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Started by upstream project "BIOFORMATS-test-repo" build number 61 originally caused by: Started by upstream project "Trigger" build number 68 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins18106952935728667587.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_9005_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:14,054 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:14,055 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:14,055 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:14,057 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:14,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:14,057 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:14,058 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:14,058 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:14,058 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:14,059 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:14,059 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:14,059 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:14,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:14,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:14,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:14,269 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:14,274 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:14,274 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:14,274 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:14,275 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:14,275 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:14,276 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:14,276 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 218 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-12 01:21:14,285] [main] java.version = 17.0.2 [testng] 01:21:14,288 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:14,288 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:14,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-12_01-21-14.log] [testng] 01:21:14,330 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-05-12 01:21:14,332] [main] testng.directory = /data [testng] [2024-05-12 01:21:14,332] [main] testng.configDirectory = /config [testng] [2024-05-12 01:21:14,340] [main] testng.multiplier = 1.0 [testng] [2024-05-12 01:21:14,341] [main] testng.in-memory = false [testng] [2024-05-12 01:21:14,341] [main] testng.allow-missing = false [testng] [2024-05-12 01:21:14,341] [main] user.language = en [testng] [2024-05-12 01:21:14,341] [main] user.country = ${user.country} [testng] [2024-05-12 01:21:14,342] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-12 01:21:22,896] [main] ---------------------------------------- [testng] [2024-05-12 01:21:22,897] [main] Total files: 4424 [testng] [2024-05-12 01:21:22,897] [main] Scan time: 8.554 s (1 ms/file) [testng] [2024-05-12 01:21:22,897] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-12 01:23:17,472] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z023.tif: [testng] 01:23:17,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:17,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,475 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-12_01-23-17.log] [testng] 01:23:17,475 |-INFO in ch.qos.logback.core.sift.SiftProcessor@534b8ba2 - End of configuration. [testng] [2024-05-12 01:23:17,508] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 01:23:17,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:17,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-12_01-23-17.log] [testng] 01:23:17,510 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fe5dc98 - End of configuration. [testng] [2024-05-12 01:23:17,570] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] 01:23:17,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:17,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-12_01-23-17.log] [testng] 01:23:17,571 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38c10bee - End of configuration. [testng] [2024-05-12 01:23:17,636] [pool-1-thread-10] Initializing /data/josiah/cell-Z28.C1.tiff: [testng] 01:23:17,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:17,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,637 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-12_01-23-17.log] [testng] 01:23:17,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53567ac - End of configuration. [testng] [2024-05-12 01:23:17,673] [pool-1-thread-9] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 01:23:17,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:17,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,674 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-12_01-23-17.log] [testng] 01:23:17,674 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2decdf5f - End of configuration. [testng] [2024-05-12 01:23:17,712] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0248.TIF: [testng] 01:23:17,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:17,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,713 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-12_01-23-17.log] [testng] 01:23:17,713 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30609a03 - End of configuration. [testng] [2024-05-12 01:23:17,775] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z003.tif: [testng] 01:23:17,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:17,776 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,776 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-12_01-23-17.log] [testng] 01:23:17,777 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f7cb42b - End of configuration. [testng] [2024-05-12 01:23:17,801] [pool-1-thread-6] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] 01:23:17,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:17,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,803 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-12_01-23-17.log] [testng] 01:23:17,803 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67609478 - End of configuration. [testng] [2024-05-12 01:23:17,852] [pool-1-thread-5] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] 01:23:17,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:17,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-12_01-23-17.log] [testng] 01:23:17,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c66bfdf - End of configuration. [testng] [2024-05-12 01:23:17,902] [pool-1-thread-4] Initializing /data/marc/ball48_original_10x.tif: [testng] 01:23:17,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:17,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,903 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-12_01-23-17.log] [testng] 01:23:17,904 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39c87610 - End of configuration. [testng] [2024-05-12 01:23:17,925] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z004.tif: [testng] 01:23:17,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:17,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,926 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-12_01-23-17.log] [testng] 01:23:17,926 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ffdfd6d - End of configuration. [testng] [2024-05-12 01:23:17,959] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] 