429] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] [2024-03-18 00:30:56,661] [pool-1-thread-6] Initializing /data/alexa/test4.tif: [testng] [2024-03-18 00:30:56,845] [pool-1-thread-4] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina.tif: [testng] [2024-03-18 00:30:56,909] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z014.tif: [testng] [2024-03-18 00:30:57,190] [pool-1-thread-8] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] [2024-03-18 00:30:57,536] [pool-1-thread-3] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-03-18 00:30:58,282] [pool-1-thread-1] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-03-18 00:30:58,572] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-03-18 00:30:58,874] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-03-18 00:30:59,029] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-03-18 00:30:59,582] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z004.tif: [testng] [2024-03-18 00:31:00,434] [pool-1-thread-7] Initializing /data/misc/mri.avi: [testng] [2024-03-18 00:31:00,520] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-03-18 00:31:00,670] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-03-18 00:31:01,043] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-03-18 00:31:01,324] [pool-1-thread-11] Initializing /data/josiah/cell-Z1.C1.tiff: [testng] [2024-03-18 00:31:01,791] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-03-18 00:31:02,146] [pool-1-thread-6] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-03-18 00:31:02,269] [pool-1-thread-10] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-03-18 00:31:02,399] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-03-18 00:31:02,449] [pool-1-thread-1] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-03-18 00:31:02,648] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-03-18 00:31:02,998] [pool-1-thread-4] Initializing /data/public/libtiff/jim___dg.tif: [testng] [2024-03-18 00:31:03,138] [pool-1-thread-2] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-03-18 00:31:03,753] [pool-1-thread-7] Initializing /data/johan/Test1_12.tif: [testng] [2024-03-18 00:31:03,982] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-03-18 00:31:04,145] [pool-1-thread-3] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-03-18 00:31:04,236] [pool-1-thread-12] Initializing /data/paulh/quickpollen4_w1_t1.tif: [testng] [2024-03-18 00:31:04,679] [pool-1-thread-1] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-03-18 00:31:04,728] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-03-18 00:31:04,787] [pool-1-thread-9] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-03-18 00:31:05,648] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-03-18 00:31:06,306] [pool-1-thread-4] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-03-18 00:31:06,417] [pool-1-thread-2] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] [2024-03-18 00:31:06,995] [pool-1-thread-10] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-03-18 00:31:07,084] [pool-1-thread-6] Initializing /data/curtis/test2.tiff: [testng] [2024-03-18 00:31:07,138] [pool-1-thread-1] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-03-18 00:31:07,343] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-03-18 00:31:07,430] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-03-18 00:31:07,480] [pool-1-thread-11] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-03-18 00:31:10,484] [pool-1-thread-5] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-03-18 00:31:10,761] [pool-1-thread-4] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-03-18 00:31:10,857] [pool-1-thread-2] Initializing /data/ascb/FND-26a_PaladeGlycogenLabeled_4800.tif: [testng] [2024-03-18 00:31:13,506] [pool-1-thread-6] Initializing /data/boguslaw/Rab582 3d det gfapBrdUmib1z24Live9-14-2007_11-55-58_AM copy.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 11 minutes 31 seconds Finished: SUCCESS