![[Jenkins]](/jenkins/static/97c0ac26/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 45 originally caused by: Started by upstream project "Trigger" build number 52 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins9965133586231430054.sh + '[' psd = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_6502_merge_ci -v /uod/idr/repos/curated/psd:/data -v /uod/idr-scratch/merge-ci/curated/psd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:34:00,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:34:00,385 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:34:00,385 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:34:00,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:34:00,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:34:00,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:34:00,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:34:00,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:34:00,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:34:00,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:34:00,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:34:00,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:34:00,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:34:00,820 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:34:00,821 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:34:00,821 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:34:00,822 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:34:00,822 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 02:34:00,823 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 02:34:00,823 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 437 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-26 02:34:00,836] [main] java.version = 1.8.0_342 [testng] 02:34:00,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:34:00,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:00,896 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-26_02-34-00.log] [testng] 02:34:00,899 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-26 02:34:00,902] [main] testng.directory = /data [testng] [2024-04-26 02:34:00,902] [main] testng.configDirectory = /config [testng] [2024-04-26 02:34:00,919] [main] testng.multiplier = 1.0 [testng] [2024-04-26 02:34:00,920] [main] testng.in-memory = false [testng] [2024-04-26 02:34:00,920] [main] testng.allow-missing = false [testng] [2024-04-26 02:34:00,920] [main] user.language = en [testng] [2024-04-26 02:34:00,920] [main] user.country = ${user.country} [testng] [2024-04-26 02:34:00,920] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-26 02:34:01,535] [main] ---------------------------------------- [testng] [2024-04-26 02:34:01,535] [main] Total files: 18 [testng] [2024-04-26 02:34:01,536] [main] Scan time: 0.615 s (34 ms/file) [testng] [2024-04-26 02:34:01,536] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-26 02:34:03,368] [pool-1-thread-1] Initializing /data/big-images/8kx8k.psd: [testng] 02:34:03,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:34:03,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-26_02-34-03.log] [testng] 02:34:03,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b9c8974 - End of configuration. [testng] [2024-04-26 02:34:03,429] [pool-1-thread-12] Initializing /data/jcb/Fig5A_siHP16h.tif: [testng] 02:34:03,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:34:03,429 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,430 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-26_02-34-03.log] [testng] 02:34:03,444 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e626b12 - End of configuration. [testng] [2024-04-26 02:34:03,490] [pool-1-thread-11] Initializing /data/jcb/Fig5A_sip1506h.tif: [testng] 02:34:03,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:34:03,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-26_02-34-03.log] [testng] 02:34:03,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c215ec6 - End of configuration. [testng] [2024-04-26 02:34:03,527] [pool-1-thread-10] Initializing /data/qa-7632/23283078__NA_NA_27343.psd: [testng] 02:34:03,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:34:03,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,528 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-26_02-34-03.log] [testng] 02:34:03,528 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b6d59d2 - End of configuration. [testng] [2024-04-26 02:34:03,570] [pool-1-thread-9] Initializing /data/qa-4497/22421435_Supl Fig 4_C_Flag_12987.psd: [testng] 02:34:03,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:34:03,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-26_02-34-03.log] [testng] 02:34:03,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@488ed52f - End of configuration. [testng] [2024-04-26 02:34:03,589] [pool-1-thread-8] Initializing /data/qa-4117/caspase gel-1.psd: [testng] 02:34:03,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:34:03,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,763 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-26_02-34-03.log] [testng] 02:34:03,764 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51e62e1e - End of configuration. [testng] [2024-04-26 02:34:03,840] [pool-1-thread-7] Initializing /data/misc/glossy_buttons.psd: [testng] 02:34:03,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:34:03,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,841 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-26_02-34-03.log] [testng] 02:34:03,842 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16161854 - End of configuration. [testng] [2024-04-26 02:34:03,878] [pool-1-thread-6] Initializing /data/misc/vig_drawing_1.psd: [testng] 02:34:03,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:34:03,878 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,880 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-26_02-34-03.log] [testng] 02:34:03,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d44177e - End of configuration. [testng] [2024-04-26 02:34:03,919] [pool-1-thread-5] Initializing /data/cris/house.tif: [testng] 02:34:03,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:34:03,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-26_02-34-03.log] [testng] 02:34:03,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ab948cb - End of configuration. [testng] [2024-04-26 02:34:03,985] [pool-1-thread-4] Initializing /data/misc/smilie.psd: [testng] 02:34:03,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:34:03,986 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:03,988 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-26_02-34-03.log] [testng] 02:34:03,989 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3042cb6c - End of configuration. [testng] [2024-04-26 02:34:04,022] [pool-1-thread-3] Initializing /data/ascb/607x.psd: [testng] 02:34:04,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:34:04,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:04,026 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-26_02-34-04.log] [testng] 02:34:04,027 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a9a7e02 - End of configuration. [testng] [2024-04-26 02:34:04,164] [pool-1-thread-2] Initializing /data/misc/venus_composite.psd: [testng] 02:34:04,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:34:04,165 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:34:04,166 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-26_02-34-04.log] [testng] 02:34:04,167 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e67ad5d - End of configuration. [testng] [2024-04-26 02:34:07,290] [pool-1-thread-5] Initializing /data/ascb/thin&thick fill.2.psd: [testng] [2024-04-26 02:34:07,317] [pool-1-thread-9] Initializing /data/misc/glossy_orbs.psd: [testng] [2024-04-26 02:34:07,335] [pool-1-thread-7] Initializing /data/jcb/Fig5A_sicont6h.tif: [testng] [2024-04-26 02:34:07,360] [pool-1-thread-4] Initializing /data/ascb/423.psd: [testng] [2024-04-26 02:34:07,647] [pool-1-thread-2] Initializing /data/simon/colour_separated_image.psd: [testng] [2024-04-26 02:34:07,964] [pool-1-thread-6] Initializing /data/misc/venus_composite_8bit.psd: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 33 seconds Finished: SUCCESS