01:23:17,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:17,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:17,960 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-12_01-23-17.log] [testng] 01:23:17,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@660022f0 - End of configuration. [testng] [2024-05-12 01:23:20,165] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-05-12 01:23:20,215] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-05-12 01:23:20,253] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-05-12 01:23:20,280] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-05-12 01:23:20,300] [pool-1-thread-3] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-05-12 01:23:20,328] [pool-1-thread-10] Initializing /data/curtis/test3.tiff: [testng] [2024-05-12 01:23:20,356] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z040.tif: [testng] [2024-05-12 01:23:20,381] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z063.tif: [testng] [2024-05-12 01:23:20,400] [pool-1-thread-6] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-05-12 01:23:20,971] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] [2024-05-12 01:23:21,075] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-05-12 01:23:21,113] [pool-1-thread-7] Initializing /data/big-images/2kx2k.tif: [testng] [2024-05-12 01:23:21,183] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-05-12 01:23:21,211] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0225.TIF: [testng] [2024-05-12 01:23:21,267] [pool-1-thread-8] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-05-12 01:23:21,370] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-05-12 01:23:21,406] [pool-1-thread-1] Initializing /data/damian/09m.tiff: [testng] [2024-05-12 01:23:21,789] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z024.tif: [testng] [2024-05-12 01:23:21,969] [pool-1-thread-2] Initializing /data/josiah/cell-Z37.C1.tiff: [testng] [2024-05-12 01:23:22,019] [pool-1-thread-8] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-05-12 01:23:22,088] [pool-1-thread-9] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-05-12 01:23:22,199] [pool-1-thread-3] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-05-12 01:23:22,268] [pool-1-thread-1] Initializing /data/misc/mri-old.mov: [testng] [2024-05-12 01:23:22,571] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z012.tif: [testng] [2024-05-12 01:23:22,734] [pool-1-thread-1] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-05-12 01:23:22,816] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-05-12 01:23:22,994] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z028.tif: [testng] [2024-05-12 01:23:23,023] [pool-1-thread-10] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-05-12 01:23:23,180] [pool-1-thread-4] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-05-12 01:23:23,481] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z027.tif: [testng] [2024-05-12 01:23:23,619] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-05-12 01:23:23,839] [pool-1-thread-12] Initializing /data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-05-12 01:23:23,961] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-05-12 01:23:23,986] [pool-1-thread-7] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-05-12 01:23:24,063] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-05-12 01:23:24,176] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-05-12 01:23:24,257] [pool-1-thread-1] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-05-12 01:23:24,446] [pool-1-thread-9] Initializing /data/lzw/test.tif: [testng] [2024-05-12 01:23:24,667] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-05-12 01:23:24,908] [pool-1-thread-11] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-05-12 01:23:24,952] [pool-1-thread-10] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-05-12 01:23:27,692] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-05-12 01:23:27,975] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0218.TIF: [testng] [2024-05-12 01:23:28,174] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-05-12 01:23:28,216] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-05-12 01:23:28,259] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-05-12 01:23:28,297] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] 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[testng] [2024-05-12 01:25:21,053] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-05-12 01:25:21,245] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z020.tif: [testng] [2024-05-12 01:25:21,279] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-05-12 01:25:21,406] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0237.TIF: [testng] [2024-05-12 01:25:21,493] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-05-12 01:25:21,520] [pool-1-thread-11] Initializing /data/brian/insight.tiff: [testng] [2024-05-12 01:25:21,581] [pool-1-thread-7] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-05-12 01:25:21,775] [pool-1-thread-9] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-05-12 01:25:21,884] [pool-1-thread-5] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-05-12 01:25:21,952] 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/data/brian/retina/retina_C1_Z061.tif: [testng] [2024-05-12 01:25:23,156] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-05-12 01:25:23,186] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-05-12 01:25:23,278] [pool-1-thread-2] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-05-12 01:25:23,372] [pool-1-thread-5] Initializing /data/martin/tester.tif: [testng] [2024-05-12 01:25:23,549] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-05-12 01:25:23,729] [pool-1-thread-6] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-05-12 01:25:23,854] [pool-1-thread-9] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-05-12 01:25:24,017] [pool-1-thread-1] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-05-12 01:25:24,867] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-05-12 01:25:25,050] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] [2024-05-12 01:25:25,284] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-05-12 01:25:25,312] [pool-1-thread-8] Initializing /data/ascb/bad/FND-20_FawcettLongitudinalMidpieces_4800.tif: [testng] [2024-05-12 01:25:25,373] [pool-1-thread-11] Initializing /data/ascb/FND-22_FawcettLongitudinalMammalian_4800.tif: [testng] [2024-05-12 01:25:25,581] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-05-12 01:25:25,718] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] [2024-05-12 01:25:25,915] [pool-1-thread-6] Initializing /data/public/libtiff/strike.tif: [testng] [2024-05-12 01:25:26,182] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-05-12 01:25:26,290] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z056.tif: [testng] [2024-05-12 01:25:26,342] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-05-12 01:25:26,603] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-05-12 01:25:26,665] [pool-1-thread-7] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-05-12 01:25:26,773] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-05-12 01:25:26,817] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z013.tif: [testng] [2024-05-12 