Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 53
originally caused by:
 Started by upstream project "Trigger" build number 60
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins855259917356071135.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_7692_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:21:56,049 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:21:56,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:21:56,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:56,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:56,053 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:21:56,054 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:21:56,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:21:56,054 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:56,055 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:56,056 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:21:56,056 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:21:56,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:21:56,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:21:56,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:21:56,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:21:56,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:21:56,333 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:21:56,334 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:21:56,334 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:21:56,334 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:21:56,334 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:21:56,335 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:21:56,335 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 280 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-04 01:21:56,346] [main] java.version = 11.0.16
   [testng] 01:21:56,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:21:56,350 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:56,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-04_01-21-56.log]
   [testng] 01:21:56,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-05-04 01:21:56,407] [main] testng.directory = /data
   [testng] [2024-05-04 01:21:56,407] [main] testng.configDirectory = /config
   [testng] [2024-05-04 01:21:56,419] [main] testng.multiplier = 1.0
   [testng] [2024-05-04 01:21:56,420] [main] testng.in-memory = false
   [testng] [2024-05-04 01:21:56,420] [main] testng.allow-missing = false
   [testng] [2024-05-04 01:21:56,420] [main] user.language = en
   [testng] [2024-05-04 01:21:56,420] [main] user.country = ${user.country}
   [testng] [2024-05-04 01:21:56,421] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-05-04 01:22:10,402] [main] ----------------------------------------
   [testng] [2024-05-04 01:22:10,403] [main] Total files: 283
   [testng] [2024-05-04 01:22:10,403] [main] Scan time: 13.981 s (49 ms/file)
   [testng] [2024-05-04 01:22:10,403] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-04 01:30:32,630] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] 01:30:32,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:30:32,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:32,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-04_01-30-32.log]
   [testng] 01:30:32,635 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6206e062 - End of configuration.
   [testng] [2024-05-04 01:30:32,939] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] 01:30:32,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:30:32,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:32,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-04_01-30-32.log]
   [testng] 01:30:32,940 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58e5a087 - End of configuration.
   [testng] [2024-05-04 01:30:33,055] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] 01:30:33,055 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:30:33,055 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,056 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-04_01-30-33.log]
   [testng] 01:30:33,057 |-INFO in ch.qos.logback.core.sift.SiftProcessor@690e24e0 - End of configuration.
   [testng] [2024-05-04 01:30:33,125] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] 01:30:33,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:30:33,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-04_01-30-33.log]
   [testng] 01:30:33,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11eb65c8 - End of configuration.
   [testng] [2024-05-04 01:30:33,253] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] 01:30:33,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:30:33,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-04_01-30-33.log]
   [testng] 01:30:33,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63cca506 - End of configuration.
   [testng] [2024-05-04 01:30:33,368] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] 01:30:33,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:30:33,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,369 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-04_01-30-33.log]
   [testng] 01:30:33,369 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ad8b05e - End of configuration.
   [testng] [2024-05-04 01:30:33,526] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] 01:30:33,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:30:33,526 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,527 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-04_01-30-33.log]
   [testng] 01:30:33,527 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6cd1b88b - End of configuration.
   [testng] [2024-05-04 01:30:33,735] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] 01:30:33,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:30:33,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,736 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-04_01-30-33.log]
   [testng] 01:30:33,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a882ab4 - End of configuration.
   [testng] [2024-05-04 01:30:33,914] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] 01:30:33,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:30:33,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,916 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-04_01-30-33.log]
   [testng] 01:30:33,916 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f89e950 - End of configuration.
   [testng] [2024-05-04 01:30:33,972] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] 01:30:33,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:30:33,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,973 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-04_01-30-33.log]
   [testng] 01:30:33,973 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20cc44e5 - End of configuration.
   [testng] [2024-05-04 01:30:37,171] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] 01:30:37,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:30:37,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:37,172 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-04_01-30-37.log]
   [testng] 01:30:37,172 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dcb5515 - End of configuration.
