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Started by upstream project "BIOFORMATS-test-repo" build number 63 originally caused by: Started by upstream project "Trigger" build number 70 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1216763204863052899.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_9332_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:17,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:17,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:17,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:17,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:17,522 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:17,522 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:17,522 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:17,523 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:17,523 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@41a0aa7d - End of configuration. [testng] 01:20:17,524 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6574a52c - Registering current configuration as safe fallback point [testng] 01:20:17,524 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6c1a5b54 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 430 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-14 01:20:17,536] [main] java.version = 11.0.16 [testng] 01:20:17,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:17,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:17,719 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-14_01-20-17.log] [testng] 01:20:17,720 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-05-14 01:20:17,787] [main] testng.directory = /data [testng] [2024-05-14 01:20:17,788] [main] testng.configDirectory = /config [testng] [2024-05-14 01:20:17,867] [main] testng.multiplier = 1.0 [testng] [2024-05-14 01:20:17,869] [main] testng.in-memory = false [testng] [2024-05-14 01:20:17,869] [main] testng.allow-missing = false [testng] [2024-05-14 01:20:17,869] [main] user.language = en [testng] [2024-05-14 01:20:17,869] [main] user.country = ${user.country} [testng] [2024-05-14 01:20:17,869] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-14 01:20:33,204] [main] ---------------------------------------- [testng] [2024-05-14 01:20:33,204] [main] Total files: 283 [testng] [2024-05-14 01:20:33,204] [main] Scan time: 15.335 s (54 ms/file) [testng] [2024-05-14 01:20:33,205] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-14 01:28:36,870] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 01:28:36,871 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:28:36,871 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:36,874 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-14_01-28-36.log] [testng] 01:28:36,874 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73d299bf - End of configuration. [testng] [2024-05-14 01:28:37,330] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] 01:28:37,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:28:37,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,332 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-14_01-28-37.log] [testng] 01:28:37,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f427e93 - End of configuration. [testng] [2024-05-14 01:28:37,415] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 01:28:37,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:28:37,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-14_01-28-37.log] [testng] 01:28:37,416 |-INFO in ch.qos.logback.core.sift.SiftProcessor@bfba448 - End of configuration. [testng] [2024-05-14 01:28:37,580] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 01:28:37,580 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:28:37,580 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,581 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-14_01-28-37.log] [testng] 01:28:37,581 |-INFO in ch.qos.logback.core.sift.SiftProcessor@edd5b14 - End of configuration. [testng] [2024-05-14 01:28:37,655] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:28:37,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:28:37,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,656 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-14_01-28-37.log] [testng] 01:28:37,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5389b7f8 - End of configuration. [testng] [2024-05-14 01:28:37,681] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:28:37,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:28:37,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,682 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-14_01-28-37.log] [testng] 01:28:37,682 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35e0cc46 - End of configuration. [testng] [2024-05-14 01:28:37,736] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 01:28:37,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:28:37,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,737 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-14_01-28-37.log] [testng] 01:28:37,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12921138 - End of configuration. [testng] [2024-05-14 01:28:37,881] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] 01:28:37,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:28:37,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-14_01-28-37.log] [testng] 01:28:37,883 |-INFO in ch.qos.logback.core.sift.SiftProcessor@597f813c - End of configuration. [testng] [2024-05-14 01:28:37,964] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:28:37,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:28:37,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:37,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-14_01-28-37.log] [testng] 01:28:37,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a23561 - End of configuration. [testng] [2024-05-14 01:28:38,039] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 01:28:38,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:28:38,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:38,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-14_01-28-38.log] [testng] 01:28:38,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bb87595 - End of configuration. [testng] [2024-05-14 01:28:40,753] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] 01:28:40,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:28:40,753 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:40,754 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-14_01-28-40.log] [testng] 01:28:40,754 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5359411f - End of configuration. [testng] [2024-05-14 01:28:40,838] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 01:28:40,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:28:40,839 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:40,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-14_01-28-40.log] [testng] 01:28:40,840 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ef892d1 - End of configuration. [testng] [2024-05-14 01:28:43,525] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-05-14 01:28:43,579] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-05-14 01:28:43,690] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-05-14 01:28:43,783] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-05-14 01:28:43,918] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-05-14 01:28:43,992] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-05-14 01:28:44,044] [pool-1-thread-7] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-05-14 01:28:44,616] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-05-14 01:28:44,669] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-05-14 01:28:45,111] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-05-14 01:28:46,197] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-05-14 01:28:46,654] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-05-14 