01:25:27,060] [pool-1-thread-12] Initializing /data/public/condensation/A6.pattern1.tif: [testng] [2024-05-12 01:25:27,167] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-05-12 01:25:27,249] [pool-1-thread-5] Initializing /data/curtis/test1.tiff: [testng] [2024-05-12 01:25:27,481] [pool-1-thread-7] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-05-12 01:25:27,776] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-05-12 01:25:27,828] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-05-12 01:25:28,002] [pool-1-thread-12] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-05-12 01:25:28,317] [pool-1-thread-6] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-05-12 01:25:28,653] [pool-1-thread-12] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-05-12 01:25:29,382] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-05-12 01:25:29,453] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-05-12 01:25:29,877] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-05-12 01:25:30,055] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0220.TIF: [testng] [2024-05-12 01:25:30,760] [pool-1-thread-3] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-05-12 01:25:30,984] [pool-1-thread-12] Initializing /data/wayne/northern-8bit.tif: [testng] [2024-05-12 01:25:31,041] [pool-1-thread-5] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] [2024-05-12 01:25:31,198] [pool-1-thread-6] Initializing /data/jae/Second image.tif: [testng] [2024-05-12 01:25:31,566] [pool-1-thread-12] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-05-12 01:25:31,839] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] [2024-05-12 01:25:31,867] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-05-12 01:25:32,053] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z043.tif: [testng] [2024-05-12 01:25:32,284] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-05-12 01:25:32,395] [pool-1-thread-5] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-05-12 01:25:32,516] [pool-1-thread-6] Initializing /data/lzw/BoutonVsAxon.tif: [testng] [2024-05-12 01:25:32,785] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-05-12 01:25:33,367] [pool-1-thread-2] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-05-12 01:25:33,443] [pool-1-thread-3] Initializing /data/josiah/cell-Z11.C1.tiff: [testng] [2024-05-12 01:25:33,510] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-05-12 01:25:33,793] [pool-1-thread-11] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-05-12 01:25:33,911] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-05-12 01:25:33,950] [pool-1-thread-3] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-05-12 01:25:34,131] [pool-1-thread-11] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-05-12 01:25:34,265] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0252.TIF: [testng] [2024-05-12 01:25:34,479] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-05-12 01:25:34,699] [pool-1-thread-11] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-05-12 01:25:34,933] [pool-1-thread-3] Initializing /data/tom-kazimiers/test_exiftool2_resave.tiff: [testng] [2024-05-12 01:25:34,990] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [2024-05-12 01:25:35,088] [pool-1-thread-2] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-05-12 01:25:37,873] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-05-12 01:25:37,937] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-05-12 01:25:38,042] [pool-1-thread-11] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-05-12 01:25:38,246] [pool-1-thread-6] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-05-12 01:25:38,337] [pool-1-thread-1] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-05-12 01:25:38,741] [pool-1-thread-12] Initializing /data/curtis/test2.tiff: [testng] [2024-05-12 01:25:38,821] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-05-12 01:25:38,864] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-05-12 01:25:38,928] [pool-1-thread-11] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-05-12 01:25:39,045] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-05-12 01:25:39,210] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-05-12 01:25:39,249] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-05-12 01:25:39,288] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z016.tif: [testng] [2024-05-12 01:25:39,392] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z010.tif: [testng] [2024-05-12 01:25:39,437] [pool-1-thread-11] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-05-12 01:25:39,591] [pool-1-thread-6] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-05-12 01:25:39,632] [pool-1-thread-3] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-05-12 01:25:40,868] [pool-1-thread-1] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-05-12 01:25:41,022] [pool-1-thread-12] Initializing /data/curtis/clown.tif: [testng] [2024-05-12 01:25:41,159] [pool-1-thread-11] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-05-12 01:25:41,321] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-05-12 01:25:41,348] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-05-12 01:25:41,654] [pool-1-thread-6] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-05-12 01:25:41,726] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-05-12 01:25:41,853] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z034.tif: [testng] [2024-05-12 01:25:42,096] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-05-12 01:25:42,277] [pool-1-thread-12] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-05-12 01:25:42,538] [pool-1-thread-6] Initializing /data/curtis/map/brown-fox: [testng] [2024-05-12 01:25:42,762] [pool-1-thread-6] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-05-12 01:25:42,820] [pool-1-thread-12] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-05-12 01:25:43,035] [pool-1-thread-1] Initializing /data/public/libtiff/quad-tile.tif: [testng] [2024-05-12 01:25:43,478] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-05-12 01:25:43,526] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-05-12 01:25:43,816] [pool-1-thread-6] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-05-12 01:25:46,506] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-05-12 01:25:47,005] [pool-1-thread-7] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-05-12 01:25:47,029] [pool-1-thread-1] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-05-12 01:25:47,082] [pool-1-thread-8] Initializing /data/ascb/CYT-90_PasolliMousePanoramic_4800.tif: [testng] [2024-05-12 01:25:47,158] [pool-1-thread-9] Initializing /data/damian/33m.tiff: [testng] [2024-05-12 01:25:47,333] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-05-12 01:25:47,655] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-05-12 01:25:47,670] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0213.TIF: [testng] [2024-05-12 01:25:47,720] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-05-12 01:25:47,942] [pool-1-thread-9] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-05-12 01:25:48,534] [pool-1-thread-9] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-05-12 01:25:48,594] [pool-1-thread-4] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-05-12 01:25:48,673] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 7 seconds Finished: SUCCESS