   [testng] [2024-05-04 01:30:37,253] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] 01:30:37,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:30:37,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:37,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-04_01-30-37.log]
   [testng] 01:30:37,254 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59550227 - End of configuration.
   [testng] [2024-05-04 01:30:39,399] [pool-1-thread-5] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-05-04 01:30:40,804] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-05-04 01:30:40,974] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-05-04 01:30:41,060] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-05-04 01:30:41,145] [pool-1-thread-7] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-05-04 01:30:41,338] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-05-04 01:30:41,589] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-05-04 01:30:41,733] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-05-04 01:30:41,791] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-05-04 01:30:42,708] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-05-04 01:30:42,961] [pool-1-thread-9] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-05-04 01:30:43,746] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-05-04 01:30:43,979] [pool-1-thread-11] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-05-04 01:30:44,258] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2024-05-04 01:30:44,822] [pool-1-thread-7] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] [2024-05-04 01:31:06,477] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-05-04 01:31:06,547] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-05-04 01:31:07,542] [pool-1-thread-8] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-05-04 01:31:07,920] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] [2024-05-04 01:31:08,012] [pool-1-thread-1] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-05-04 01:31:08,355] [pool-1-thread-3] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-05-04 01:31:10,048] [pool-1-thread-2] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-05-04 01:31:10,107] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-05-04 01:31:10,515] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] [2024-05-04 01:31:10,572] [pool-1-thread-11] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-05-04 01:31:12,129] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-05-04 01:31:12,340] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-05-04 01:31:12,384] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-05-04 01:31:12,712] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-05-04 01:31:13,448] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-05-04 01:31:13,555] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-05-04 01:31:14,186] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-05-04 01:31:14,323] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-05-04 01:31:14,545] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-05-04 01:31:15,142] [pool-1-thread-8] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2024-05-04 01:31:15,336] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-05-04 01:31:15,770] [pool-1-thread-6] Initializing /data/qa-17919/f10187.oir: 
   [testng] [2024-05-04 01:31:34,399] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-05-04 01:31:34,543] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-05-04 01:31:35,914] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-05-04 01:31:36,019] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2024-05-04 01:31:36,189] [pool-1-thread-12] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2024-05-04 01:31:36,374] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-05-04 01:31:36,753] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2024-05-04 01:31:36,993] [pool-1-thread-9] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-05-04 01:31:37,220] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-05-04 01:31:37,524] [pool-1-thread-3] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-05-04 01:31:37,838] [pool-1-thread-5] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-05-04 01:31:37,903] [pool-1-thread-11] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-05-04 01:31:38,069] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-05-04 01:31:40,132] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-05-04 01:31:40,357] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-05-04 01:31:40,586] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-05-04 01:31:41,195] [pool-1-thread-9] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-05-04 01:31:42,094] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-05-04 01:31:42,146] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-05-04 01:31:42,483] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-05-04 01:31:42,582] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-05-04 01:31:43,073] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-05-04 01:31:43,646] [pool-1-thread-1] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-05-04 01:31:44,316] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-05-04 01:31:44,456] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-05-04 01:31:44,525] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-05-04 01:31:44,567] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-05-04 01:31:44,674] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-05-04 01:31:44,981] [pool-1-thread-11] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-05-04 01:31:45,593] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-05-04 01:31:46,195] [pool-1-thread-8] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-05-04 01:31:46,337] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-05-04 01:31:46,518] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-05-04 01:31:46,601] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-05-04 01:31:46,858] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-05-04 01:31:47,076] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-05-04 01:31:47,157] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-05-04 01:31:47,367] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-05-04 01:31:48,087] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-05-04 01:31:48,175] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-05-04 01:31:48,593] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-05-04 01:31:48,680] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-05-04 01:31:48,949] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-05-04 01:31:49,118] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-05-04 01:31:49,528] [pool-1-thread-2] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-05-04 01:31:49,589] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-05-04 01:31:49,917] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-05-04 01:31:50,331] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-05-04 01:31:50,755] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir: 
