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Started by upstream project "BIOFORMATS-test-repo" build number 6
originally caused by:
 Started by upstream project "Trigger" build number 9
 originally caused by:
  Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9
[BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins16157021512386205151.sh
+ '[' canon = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_834_merge_ci -v /uod/idr/repos/curated/canon:/data -v /uod/idr-scratch/merge-ci/curated/canon:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 09:50:29,428 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 09:50:29,430 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 09:50:29,430 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 09:50:29,430 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 09:50:29,431 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 09:50:29,431 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 09:50:29,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 09:50:29,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 09:50:29,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 09:50:29,433 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 09:50:29,433 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 09:50:29,434 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 09:50:29,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 09:50:29,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 09:50:29,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 09:50:29,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 09:50:29,633 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 09:50:29,633 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 09:50:29,633 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 09:50:29,633 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 09:50:29,633 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 09:50:29,635 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 09:50:29,635 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-03-20 09:50:29,644] [main] java.version = 17.0.2
   [testng] 09:50:29,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 09:50:29,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:29,689 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-20_09-50-29.log]
   [testng] 09:50:29,690 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-03-20 09:50:29,693] [main] testng.directory = /data
   [testng] [2024-03-20 09:50:29,693] [main] testng.configDirectory = /config
   [testng] [2024-03-20 09:50:29,702] [main] testng.multiplier = 1.0
   [testng] [2024-03-20 09:50:29,702] [main] testng.in-memory = false
   [testng] [2024-03-20 09:50:29,703] [main] testng.allow-missing = false
   [testng] [2024-03-20 09:50:29,703] [main] user.language = en
   [testng] [2024-03-20 09:50:29,703] [main] user.country = ${user.country}
   [testng] [2024-03-20 09:50:29,703] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-03-20 09:50:31,612] [main] ----------------------------------------
   [testng] [2024-03-20 09:50:31,613] [main] Total files: 13
   [testng] [2024-03-20 09:50:31,613] [main] Scan time: 1.909 s (146 ms/file)
   [testng] [2024-03-20 09:50:31,613] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-03-20 09:50:34,892] [pool-1-thread-1] Initializing /data/cls/_N5Y0001.CR2: 
   [testng] 09:50:34,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 09:50:34,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:34,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-20_09-50-34.log]
   [testng] 09:50:34,894 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b894a7b - End of configuration.
   [testng] [2024-03-20 09:50:35,029] [pool-1-thread-12] Initializing /data/pete/Learning to Fly.JPG: 
   [testng] 09:50:35,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 09:50:35,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:35,031 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-20_09-50-35.log]
   [testng] 09:50:35,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@de7687d - End of configuration.
   [testng] [2024-03-20 09:50:35,304] [pool-1-thread-11] Initializing /data/pete/Raw-WAV.WAV: 
   [testng] 09:50:35,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 09:50:35,304 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:35,305 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-20_09-50-35.log]
   [testng] 09:50:35,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a6c0038 - End of configuration.
   [testng] [2024-03-20 09:50:35,502] [pool-1-thread-10] Initializing /data/pete/DNG-WAV.WAV: 
   [testng] 09:50:35,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 09:50:35,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:35,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-20_09-50-35.log]
   [testng] 09:50:35,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6548f089 - End of configuration.
   [testng] [2024-03-20 09:50:35,639] [pool-1-thread-9] Initializing /data/pete/DNG-CR2.CR2: 
   [testng] 09:50:35,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 09:50:35,639 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:35,640 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-20_09-50-35.log]
   [testng] 09:50:35,640 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54f7153b - End of configuration.
   [testng] [2024-03-20 09:50:35,708] [pool-1-thread-8] Initializing /data/pete/DNG-JPG.JPG: 
   [testng] 09:50:35,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 09:50:35,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:35,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-20_09-50-35.log]
   [testng] 09:50:35,710 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e2aac - End of configuration.
   [testng] [2024-03-20 09:50:35,800] [pool-1-thread-7] Initializing /data/pete/Raw-JPG.JPG: 
   [testng] 09:50:35,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 09:50:35,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:35,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-20_09-50-35.log]
   [testng] 09:50:35,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4768481c - End of configuration.
   [testng] [2024-03-20 09:50:36,160] [pool-1-thread-6] Initializing /data/pete/DNG-CRW.CRW: 
   [testng] 09:50:36,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 09:50:36,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:36,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-20_09-50-36.log]
   [testng] 09:50:36,162 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cdf98e0 - End of configuration.
   [testng] [2024-03-20 09:50:36,252] [pool-1-thread-5] Initializing /data/pete/DNG-THM.THM: 
   [testng] 09:50:36,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 09:50:36,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:36,253 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-20_09-50-36.log]
   [testng] 09:50:36,253 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f5d0a6b - End of configuration.
   [testng] [2024-03-20 09:50:36,320] [pool-1-thread-4] Initializing /data/pete/Raw-CRW.CRW: 
   [testng] 09:50:36,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 09:50:36,321 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:36,321 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-20_09-50-36.log]
   [testng] 09:50:36,322 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ceb8a20 - End of configuration.
   [testng] [2024-03-20 09:50:36,659] [pool-1-thread-3] Initializing /data/kinor/2013_03_08_0808.CR2: 
   [testng] 09:50:36,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 09:50:36,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:36,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-20_09-50-36.log]
   [testng] 09:50:36,661 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45638c97 - End of configuration.
   [testng] [2024-03-20 09:50:36,758] [pool-1-thread-2] Initializing /data/pete/Raw-THM.THM: 
   [testng] 09:50:36,758 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 09:50:36,758 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 09:50:36,759 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-20_09-50-36.log]
   [testng] 09:50:36,759 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36a4de6a - End of configuration.
   [testng] [2024-03-20 09:50:41,918] [pool-1-thread-1] Initializing /data/pete/Raw-CR2.CR2: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 27 seconds
Finished: SUCCESS