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Started by upstream project "BIOFORMATS-test-repo" build number 46 originally caused by: Started by upstream project "Trigger" build number 53 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins1566246068647509488.sh + '[' ome-xml = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_6669_merge_ci -v /uod/idr/repos/curated/ome-xml:/data -v /uod/idr-scratch/merge-ci/curated/ome-xml:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:28:57,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:28:57,989 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 02:28:57,989 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:28:57,990 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:28:57,991 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:28:57,991 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:28:57,992 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:28:57,992 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:28:57,992 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:28:57,993 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:28:57,993 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:28:57,994 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:28:58,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:28:58,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:28:58,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:28:58,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:28:58,217 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:28:58,217 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:28:58,217 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:28:58,217 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:28:58,217 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 02:28:58,218 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 02:28:58,218 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 226 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-27 02:28:58,228] [main] java.version = 11.0.16 [testng] 02:28:58,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:28:58,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:28:58,274 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-27_02-28-58.log] [testng] 02:28:58,276 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-04-27 02:28:58,278] [main] testng.directory = /data [testng] [2024-04-27 02:28:58,278] [main] testng.configDirectory = /config [testng] [2024-04-27 02:28:58,288] [main] testng.multiplier = 1.0 [testng] [2024-04-27 02:28:58,289] [main] testng.in-memory = false [testng] [2024-04-27 02:28:58,290] [main] testng.allow-missing = false [testng] [2024-04-27 02:28:58,290] [main] user.language = en [testng] [2024-04-27 02:28:58,290] [main] user.country = ${user.country} [testng] [2024-04-27 02:28:58,290] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-27 02:28:59,692] [main] ---------------------------------------- [testng] [2024-04-27 02:28:59,692] [main] Total files: 203 [testng] [2024-04-27 02:28:59,692] [main] Scan time: 1.402 s (6 ms/file) [testng] [2024-04-27 02:28:59,692] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 202 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-27 02:29:26,827] [pool-1-thread-1] Initializing /data/public/2010-06/z-series-time-series.ome.xml: [testng] 02:29:26,827 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:29:26,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:26,830 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-27_02-29-26.log] [testng] 02:29:26,830 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72cf07bf - End of configuration. [testng] [2024-04-27 02:29:26,862] [pool-1-thread-12] Initializing /data/public/2010-04/z-series.ome.xml: [testng] 02:29:26,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:29:26,862 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:26,863 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-27_02-29-26.log] [testng] 02:29:26,863 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ea1f6af - End of configuration. [testng] [2024-04-27 02:29:26,980] [pool-1-thread-11] Initializing /data/public/2013-06/z-series-time-series.ome.xml: [testng] 02:29:26,980 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:29:26,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:26,981 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-27_02-29-26.log] [testng] 02:29:26,982 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72d14821 - End of configuration. [testng] [2024-04-27 02:29:27,004] [pool-1-thread-10] Initializing /data/public/2010-06/spim.ome.xml: [testng] 02:29:27,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:29:27,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,004 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-27_02-29-27.log] [testng] 02:29:27,005 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6360907 - End of configuration. [testng] [2024-04-27 02:29:27,080] [pool-1-thread-9] Initializing /data/public/2016-06/hcs.ome.xml: [testng] 02:29:27,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:29:27,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-27_02-29-27.log] [testng] 02:29:27,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a54f88b - End of configuration. [testng] [2024-04-27 02:29:27,097] [pool-1-thread-8] Initializing /data/public/2016-06/tagannotation.ome.xml: [testng] 02:29:27,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:29:27,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-27_02-29-27.log] [testng] 02:29:27,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@235308dd - End of configuration. [testng] [2024-04-27 02:29:27,108] [pool-1-thread-7] Initializing /data/public/2009-09/metadata-only.ome.xml: [testng] 02:29:27,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:29:27,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-27_02-29-27.log] [testng] 02:29:27,109 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1200e1 - End of configuration. [testng] [2024-04-27 02:29:27,128] [pool-1-thread-6] Initializing /data/public/2013-06/z-series.ome.xml: [testng] 02:29:27,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:29:27,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,129 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-27_02-29-27.log] [testng] 02:29:27,129 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a670141 - End of configuration. [testng] [2024-04-27 02:29:27,143] [pool-1-thread-5] Initializing /data/public/2011-06/transformations-upgrade.ome.xml: [testng] 02:29:27,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:29:27,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-27_02-29-27.log] [testng] 02:29:27,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a7ee385 - End of configuration. [testng] [2024-04-27 02:29:27,192] [pool-1-thread-4] Initializing /data/public/2015-01/transformations-upgrade.ome.xml: [testng] 02:29:27,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:29:27,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-27_02-29-27.log] [testng] 02:29:27,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59c6aa1b - End of configuration. [testng] [2024-04-27 02:29:27,250] [pool-1-thread-3] Initializing /data/public/2012-06/filter.ome.xml: [testng] 02:29:27,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:29:27,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,251 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-27_02-29-27.log] [testng] 02:29:27,251 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bfe4f6a - End of configuration. [testng] [2024-04-27 02:29:27,269] [pool-1-thread-2] Initializing /data/public/2013-06/transformations-downgrade.ome.xml: [testng] 02:29:27,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:29:27,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:27,270 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-27_02-29-27.log] [testng] 02:29:27,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2afe6429 - End of configuration. [testng] [2024-04-27 02:29:28,992] [pool-1-thread-8] Initializing /data/public/2013-06/timestampannotation.ome.xml: [testng] [2024-04-27 02:29:29,029] [pool-1-thread-6] Initializing /data/public/2016-06/metadata-only.ome.xml: [testng] [2024-04-27 02:29:29,039] [pool-1-thread-7] Initializing /data/public/2015-01/timestampannotation-posix-only.ome.xml: [testng] [2024-04-27 02:29:29,072] [pool-1-thread-1] Initializing /data/public/2016-06/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:29,085] [pool-1-thread-3] Initializing /data/public/2013-06/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:29,103] [pool-1-thread-11] Initializing /data/public/2010-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:29,139] [pool-1-thread-12] Initializing /data/public/2015-01/multi-channel.ome.xml: [testng] [2024-04-27 02:29:29,151] [pool-1-thread-2] Initializing /data/public/2012-06/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:29,170] [pool-1-thread-4] Initializing /data/public/2010-04/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:29,209] [pool-1-thread-5] Initializing /data/public/2016-06/no-date.ome.xml: [testng] [2024-04-27 02:29:29,375] [pool-1-thread-10] Initializing /data/public/2009-09/instrument.ome.xml: [testng] [2024-04-27 02:29:29,401] [pool-1-thread-9] Initializing /data/public/2011-06/instrument.ome.xml: [testng] [2024-04-27 02:29:29,608] [pool-1-thread-6] Initializing /data/public/2011-06/filter.ome.xml: [testng] [2024-04-27 02:29:29,647] [pool-1-thread-5] Initializing /data/public/2010-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:29,727] [pool-1-thread-1] Initializing /data/public/2016-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:29,785] [pool-1-thread-2] Initializing /data/samples/Sample-2003-custom-ST.ome: [testng] [2024-04-27 02:29:29,931] [pool-1-thread-3] Initializing /data/curtis/min-sample-2008-02.ome: [testng] [2024-04-27 02:29:29,961] [pool-1-thread-12] Initializing /data/public/2008-09/multi-pixel-default.ome.xml: [testng] [2024-04-27 02:29:30,056] [pool-1-thread-7] Initializing /data/public/2008-09/dataset-group-project.ome.xml: [testng] [2024-04-27 02:29:30,173] [pool-1-thread-10] Initializing /data/public/2010-06/ROI.ome.xml: [testng] [2024-04-27 02:29:30,207] [pool-1-thread-11] Initializing /data/public/2015-01/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:30,250] [pool-1-thread-8] Initializing /data/public/2010-06/z-series.ome.xml: [testng] [2024-04-27 02:29:30,271] [pool-1-thread-4] Initializing /data/public/2010-06/xmlannotation-svg.ome.xml: [testng] [2024-04-27 02:29:30,287] [pool-1-thread-9] Initializing /data/samples/Sample-2007_06.ome: [testng] [2024-04-27 02:29:30,535] [pool-1-thread-6] Initializing /data/public/2012-06/multi-channel.ome.xml: [testng] [2024-04-27 02:29:30,572] [pool-1-thread-12] Initializing /data/public/2011-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:30,693] [pool-1-thread-3] Initializing /data/public/2013-06/tagannotation.ome.xml: [testng] [2024-04-27 02:29:30,761] [pool-1-thread-7] Initializing /data/public/2008-09/multi-channel.ome.xml: [testng] [2024-04-27 02:29:30,809] [pool-1-thread-5] Initializing /data/public/2012-06/ROI.ome.xml: [testng] [2024-04-27 02:29:30,875] [pool-1-thread-1] Initializing /data/public/2012-06/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:30,922] [pool-1-thread-8] Initializing /data/public/2015-01/tagannotation.ome.xml: [testng] [2024-04-27 02:29:30,935] [pool-1-thread-10] Initializing /data/public/2010-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:31,023] [pool-1-thread-4] Initializing /data/public/2010-06/single-image.ome.xml: [testng] [2024-04-27 02:29:31,068] [pool-1-thread-6] Initializing /data/public/2009-09/single-image.ome.xml: [testng] [2024-04-27 02:29:31,100] [pool-1-thread-11] Initializing /data/public/2015-01/instrument.ome.xml: [testng] [2024-04-27 02:29:31,117] [pool-1-thread-2] Initializing /data/public/2016-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:31,284] [pool-1-thread-3] Initializing /data/public/2010-04/multi-channel.ome.xml: [testng] [2024-04-27 02:29:31,325] [pool-1-thread-1] Initializing /data/samples/TAABA.ome: [testng] [2024-04-27 02:29:31,901] [pool-1-thread-5] Initializing /data/public/2008-09/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:31,928] [pool-1-thread-9] Initializing /data/public/2010-06/no-date.ome.xml: [testng] [2024-04-27 02:29:31,949] [pool-1-thread-7] Initializing /data/public/2009-09/z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:32,115] [pool-1-thread-12] Initializing /data/samples/test.OME: [testng] [2024-04-27 02:29:32,130] [pool-1-thread-4] Initializing /data/public/2009-09/time-series.ome.xml: [testng] [2024-04-27 02:29:32,163] [pool-1-thread-11] Initializing /data/public/2012-06/xmlannotation-svg.ome.xml: [testng] [2024-04-27 02:29:32,182] [pool-1-thread-8] Initializing /data/public/2008-09/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:32,224] [pool-1-thread-6] Initializing /data/curtis/black0.ome: [testng] [2024-04-27 02:29:32,552] [pool-1-thread-2] Initializing /data/public/2010-06/time-series.ome.xml: [testng] [2024-04-27 02:29:32,653] [pool-1-thread-9] Initializing /data/public/2016-06/minimum-specification.ome.xml: [testng] [2024-04-27 02:29:32,723] [pool-1-thread-3] Initializing /data/public/2012-06/single-image.ome.xml: [testng] [2024-04-27 02:29:32,736] [pool-1-thread-10] Initializing /data/public/2016-06/ROI.ome.xml: [testng] [2024-04-27 02:29:32,746] [pool-1-thread-5] Initializing /data/public/2013-06/metadata-only.ome.xml: [testng] [2024-04-27 02:29:32,757] [pool-1-thread-7] Initializing /data/public/2011-06/z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:32,835] [pool-1-thread-4] Initializing /data/public/2013-06/spim.ome.xml: [testng] [2024-04-27 02:29:32,884] [pool-1-thread-12] Initializing /data/public/2010-06/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:32,954] [pool-1-thread-2] Initializing /data/public/2016-06/xmlannotation-multi-value.ome.xml: [testng] [2024-04-27 02:29:32,971] [pool-1-thread-8] Initializing /data/samples/Antarctic_Diatom_D3D_01.ome: [testng] [2024-04-27 02:29:33,517] [pool-1-thread-11] Initializing /data/public/2015-01/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:33,553] [pool-1-thread-9] Initializing /data/public/2009-09/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:33,729] [pool-1-thread-5] Initializing /data/public/2015-01/instrument-units-default.ome.xml: [testng] [2024-04-27 02:29:33,756] [pool-1-thread-3] Initializing /data/public/2011-06/no-date.ome.xml: [testng] [2024-04-27 02:29:33,769] [pool-1-thread-7] Initializing /data/public/2016-06/instrument-units-default.ome.xml: [testng] [2024-04-27 02:29:33,788] [pool-1-thread-10] Initializing /data/public/2016-06/multi-channel.ome.xml: [testng] [2024-04-27 02:29:33,813] [pool-1-thread-12] Initializing /data/curtis/black6-7.tif: [testng] [2024-04-27 02:29:34,167] [pool-1-thread-2] Initializing /data/public/2010-04/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:34,364] [pool-1-thread-11] Initializing /data/johannes/20100625_W3_Ppac_8.ome: [testng] [2024-04-27 02:29:34,530] [pool-1-thread-3] Initializing /data/public/2016-06/z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:34,630] [pool-1-thread-7] Initializing /data/public/2008-09/time-series.ome.xml: [testng] [2024-04-27 02:29:34,661] [pool-1-thread-5] Initializing /data/public/2016-06/timestampannotation.ome.xml: [testng] [2024-04-27 02:29:34,692] [pool-1-thread-10] Initializing /data/public/2010-06/filter.ome.xml: [testng] [2024-04-27 02:29:34,707] [pool-1-thread-4] Initializing /data/public/2015-01/instrument-units-alternate.ome.xml: [testng] [2024-04-27 02:29:35,005] [pool-1-thread-10] Initializing /data/public/2011-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:35,033] [pool-1-thread-3] Initializing /data/public/2013-06/multi-channel.ome.xml: [testng] [2024-04-27 02:29:35,072] [pool-1-thread-6] Initializing /data/public/2015-01/timestampannotation.ome.xml: [testng] [2024-04-27 02:29:35,123] [pool-1-thread-4] Initializing /data/public/2013-06/filter.ome.xml: [testng] [2024-04-27 02:29:35,137] [pool-1-thread-7] Initializing /data/public/2012-06/z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:35,207] [pool-1-thread-5] Initializing /data/sandeep/synth_rbc.ome: [testng] [2024-04-27 02:29:35,453] [pool-1-thread-9] Initializing /data/public/2015-01/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:35,495] [pool-1-thread-2] Initializing /data/public/2013-06/instrument.ome.xml: [testng] [2024-04-27 