Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 54
originally caused by:
 Started by upstream project "Trigger" build number 61
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8
[BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins12876718989111442048.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_7856_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:21:03,284 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:21:03,286 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:21:03,286 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:03,287 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:03,288 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:21:03,288 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:21:03,289 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:21:03,289 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:03,289 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:03,290 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:21:03,291 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:21:03,291 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:21:03,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:21:03,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:21:03,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:21:03,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:21:03,572 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:21:03,572 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:21:03,573 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:21:03,573 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:21:03,573 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:21:03,574 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:21:03,575 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 286 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-05-05 01:21:03,588] [main] java.version = 17.0.2
   [testng] 01:21:03,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:21:03,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:03,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-05_01-21-03.log]
   [testng] 01:21:03,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-05-05 01:21:03,653] [main] testng.directory = /data
   [testng] [2024-05-05 01:21:03,653] [main] testng.configDirectory = /config
   [testng] [2024-05-05 01:21:03,666] [main] testng.multiplier = 1.0
   [testng] [2024-05-05 01:21:03,667] [main] testng.in-memory = false
   [testng] [2024-05-05 01:21:03,667] [main] testng.allow-missing = false
   [testng] [2024-05-05 01:21:03,667] [main] user.language = en
   [testng] [2024-05-05 01:21:03,667] [main] user.country = ${user.country}
   [testng] [2024-05-05 01:21:03,667] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-05-05 01:21:21,871] [main] ----------------------------------------
   [testng] [2024-05-05 01:21:21,871] [main] Total files: 283
   [testng] [2024-05-05 01:21:21,871] [main] Scan time: 18.203 s (64 ms/file)
   [testng] [2024-05-05 01:21:21,871] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-05-05 01:28:58,012] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] 01:28:58,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:28:58,012 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:58,013 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-05_01-28-58.log]
   [testng] 01:28:58,013 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18fc0faf - End of configuration.
   [testng] [2024-05-05 01:28:58,440] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] 01:28:58,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:28:58,440 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:58,441 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-05_01-28-58.log]
   [testng] 01:28:58,441 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61afbed8 - End of configuration.
   [testng] [2024-05-05 01:28:58,484] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] 01:28:58,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:28:58,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:58,485 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-05_01-28-58.log]
   [testng] 01:28:58,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b57e119 - End of configuration.
   [testng] [2024-05-05 01:28:58,565] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] 01:28:58,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:28:58,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:58,566 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-05_01-28-58.log]
   [testng] 01:28:58,567 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2acd5679 - End of configuration.
   [testng] [2024-05-05 01:28:58,649] [pool-1-thread-9] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] 01:28:58,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:28:58,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:28:58,651 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-05_01-28-58.log]
   [testng] 01:28:58,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ae5856a - End of configuration.
   [testng] [2024-05-05 01:31:48,267] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] 01:31:48,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:31:48,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:48,269 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-05_01-31-48.log]
   [testng] 01:31:48,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50b4b54e - End of configuration.
   [testng] [2024-05-05 01:31:48,445] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] 01:31:48,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:31:48,445 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:48,446 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-05_01-31-48.log]
   [testng] 01:31:48,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42777c68 - End of configuration.
   [testng] [2024-05-05 01:31:48,769] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] 01:31:48,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:31:48,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:48,770 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-05_01-31-48.log]
   [testng] 01:31:48,770 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ebfbecd - End of configuration.
   [testng] [2024-05-05 01:31:48,890] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] 01:31:48,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:31:48,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:48,891 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-05_01-31-48.log]
   [testng] 01:31:48,892 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18d891de - End of configuration.
   [testng] [2024-05-05 01:31:48,970] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] 01:31:48,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:31:48,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:48,971 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-05_01-31-48.log]
   [testng] 01:31:48,971 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78730758 - End of configuration.
   [testng] [2024-05-05 01:31:49,010] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] 01:31:49,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:31:49,010 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:49,011 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-05_01-31-49.log]
   [testng] 01:31:49,011 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fb7a0c2 - End of configuration.
