Started by upstream project "BIOFORMATS-test-repo" build number 55 originally caused by: Started by upstream project "Trigger" build number 62 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins5133480549270440854.sh + '[' afi = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_8090_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:52:57,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:52:57,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:52:57,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:52:57,368 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:52:57,381 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:52:57,382 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:52:57,382 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:52:57,383 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:52:57,383 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:52:57,384 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:52:57,384 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 725 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-06 01:52:57,400] [main] java.version = 1.8.0_342 [testng] 01:52:57,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:52:57,405 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:52:57,587 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-06_01-52-57.log] [testng] 01:52:57,589 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-06 01:52:57,591] [main] testng.directory = /data [testng] [2024-05-06 01:52:57,591] [main] testng.configDirectory = /config [testng] [2024-05-06 01:52:57,622] [main] testng.multiplier = 1.0 [testng] [2024-05-06 01:52:57,622] [main] testng.in-memory = false [testng] [2024-05-06 01:52:57,622] [main] testng.allow-missing = false [testng] [2024-05-06 01:52:57,622] [main] user.language = fr [testng] [2024-05-06 01:52:57,623] [main] user.country = FR [testng] [2024-05-06 01:52:57,623] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-06 01:52:58,581] [main] ---------------------------------------- [testng] [2024-05-06 01:52:58,581] [main] Total files: 16 [testng] [2024-05-06 01:52:58,581] [main] Scan time: 0.958 s (59 ms/file) [testng] [2024-05-06 01:52:58,582] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 15 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-06 01:53:10,415] [pool-1-thread-2] Initializing /data/samples/5407.afi: [testng] 01:53:10,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:53:10,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:10,417 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-06_01-53-10.log] [testng] 01:53:10,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@115efcb1 - End of configuration. [testng] [2024-05-06 01:53:10,512] [pool-1-thread-12] Initializing /data/samples/5347.afi: [testng] 01:53:10,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:53:10,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:10,514 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-06_01-53-10.log] [testng] 01:53:10,515 |-INFO in ch.qos.logback.core.sift.SiftProcessor@327c1061 - End of configuration. [testng] [2024-05-06 01:53:10,679] [pool-1-thread-11] Initializing /data/samples/5383.afi: [testng] 01:53:10,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:53:10,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:10,682 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-06_01-53-10.log] [testng] 01:53:10,683 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72f21ef - End of configuration. [testng] [2024-05-06 01:53:10,798] [pool-1-thread-10] Initializing /data/samples/5306.afi: [testng] 01:53:10,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:53:10,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:10,800 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-06_01-53-10.log] [testng] 01:53:10,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76b9660d - End of configuration. [testng] [2024-05-06 01:53:10,894] [pool-1-thread-9] Initializing /data/samples/5400.afi: [testng] 01:53:10,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:53:10,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:10,896 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-06_01-53-10.log] [testng] 01:53:10,897 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e0ed383 - End of configuration. [testng] [2024-05-06 01:53:11,005] [pool-1-thread-8] Initializing /data/samples/5365.afi: [testng] 01:53:11,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:53:11,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:11,007 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-06_01-53-11.log] [testng] 01:53:11,008 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d4eab11 - End of configuration. [testng] [2024-05-06 01:53:11,228] [pool-1-thread-7] Initializing /data/samples/5358.afi: [testng] 01:53:11,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:53:11,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:11,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-06_01-53-11.log] [testng] 01:53:11,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d0baeae - End of configuration. [testng] [2024-05-06 01:53:11,322] [pool-1-thread-6] Initializing /data/samples/5446.afi: [testng] 01:53:11,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:53:11,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:11,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-06_01-53-11.log] [testng] 01:53:11,325 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15619143 - End of configuration. [testng] [2024-05-06 01:53:11,416] [pool-1-thread-5] Initializing /data/samples/5414.afi: [testng] 01:53:11,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:53:11,416 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:11,417 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-06_01-53-11.log] [testng] 01:53:11,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7de4cd83 - End of configuration. [testng] [2024-05-06 01:53:11,538] [pool-1-thread-4] Initializing /data/samples/5371.afi: [testng] 01:53:11,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:53:11,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:11,539 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-06_01-53-11.log] [testng] 01:53:11,539 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21a0653a - End of configuration. [testng] [2024-05-06 01:53:11,609] [pool-1-thread-1] Initializing /data/samples/5343.afi: [testng] 01:53:11,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:53:11,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:11,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-06_01-53-11.log] [testng] 01:53:11,611 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d9a9c6f - End of configuration. [testng] [2024-05-06 01:53:12,136] [pool-1-thread-3] Initializing /data/samples/5387.afi: [testng] 01:53:12,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:53:12,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:12,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-06_01-53-12.log] [testng] 01:53:12,138 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e70712f - End of configuration. [testng] [2024-05-06 01:54:02,687] [pool-1-thread-4] Initializing /data/samples/5440.afi: [testng] [2024-05-06 01:54:02,770] [pool-1-thread-9] Initializing /data/samples/5339.afi: [testng] [2024-05-06 01:54:03,267] [pool-1-thread-12] Initializing /data/samples/5351.afi: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 795, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 0 seconds Finished: SUCCESS