   [testng] [2024-05-04 01:31:51,248] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-05-04 01:31:51,415] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-05-04 01:31:51,464] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2024-05-04 01:31:51,858] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-05-04 01:31:52,202] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-05-04 01:31:52,383] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-05-04 01:31:52,475] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-05-04 01:31:52,990] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-05-04 01:31:53,550] [pool-1-thread-11] Initializing /data/olympus/XYZt.oir: 
   [testng] [2024-05-04 01:31:54,670] [pool-1-thread-8] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-05-04 01:31:54,820] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] [2024-05-04 01:31:55,055] [pool-1-thread-12] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] [2024-05-04 01:31:55,557] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-05-04 01:31:55,706] [pool-1-thread-10] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-05-04 01:31:55,782] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-05-04 01:32:04,332] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-05-04 01:32:05,203] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-05-04 01:32:05,791] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-05-04 01:32:06,213] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-05-04 01:32:06,378] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-05-04 01:32:07,074] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-05-04 01:32:07,333] [pool-1-thread-12] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-05-04 01:32:08,073] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-05-04 01:32:08,312] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-05-04 01:32:08,698] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-05-04 01:32:08,773] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-05-04 01:32:09,145] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-05-04 01:32:09,739] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-05-04 01:32:10,216] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-05-04 01:32:11,110] [pool-1-thread-11] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-05-04 01:32:41,535] [pool-1-thread-9] Initializing /data/qa-17335/1.ome.tif: 
   [testng] [2024-05-04 01:32:41,782] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-05-04 01:32:42,253] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-05-04 01:32:42,572] [pool-1-thread-12] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-05-04 01:32:42,843] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] [2024-05-04 01:32:44,581] [pool-1-thread-2] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] [2024-05-04 01:32:45,069] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2024-05-04 01:32:45,707] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-05-04 01:32:45,890] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] [2024-05-04 01:32:45,954] [pool-1-thread-12] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-05-04 01:32:53,272] [pool-1-thread-9] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-05-04 01:32:53,762] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2024-05-04 01:32:53,842] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2024-05-04 01:32:54,729] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-05-04 01:32:55,209] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-05-04 01:32:55,679] [pool-1-thread-2] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-05-04 01:32:55,848] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-05-04 01:32:59,103] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-05-04 01:32:59,914] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-05-04 01:33:45,594] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-05-04 01:33:47,013] [pool-1-thread-9] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-05-04 01:33:47,515] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-05-04 01:33:47,582] [pool-1-thread-8] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-05-04 01:33:48,274] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-05-04 01:33:48,666] [pool-1-thread-9] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-05-04 01:33:49,159] [pool-1-thread-8] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-05-04 01:33:49,200] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-05-04 01:33:50,011] [pool-1-thread-9] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-05-04 01:33:50,573] [pool-1-thread-2] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-05-04 01:33:51,236] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-05-04 01:33:51,412] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-05-04 01:33:51,676] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-05-04 01:33:52,537] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-05-04 01:33:54,726] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] [2024-05-04 01:33:54,796] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-05-04 01:33:55,926] [pool-1-thread-2] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-05-04 01:33:56,538] [pool-1-thread-9] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-05-04 01:33:57,411] [pool-1-thread-10] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2024-05-04 01:33:57,868] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-05-04 01:33:58,846] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-05-04 01:34:00,105] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] [2024-05-04 01:34:00,287] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-05-04 01:34:00,680] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-05-04 01:34:03,905] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-05-04 01:34:04,617] [pool-1-thread-9] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-05-04 01:34:04,936] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-05-04 01:34:06,462] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-05-04 01:34:06,766] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-05-04 01:34:07,037] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] [2024-05-04 01:34:07,268] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-05-04 01:34:08,247] [pool-1-thread-12] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-05-04 01:34:08,606] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2024-05-04 01:34:08,846] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-05-04 01:34:09,437] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-05-04 01:34:09,717] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-05-04 01:34:10,353] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-05-04 01:34:10,657] [pool-1-thread-5] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-05-04 01:36:34,679] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 56 minutes 32 seconds
Finished: SUCCESS