   [testng] [2024-05-05 01:31:49,121] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] 01:31:49,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:31:49,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:49,122 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-05_01-31-49.log]
   [testng] 01:31:49,122 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54d93867 - End of configuration.
   [testng] [2024-05-05 01:31:51,637] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-05-05 01:31:51,955] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-05-05 01:31:53,849] [pool-1-thread-4] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-05-05 01:31:55,272] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-05-05 01:31:55,542] [pool-1-thread-2] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-05-05 01:31:55,618] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-05-05 01:31:55,835] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-05-05 01:31:55,944] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-05-05 01:31:56,265] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-05-05 01:31:56,766] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-05-05 01:31:58,457] [pool-1-thread-5] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-05-05 01:31:59,445] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] [2024-05-05 01:31:59,669] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-05-05 01:31:59,745] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-05-05 01:32:02,078] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-05-05 01:32:02,145] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-05-05 01:32:02,360] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] [2024-05-05 01:32:02,894] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-05-05 01:32:02,952] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.oir: 
   [testng] [2024-05-05 01:32:04,577] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-05-05 01:32:05,175] [pool-1-thread-11] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-05-05 01:32:06,141] [pool-1-thread-8] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-05-05 01:32:06,257] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-05-05 01:32:06,322] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-05-05 01:32:08,013] [pool-1-thread-12] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-05-05 01:32:08,373] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-05-05 01:32:08,671] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-05-05 01:32:11,492] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-05-05 01:32:11,599] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] [2024-05-05 01:32:12,875] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-05-05 01:32:14,144] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-05-05 01:32:14,192] [pool-1-thread-6] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-05-05 01:32:19,931] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-05-05 01:32:21,103] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-05-05 01:32:21,499] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-05-05 01:32:22,553] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-05-05 01:32:22,741] [pool-1-thread-5] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-05-05 01:32:22,914] [pool-1-thread-10] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-05-05 01:32:23,070] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-05-05 01:32:25,428] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-05-05 01:32:25,670] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-05-05 01:32:26,154] [pool-1-thread-4] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-05-05 01:32:26,629] [pool-1-thread-1] Initializing /data/qa-17335/1.ome.tif: 
   [testng] [2024-05-05 01:32:27,569] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-05-05 01:32:27,903] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-05-05 01:32:28,609] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-05-05 01:32:28,911] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-05-05 01:32:29,033] [pool-1-thread-1] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] [2024-05-05 01:32:29,091] [pool-1-thread-10] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-05-05 01:32:29,884] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-05-05 01:32:30,012] [pool-1-thread-4] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-05-05 01:32:30,253] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] [2024-05-05 01:32:30,366] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-05-05 01:32:30,460] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-05-05 01:32:30,668] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-05-05 01:32:32,207] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-05-05 01:32:32,429] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-05-05 01:32:32,616] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-05-05 01:32:32,820] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2024-05-05 01:32:33,051] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-05-05 01:32:34,064] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-05-05 01:32:34,762] [pool-1-thread-11] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-05-05 01:32:35,085] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-05-05 01:32:35,350] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2024-05-05 01:32:35,438] [pool-1-thread-4] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-05-05 01:32:35,985] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-05-05 01:32:36,363] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-05-05 01:32:36,628] [pool-1-thread-12] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-05-05 01:32:36,706] [pool-1-thread-5] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-05-05 01:32:36,769] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-05-05 01:32:38,029] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-05-05 01:32:38,432] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-05-05 01:32:38,844] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] [2024-05-05 01:32:38,891] [pool-1-thread-12] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-05-05 01:32:39,354] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-05-05 01:32:39,908] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2024-05-05 01:32:40,433] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-05-05 01:32:40,614] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-05-05 01:32:40,746] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-05-05 01:32:41,085] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-05-05 01:32:41,301] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-05-05 01:32:41,570] [pool-1-thread-1] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-05-05 01:32:41,941] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-05-05 01:32:42,588] [pool-1-thread-12] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2024-05-05 