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Started by upstream project "BIOFORMATS-test-repo" build number 59 originally caused by: Started by upstream project "Trigger" build number 66 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins17488614448203705317.sh + '[' lim = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_8680_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:24,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:24,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:24,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:24,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:24,220 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:24,220 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:24,220 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:24,221 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:24,221 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:21:24,221 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:21:24,222 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 504 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-10 01:21:24,232] [main] java.version = 1.8.0_342 [testng] 01:21:24,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:24,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:24,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-10_01-21-24.log] [testng] 01:21:24,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-10 01:21:24,286] [main] testng.directory = /data [testng] [2024-05-10 01:21:24,286] [main] testng.configDirectory = /config [testng] [2024-05-10 01:21:24,299] [main] testng.multiplier = 1.0 [testng] [2024-05-10 01:21:24,299] [main] testng.in-memory = false [testng] [2024-05-10 01:21:24,299] [main] testng.allow-missing = false [testng] [2024-05-10 01:21:24,299] [main] user.language = en [testng] [2024-05-10 01:21:24,299] [main] user.country = ${user.country} [testng] [2024-05-10 01:21:24,300] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-10 01:21:24,795] [main] ---------------------------------------- [testng] [2024-05-10 01:21:24,796] [main] Total files: 21 [testng] [2024-05-10 01:21:24,796] [main] Scan time: 0.495 s (23 ms/file) [testng] [2024-05-10 01:21:24,796] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 20 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-10 01:21:26,399] [pool-1-thread-1] Initializing /data/venu/Kontrolle0015.lim: [testng] 01:21:26,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:26,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,401 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-10_01-21-26.log] [testng] 01:21:26,401 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cd3616d - End of configuration. [testng] [2024-05-10 01:21:26,488] [pool-1-thread-12] Initializing /data/venu/Kontrolle0020.lim: [testng] 01:21:26,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:26,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-10_01-21-26.log] [testng] 01:21:26,490 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8e27135 - End of configuration. [testng] [2024-05-10 01:21:26,519] [pool-1-thread-11] Initializing /data/venu/Kontrolle0019.lim: [testng] 01:21:26,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:26,519 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,520 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-10_01-21-26.log] [testng] 01:21:26,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ac7180e - End of configuration. [testng] [2024-05-10 01:21:26,539] [pool-1-thread-10] Initializing /data/venu/Kontrolle0017.lim: [testng] 01:21:26,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:26,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,540 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-10_01-21-26.log] [testng] 01:21:26,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78dd0626 - End of configuration. [testng] [2024-05-10 01:21:26,558] [pool-1-thread-9] Initializing /data/venu/Kontrolle0016.lim: [testng] 01:21:26,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:26,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,559 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-10_01-21-26.log] [testng] 01:21:26,559 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b4c15c9 - End of configuration. [testng] [2024-05-10 01:21:26,576] [pool-1-thread-8] Initializing /data/venu/Kontrolle0008.lim: [testng] 01:21:26,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:26,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,578 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-10_01-21-26.log] [testng] 01:21:26,578 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f26fdb6 - End of configuration. [testng] [2024-05-10 01:21:26,591] [pool-1-thread-7] Initializing /data/venu/Kontrolle0001.lim: [testng] 01:21:26,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:26,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,592 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-10_01-21-26.log] [testng] 01:21:26,593 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51386736 - End of configuration. [testng] [2024-05-10 01:21:26,606] [pool-1-thread-6] Initializing /data/venu/Kontrolle0003.lim: [testng] 01:21:26,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:26,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,608 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-10_01-21-26.log] [testng] 01:21:26,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3698fb4a - End of configuration. [testng] [2024-05-10 01:21:26,627] [pool-1-thread-5] Initializing /data/venu/Kontrolle0012.lim: [testng] 01:21:26,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:26,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,628 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-10_01-21-26.log] [testng] 01:21:26,628 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3793f155 - End of configuration. [testng] [2024-05-10 01:21:26,642] [pool-1-thread-4] Initializing /data/venu/Kontrolle0009.lim: [testng] 01:21:26,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:26,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,643 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-10_01-21-26.log] [testng] 01:21:26,644 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7504e0f0 - End of configuration. [testng] [2024-05-10 01:21:26,661] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim: [testng] 01:21:26,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:26,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-10_01-21-26.log] [testng] 01:21:26,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eadbc94 - End of configuration. [testng] [2024-05-10 01:21:26,685] [pool-1-thread-2] Initializing /data/venu/Kontrolle0005.lim: [testng] 01:21:26,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:26,686 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,687 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-10_01-21-26.log] [testng] 01:21:26,687 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e6c1b29 - End of configuration. [testng] [2024-05-10 01:21:29,496] [pool-1-thread-1] Initializing /data/venu/Kontrolle0018.lim: [testng] [2024-05-10 01:21:29,508] [pool-1-thread-10] Initializing /data/venu/Kontrolle0002.lim: [testng] [2024-05-10 01:21:29,522] [pool-1-thread-6] Initializing /data/venu/Kontrolle0010.lim: [testng] [2024-05-10 01:21:29,537] [pool-1-thread-7] Initializing /data/venu/Kontrolle0004.lim: [testng] [2024-05-10 01:21:29,551] [pool-1-thread-11] Initializing /data/venu/Kontrolle0014.lim: [testng] [2024-05-10 01:21:29,572] [pool-1-thread-3] Initializing /data/venu/Kontrolle0011.lim: [testng] [2024-05-10 01:21:29,591] [pool-1-thread-8] Initializing /data/venu/Kontrolle0007.lim: [testng] [2024-05-10 01:21:29,606] [pool-1-thread-12] Initializing /data/venu/Kontrolle0021.lim: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1060, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 10 seconds Finished: SUCCESS