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Started by upstream project "BIOFORMATS-test-repo" build number 60 originally caused by: Started by upstream project "Trigger" build number 67 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins6091496527417192520.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_8832_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:57,426 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:57,427 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:20:57,427 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:57,428 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:57,429 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:57,429 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:57,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:57,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:57,430 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:57,431 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:57,431 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:57,431 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:57,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:57,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:57,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:57,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:57,619 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:57,619 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:57,619 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:57,620 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:57,620 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:20:57,621 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:20:57,621 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 191 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-11 01:20:57,629] [main] java.version = 11.0.16 [testng] 01:20:57,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:57,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:57,672 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-11_01-20-57.log] [testng] 01:20:57,674 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-05-11 01:20:57,676] [main] testng.directory = /data [testng] [2024-05-11 01:20:57,676] [main] testng.configDirectory = /config [testng] [2024-05-11 01:20:57,686] [main] testng.multiplier = 1.0 [testng] [2024-05-11 01:20:57,687] [main] testng.in-memory = false [testng] [2024-05-11 01:20:57,687] [main] testng.allow-missing = false [testng] [2024-05-11 01:20:57,687] [main] user.language = en [testng] [2024-05-11 01:20:57,687] [main] user.country = ${user.country} [testng] [2024-05-11 01:20:57,687] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-11 01:20:58,520] [main] ---------------------------------------- [testng] [2024-05-11 01:20:58,520] [main] Total files: 103 [testng] [2024-05-11 01:20:58,520] [main] Scan time: 0.833 s (8 ms/file) [testng] [2024-05-11 01:20:58,520] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-11 01:21:05,463] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] 01:21:05,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:05,464 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,466 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-11_01-21-05.log] [testng] 01:21:05,466 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e4a852c - End of configuration. [testng] [2024-05-11 01:21:05,496] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] 01:21:05,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:05,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-11_01-21-05.log] [testng] 01:21:05,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1753cd3f - End of configuration. [testng] [2024-05-11 01:21:05,518] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 01:21:05,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:05,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,519 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-11_01-21-05.log] [testng] 01:21:05,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@401df70b - End of configuration. [testng] [2024-05-11 01:21:05,579] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] 01:21:05,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:05,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,580 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-11_01-21-05.log] [testng] 01:21:05,580 |-INFO in ch.qos.logback.core.sift.SiftProcessor@255e6859 - End of configuration. [testng] [2024-05-11 01:21:05,605] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] 01:21:05,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:05,606 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,606 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-11_01-21-05.log] [testng] 01:21:05,607 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27bfc3c - End of configuration. [testng] [2024-05-11 01:21:05,681] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] 01:21:05,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:05,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,682 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-11_01-21-05.log] [testng] 01:21:05,683 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47d28a68 - End of configuration. [testng] [2024-05-11 01:21:05,919] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:21:05,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:05,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-11_01-21-05.log] [testng] 01:21:05,920 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9c7fd42 - End of configuration. [testng] [2024-05-11 01:21:05,991] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] 01:21:05,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:05,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,992 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-11_01-21-05.log] [testng] 01:21:05,992 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25fcc786 - End of configuration. [testng] [2024-05-11 01:21:06,036] [pool-1-thread-5] Initializing /data/ofra/lowloss.dm3: [testng] 01:21:06,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:06,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,037 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-11_01-21-06.log] [testng] 01:21:06,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51ffc66a - End of configuration. [testng] [2024-05-11 01:21:06,048] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] 01:21:06,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:06,048 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,049 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-11_01-21-06.log] [testng] 01:21:06,050 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b0acfc9 - End of configuration. [testng] [2024-05-11 01:21:06,097] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 01:21:06,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:06,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-11_01-21-06.log] [testng] 01:21:06,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bd11776 - End of configuration. [testng] [2024-05-11 