01:32:42,645] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-05-05 01:32:42,696] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2024-05-05 01:32:43,010] [pool-1-thread-10] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-05-05 01:32:43,430] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2024-05-05 01:32:43,764] [pool-1-thread-4] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2024-05-05 01:32:44,596] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-05-05 01:32:44,661] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-05-05 01:32:44,814] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-05-05 01:32:45,254] [pool-1-thread-5] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-05-05 01:32:45,749] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-05-05 01:32:46,628] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-05-05 01:32:47,819] [pool-1-thread-4] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-05-05 01:32:48,218] [pool-1-thread-12] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-05-05 01:32:48,515] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-05-05 01:32:48,951] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-05-05 01:32:49,516] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-05-05 01:32:49,608] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-05-05 01:32:49,820] [pool-1-thread-4] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-05-05 01:32:50,070] [pool-1-thread-5] Initializing /data/olympus/XYZt.oir: 
   [testng] [2024-05-05 01:32:51,266] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-05-05 01:32:51,502] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-05-05 01:33:39,932] [pool-1-thread-8] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2024-05-05 01:33:40,251] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-05-05 01:33:40,299] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-05-05 01:33:41,087] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-05-05 01:33:41,185] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-05-05 01:33:41,495] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-05-05 01:33:42,626] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-05-05 01:33:42,698] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-05-05 01:33:42,903] [pool-1-thread-7] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-05-05 01:33:44,002] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-05-05 01:33:44,390] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-05-05 01:33:44,694] [pool-1-thread-6] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-05-05 01:33:44,783] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-05-05 01:33:45,274] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-05-05 01:33:45,634] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-05-05 01:33:49,412] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-05-05 01:33:49,964] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-05-05 01:33:50,182] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-05-05 01:33:50,680] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-05-05 01:33:50,761] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-05-05 01:33:51,013] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-05-05 01:33:51,450] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-05-05 01:33:51,602] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-05-05 01:33:51,733] [pool-1-thread-5] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-05-05 01:34:25,213] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-05-05 01:34:25,283] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-05-05 01:34:32,007] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] [2024-05-05 01:34:32,042] [pool-1-thread-1] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-05-05 01:34:32,399] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] [2024-05-05 01:34:32,801] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-05-05 01:34:32,863] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-05-05 01:34:33,239] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-05-05 01:34:33,676] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-05-05 01:34:34,033] [pool-1-thread-1] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] [2024-05-05 01:34:57,430] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-05-05 01:34:57,823] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-05-05 01:34:57,874] [pool-1-thread-2] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-05-05 01:34:58,134] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-05-05 01:34:58,605] [pool-1-thread-7] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-05-05 01:34:58,664] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-05-05 01:34:59,295] [pool-1-thread-4] Initializing /data/qa-17919/f10187.oir: 
   [testng] [2024-05-05 01:35:21,184] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-05-05 01:35:21,421] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] [2024-05-05 01:35:21,722] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-05-05 01:35:22,069] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-05-05 01:35:22,599] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-05-05 01:35:22,944] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-05-05 01:35:23,138] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-05-05 01:35:23,287] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-05-05 01:35:23,342] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-05-05 01:35:23,627] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-05-05 01:35:25,037] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-05-05 01:35:25,247] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2024-05-05 01:35:25,462] [pool-1-thread-12] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-05-05 01:35:30,130] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-05-05 01:35:30,363] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-05-05 01:35:40,884] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2024-05-05 01:35:41,503] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-05-05 01:35:41,952] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-05-05 01:35:42,599] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-05-05 01:35:42,719] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-05-05 01:35:43,844] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-05-05 01:35:44,014] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-05-05 01:35:44,988] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-05-05 01:35:45,293] [pool-1-thread-12] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-05-05 01:35:46,836] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-05-05 01:35:47,173] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] [2024-05-05 01:35:47,287] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-05-05 01:35:48,333] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 44 minutes 12 seconds
Finished: SUCCESS