02:29:35,631] [pool-1-thread-12] Initializing /data/public/2016-06/instrument-units-alternate.ome.xml: [testng] [2024-04-27 02:29:35,659] [pool-1-thread-3] Initializing /data/public/2010-04/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:35,718] [pool-1-thread-4] Initializing /data/public/2016-06/xmlannotation-svg.ome.xml: [testng] [2024-04-27 02:29:35,735] [pool-1-thread-10] Initializing /data/public/2012-06/z-series.ome.xml: [testng] [2024-04-27 02:29:35,827] [pool-1-thread-7] Initializing /data/public/2012-06/time-series.ome.xml: [testng] [2024-04-27 02:29:35,854] [pool-1-thread-2] Initializing /data/public/2009-09/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:35,907] [pool-1-thread-11] Initializing /data/public/2013-06/no-date.ome.xml: [testng] [2024-04-27 02:29:35,937] [pool-1-thread-6] Initializing /data/public/2013-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:35,974] [pool-1-thread-12] Initializing /data/public/2011-06/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:35,992] [pool-1-thread-9] Initializing /data/public/2010-04/ROI.ome.xml: [testng] [2024-04-27 02:29:36,049] [pool-1-thread-4] Initializing /data/public/2010-04/z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:36,096] [pool-1-thread-3] Initializing /data/public/2015-01/no-date.ome.xml: [testng] [2024-04-27 02:29:36,145] [pool-1-thread-7] Initializing /data/public/2016-06/transformations-downgrade.ome.xml: [testng] [2024-04-27 02:29:36,181] [pool-1-thread-10] Initializing /data/public/2012-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:36,245] [pool-1-thread-2] Initializing /data/public/2015-01/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:36,259] [pool-1-thread-11] Initializing /data/mario/Hoechst_ND - n000000.ome: [testng] [2024-04-27 02:29:36,467] [pool-1-thread-1] Initializing /data/public/2015-01/mapannotation.ome.xml: [testng] [2024-04-27 02:29:36,542] [pool-1-thread-3] Initializing /data/public/2015-01/z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:36,579] [pool-1-thread-9] Initializing /data/public/2015-01/metadata-only.ome.xml: [testng] [2024-04-27 02:29:36,592] [pool-1-thread-12] Initializing /data/curtis/black6-7.ome: [testng] [2024-04-27 02:29:36,833] [pool-1-thread-6] Initializing /data/public/2010-04/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:36,850] [pool-1-thread-4] Initializing /data/public/2013-06/xmlannotation-multi-value.ome.xml: [testng] [2024-04-27 02:29:36,971] [pool-1-thread-2] Initializing /data/public/2016-06/time-series.ome.xml: [testng] [2024-04-27 02:29:36,982] [pool-1-thread-1] Initializing /data/public/2010-04/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:37,075] [pool-1-thread-7] Initializing /data/public/2011-06/spim.ome.xml: [testng] [2024-04-27 02:29:37,138] [pool-1-thread-10] Initializing /data/public/2015-01/single-image.ome.xml: [testng] [2024-04-27 02:29:37,197] [pool-1-thread-3] Initializing /data/public/2012-06/no-date.ome.xml: [testng] [2024-04-27 02:29:37,227] [pool-1-thread-9] Initializing /data/public/2009-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:37,289] [pool-1-thread-6] Initializing /data/samples/testImportPlateMultiplePlateAcquisitions1508.ome: [testng] [2024-04-27 02:29:37,492] [pool-1-thread-4] Initializing /data/public/2012-06/metadata-only.ome.xml: [testng] [2024-04-27 02:29:37,506] [pool-1-thread-5] Initializing /data/public/2010-04/filter.ome.xml: [testng] [2024-04-27 02:29:37,543] [pool-1-thread-2] Initializing /data/public/2016-06/folders-larger-taxonomy.ome.xml: [testng] [2024-04-27 02:29:37,723] [pool-1-thread-10] Initializing /data/public/2012-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:37,786] [pool-1-thread-3] Initializing /data/public/2011-06/ROI.ome.xml: [testng] [2024-04-27 02:29:37,907] [pool-1-thread-7] Initializing /data/public/2016-06/commentannotation.ome.xml: [testng] [2024-04-27 02:29:37,918] [pool-1-thread-1] Initializing /data/public/2010-04/metadata-only.ome.xml: [testng] [2024-04-27 02:29:37,931] [pool-1-thread-4] Initializing /data/public/2010-06/multi-channel.ome.xml: [testng] [2024-04-27 02:29:37,955] [pool-1-thread-5] Initializing /data/public/2010-04/instrument.ome.xml: [testng] [2024-04-27 02:29:38,011] [pool-1-thread-9] Initializing /data/public/2016-06/timestampannotation-posix-only.ome.xml: [testng] [2024-04-27 02:29:38,064] [pool-1-thread-8] Initializing /data/public/2011-06/metadata-only.ome.xml: [testng] [2024-04-27 02:29:38,147] [pool-1-thread-3] Initializing /data/public/2015-01/hcs.ome.xml: [testng] [2024-04-27 02:29:38,165] [pool-1-thread-7] Initializing /data/public/2016-06/z-series.ome.xml: [testng] [2024-04-27 02:29:38,193] [pool-1-thread-1] Initializing /data/public/2013-06/transformations-upgrade.ome.xml: [testng] [2024-04-27 02:29:38,246] [pool-1-thread-4] Initializing /data/public/2016-06/single-image.ome.xml: [testng] [2024-04-27 02:29:38,372] [pool-1-thread-8] Initializing /data/public/2013-06/time-series.ome.xml: [testng] [2024-04-27 02:29:38,401] [pool-1-thread-5] Initializing /data/samples/Sample-2003_FC.ome: [testng] [2024-04-27 02:29:38,481] [pool-1-thread-7] Initializing /data/public/2011-06/single-image.ome.xml: [testng] [2024-04-27 02:29:38,531] [pool-1-thread-9] Initializing /data/public/2012-06/tagannotation.ome.xml: [testng] [2024-04-27 02:29:38,595] [pool-1-thread-10] Initializing /data/public/2009-09/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:38,650] [pool-1-thread-4] Initializing /data/public/2011-06/multi-channel.ome.xml: [testng] [2024-04-27 02:29:38,666] [pool-1-thread-2] Initializing /data/public/2008-09/instrument.ome.xml: [testng] [2024-04-27 02:29:38,788] [pool-1-thread-8] Initializing /data/curtis/black0.tif: [testng] [2024-04-27 02:29:39,074] [pool-1-thread-12] Initializing /data/public/2011-06/time-series.ome.xml: [testng] [2024-04-27 02:29:39,091] [pool-1-thread-1] Initializing /data/public/2008-09/z-series.ome.xml: [testng] [2024-04-27 02:29:39,121] [pool-1-thread-7] Initializing /data/public/2013-06/xmlannotation-svg.ome.xml: [testng] [2024-04-27 02:29:39,150] [pool-1-thread-9] Initializing /data/public/2016-06/xmlannotation-body-space.ome.xml: [testng] [2024-04-27 02:29:39,175] [pool-1-thread-3] Initializing /data/curtis/all-black.tif: [testng] [2024-04-27 02:29:39,319] [pool-1-thread-6] Initializing /data/public/2010-06/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:39,339] [pool-1-thread-4] Initializing /data/public/2012-06/instrument.ome.xml: [testng] [2024-04-27 02:29:39,367] [pool-1-thread-2] Initializing /data/public/2012-06/transformations-upgrade.ome.xml: [testng] [2024-04-27 02:29:39,419] [pool-1-thread-5] Initializing /data/public/2013-06/multi-channel-time-series.ome.xml: [testng] [2024-04-27 02:29:39,484] [pool-1-thread-10] Initializing /data/public/2013-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:39,603] [pool-1-thread-7] Initializing /data/public/2010-04/single-image.ome.xml: [testng] [2024-04-27 02:29:39,633] [pool-1-thread-9] Initializing /data/public/2015-01/minimum-specification.ome.xml: [testng] [2024-04-27 02:29:39,654] [pool-1-thread-12] Initializing /data/public/2015-01/spim.ome.xml: [testng] [2024-04-27 02:29:39,780] [pool-1-thread-1] Initializing /data/public/2013-06/single-image.ome.xml: [testng] [2024-04-27 02:29:39,847] [pool-1-thread-6] Initializing /data/public/2011-06/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:39,939] [pool-1-thread-4] Initializing /data/public/2012-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:40,005] [pool-1-thread-5] Initializing /data/samples/sdub.ome: [testng] [2024-04-27 02:29:40,264] [pool-1-thread-2] Initializing /data/public/2015-01/commentannotation.ome.xml: [testng] [2024-04-27 02:29:40,295] [pool-1-thread-11] Initializing /data/public/2016-06/spim.ome.xml: [testng] [2024-04-27 02:29:40,384] [pool-1-thread-8] Initializing /data/public/2013-06/commentannotation.ome.xml: [testng] [2024-04-27 02:29:40,433] [pool-1-thread-1] Initializing /data/public/2013-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:40,490] [pool-1-thread-3] Initializing /data/public/2016-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:40,517] [pool-1-thread-9] Initializing /data/public/2016-06/instrument.ome.xml: [testng] [2024-04-27 02:29:40,534] [pool-1-thread-6] Initializing /data/public/2009-09/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:40,552] [pool-1-thread-7] Initializing /data/public/2011-06/z-series.ome.xml: [testng] [2024-04-27 02:29:40,665] [pool-1-thread-2] Initializing /data/samples/Sample-2008_02.ome: [testng] [2024-04-27 02:29:40,739] [pool-1-thread-8] Initializing /data/public/2013-06/xmlannotation-body-space.ome.xml: [testng] [2024-04-27 02:29:40,784] [pool-1-thread-12] Initializing /data/mario/Hoechst_ND - n000000.tif: [testng] [2024-04-27 02:29:40,856] [pool-1-thread-10] Initializing /data/public/2013-06/ROI.ome.xml: [testng] [2024-04-27 02:29:40,963] [pool-1-thread-9] Initializing /data/public/2015-01/time-series.ome.xml: [testng] [2024-04-27 02:29:40,974] [pool-1-thread-11] Initializing /data/public/2009-09/multi-channel.ome.xml: [testng] [2024-04-27 02:29:40,989] [pool-1-thread-7] Initializing /data/public/2008-09/multi-pixel-aquired.ome.xml: [testng] [2024-04-27 02:29:41,005] [pool-1-thread-4] Initializing /data/curtis/all-black.ome: [testng] [2024-04-27 02:29:41,023] [pool-1-thread-6] Initializing /data/public/2010-04/time-series.ome.xml: [testng] [2024-04-27 02:29:41,040] [pool-1-thread-8] Initializing /data/public/2016-06/mapannotation.ome.xml: [testng] [2024-04-27 02:29:41,048] [pool-1-thread-3] Initializing /data/public/2015-01/xmlannotation-body-space.ome.xml: [testng] [2024-04-27 02:29:41,060] [pool-1-thread-1] Initializing /data/melissa/large-xml-test.ome: [testng] [2024-04-27 02:29:52,273] [pool-1-thread-10] Initializing /data/public/2009-09/ROI.ome.xml: [testng] [2024-04-27 02:29:52,347] [pool-1-thread-8] Initializing /data/public/2012-06/spim.ome.xml: [testng] [2024-04-27 02:29:52,452] [pool-1-thread-9] Initializing /data/public/2008-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:52,500] [pool-1-thread-6] Initializing /data/public/2016-06/multi-channel-z-series.ome.xml: [testng] [2024-04-27 02:29:52,514] [pool-1-thread-3] Initializing /data/public/2008-09/single-image.ome.xml: [testng] [2024-04-27 02:29:52,535] [pool-1-thread-11] Initializing /data/public/2012-06/transformations-downgrade.ome.xml: [testng] [2024-04-27 02:29:52,568] [pool-1-thread-7] Initializing /data/public/2010-06/metadata-only.ome.xml: [testng] [2024-04-27 02:29:52,594] [pool-1-thread-4] Initializing /data/public/2015-01/z-series.ome.xml: [testng] [2024-04-27 02:29:52,609] [pool-1-thread-2] Initializing /data/public/2015-01/xmlannotation-svg.ome.xml: [testng] [2024-04-27 02:29:52,625] [pool-1-thread-5] Initializing /data/public/2016-06/filter.ome.xml: [testng] [2024-04-27 02:29:52,733] [pool-1-thread-10] Initializing /data/public/2010-06/instrument.ome.xml: [testng] [2024-04-27 02:29:52,796] [pool-1-thread-7] Initializing /data/public/2015-01/ROI.ome.xml: [testng] [2024-04-27 02:29:52,847] [pool-1-thread-6] Initializing /data/public/2016-06/transformations-upgrade.ome.xml: [testng] [2024-04-27 02:29:52,874] [pool-1-thread-4] Initializing /data/public/2011-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-04-27 02:29:52,906] [pool-1-thread-5] Initializing /data/public/2016-06/folders-simple-taxonomy.ome.xml: [testng] [2024-04-27 02:29:52,972] [pool-1-thread-3] Initializing /data/public/2013-06/timestampannotation-posix-only.ome.xml: [testng] [2024-04-27 02:29:53,021] [pool-1-thread-9] Initializing /data/public/2015-01/filter.ome.xml: [testng] [2024-04-27 02:29:53,038] [pool-1-thread-11] Initializing /data/public/2015-01/xmlannotation-multi-value.ome.xml: [testng] [2024-04-27 02:29:53,085] [pool-1-thread-2] Initializing /data/public/2009-09/z-series.ome.xml: [testng] [2024-04-27 02:29:53,182] [pool-1-thread-8] Initializing /data/public/2008-09/z-series-time-series.ome.xml: [testng] [2024-04-27 02:29:53,253] [pool-1-thread-7] Initializing /data/public/2015-01/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-04-27 02:29:53,322] [pool-1-thread-10] Initializing /data/public/2011-06/xmlannotation-svg.ome.xml: [testng] [2024-04-27 02:29:53,424] [pool-1-thread-9] Initializing /data/public/2015-01/transformations-downgrade.ome.xml: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10706, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 7 seconds Finished: SUCCESS