01:21:06,109] [pool-1-thread-2] Initializing /data/jay/recAmaghi.dm3: [testng] 01:21:06,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:06,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,110 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-11_01-21-06.log] [testng] 01:21:06,110 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5afad74f - End of configuration. [testng] [2024-05-11 01:21:07,916] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-05-11 01:21:07,936] [pool-1-thread-1] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-05-11 01:21:07,964] [pool-1-thread-5] Initializing /data/jay/smallerfile.dm3: [testng] [2024-05-11 01:21:07,981] [pool-1-thread-6] Initializing /data/jay/DMtest2.dm3: [testng] [2024-05-11 01:21:08,184] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-05-11 01:21:08,556] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-11 01:21:08,601] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-05-11 01:21:08,924] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-05-11 01:21:08,935] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-05-11 01:21:09,047] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-05-11 01:21:09,409] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-05-11 01:21:09,564] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-05-11 01:21:09,655] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-05-11 01:21:09,963] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-05-11 01:21:10,590] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-11 01:21:10,859] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-05-11 01:21:10,883] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-05-11 01:21:11,789] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-05-11 01:21:12,274] [pool-1-thread-11] Initializing /data/samples/test-tiles.dm3: [testng] [2024-05-11 01:21:12,416] [pool-1-thread-1] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-05-11 01:21:12,481] [pool-1-thread-9] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-05-11 01:21:12,649] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-05-11 01:21:13,183] [pool-1-thread-6] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-05-11 01:21:13,636] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-05-11 01:21:14,234] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-05-11 01:21:14,284] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-05-11 01:21:15,200] [pool-1-thread-11] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-05-11 01:21:15,606] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-05-11 01:21:16,177] [pool-1-thread-7] Initializing /data/jay/camtest1.dm3: [testng] [2024-05-11 01:21:16,343] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-05-11 01:21:16,660] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-05-11 01:21:17,834] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-05-11 01:21:17,880] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-05-11 01:21:18,256] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-05-11 01:21:18,840] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-05-11 01:21:22,354] [pool-1-thread-1] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-05-11 01:21:22,777] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-05-11 01:21:23,631] [pool-1-thread-1] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-11 01:21:23,721] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-05-11 01:21:24,122] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-11 01:21:24,526] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-05-11 01:21:25,727] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-05-11 01:21:26,608] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-05-11 01:21:28,605] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-05-11 01:21:28,952] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-05-11 01:21:29,149] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-05-11 01:21:29,451] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-05-11 01:21:29,852] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-05-11 01:21:30,091] [pool-1-thread-7] Initializing /data/jay/dnasample.tif: [testng] [2024-05-11 01:21:30,529] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-11 01:21:30,968] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-05-11 01:21:31,701] [pool-1-thread-1] Initializing /data/jay/DMtest.dm3: [testng] [2024-05-11 01:21:33,427] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-05-11 01:21:33,607] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-05-11 01:21:34,070] [pool-1-thread-9] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-05-11 01:21:34,503] [pool-1-thread-8] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-05-11 01:21:34,629] [pool-1-thread-10] Initializing /data/qa-21761/example.dm4: [testng] [2024-05-11 01:21:35,230] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-05-11 01:21:35,426] [pool-1-thread-3] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-05-11 01:21:35,447] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-05-11 01:21:35,667] [pool-1-thread-10] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-05-11 01:21:35,775] [pool-1-thread-1] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-05-11 01:21:36,048] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-05-11 01:21:36,467] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-11 01:21:36,795] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-05-11 01:21:37,066] [pool-1-thread-11] Initializing /data/qa-7642/8.dm4: [testng] [2024-05-11 01:21:37,664] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-05-11 01:21:38,220] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-05-11 01:21:38,490] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-05-11 01:21:38,574] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-11 01:21:38,649] [pool-1-thread-6] Initializing /data/melissa/annotation-test.tif: [testng] [2024-05-11 01:21:38,824] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-05-11 01:21:39,028] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-05-11 01:21:39,565] [pool-1-thread-4] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-05-11 01:21:39,621] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-05-11 01:21:39,754] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-05-11 01:21:39,928] [pool-1-thread-11] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-05-11 01:21:40,075] [pool-1-thread-2] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-05-11 01:21:40,093] [pool-1-thread-10] Initializing /data/jay/dnasample1.dm3: [testng] [2024-05-11 01:21:40,117] [pool-1-thread-12] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-05-11 01:21:40,406] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-05-11 01:21:40,457] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-05-11 01:21:41,143] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-05-11 01:21:41,259] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-05-11 01:21:41,352] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-05-11 01:21:41,507] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 4 seconds Finished: SUCCESS