01:28:46,917] [pool-1-thread-12] Initializing /data/qa-17919/f10187.oir: [testng] [2024-05-14 01:29:05,483] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-05-14 01:29:05,850] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-05-14 01:29:05,910] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-05-14 01:29:05,999] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-05-14 01:29:06,061] [pool-1-thread-11] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-05-14 01:29:06,658] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-05-14 01:29:07,258] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi: [testng] [2024-05-14 01:29:07,427] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-05-14 01:29:07,589] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-05-14 01:29:07,738] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-05-14 01:29:08,069] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-05-14 01:29:08,122] [pool-1-thread-8] Initializing /data/qa-17270/stack1.oir: [testng] [2024-05-14 01:29:09,546] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-05-14 01:29:09,780] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-05-14 01:29:10,043] [pool-1-thread-2] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-05-14 01:29:14,709] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-05-14 01:29:14,788] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-05-14 01:29:15,170] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-05-14 01:29:15,335] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-05-14 01:29:15,952] [pool-1-thread-6] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-05-14 01:29:16,284] [pool-1-thread-7] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-05-14 01:29:16,448] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-05-14 01:29:16,513] [pool-1-thread-1] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-05-14 01:29:16,682] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-05-14 01:29:16,903] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-05-14 01:29:17,169] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-05-14 01:29:18,091] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-05-14 01:29:18,413] [pool-1-thread-11] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-05-14 01:29:18,851] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-05-14 01:29:19,020] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-05-14 01:29:21,150] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-05-14 01:29:21,362] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-05-14 01:29:21,875] [pool-1-thread-9] Initializing /data/olympus/XYZt.oir: [testng] [2024-05-14 01:29:23,420] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-05-14 01:29:23,505] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-05-14 01:29:23,747] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-05-14 01:29:24,486] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2024-05-14 01:29:24,533] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-05-14 01:29:24,664] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-05-14 01:29:24,811] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-05-14 01:29:24,872] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-05-14 01:29:24,996] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-05-14 01:29:25,773] [pool-1-thread-7] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-05-14 01:29:25,922] [pool-1-thread-6] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-05-14 01:29:26,131] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2024-05-14 01:29:26,246] [pool-1-thread-5] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-05-14 01:29:26,384] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-05-14 01:29:26,542] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-05-14 01:29:26,897] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-05-14 01:29:28,643] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-05-14 01:29:28,712] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-05-14 01:29:28,997] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-05-14 01:29:29,245] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-05-14 01:29:29,344] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-05-14 01:29:29,773] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-05-14 01:29:29,892] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-05-14 01:29:30,015] [pool-1-thread-7] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-05-14 01:29:30,798] [pool-1-thread-8] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-05-14 01:29:30,897] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-05-14 01:29:31,131] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-05-14 01:29:31,255] [pool-1-thread-6] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-05-14 01:29:31,394] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-05-14 01:29:31,936] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-05-14 01:29:32,892] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-05-14 01:29:33,190] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-05-14 01:29:34,052] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-05-14 01:29:34,093] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-05-14 01:29:34,345] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-05-14 01:29:35,105] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-05-14 01:29:39,131] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-05-14 01:29:39,208] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-05-14 01:29:39,476] [pool-1-thread-5] Initializing 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[2024-05-14 01:29:43,376] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-05-14 01:29:43,543] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-05-14 01:29:43,773] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-05-14 01:29:43,920] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-05-14 01:29:46,063] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-05-14 01:29:46,679] [pool-1-thread-7] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-05-14 01:30:31,084] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-05-14 01:30:31,411] [pool-1-thread-5] Initializing 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/data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-05-14 01:30:51,445] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-05-14 01:30:52,006] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2024-05-14 01:30:52,098] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-05-14 01:30:52,568] [pool-1-thread-6] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-05-14 01:30:53,102] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-05-14 01:30:53,430] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-05-14 01:30:53,612] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-05-14 01:30:54,121] [pool-1-thread-8] Initializing /data/qa-17917/f10010.oir: [testng] [2024-05-14 01:31:18,325] [pool-1-thread-3] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-05-14 01:31:19,082] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-05-14 01:31:19,280] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-05-14 01:31:19,344] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-05-14 01:31:20,532] [pool-1-thread-11] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-05-14 01:31:20,723] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-05-14 01:31:20,875] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-05-14 01:31:21,991] [pool-1-thread-4] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-05-14 01:31:22,061] [pool-1-thread-2] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-05-14 01:31:22,421] [pool-1-thread-1] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-05-14 01:31:23,443] [pool-1-thread-11] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-05-14 01:31:23,522] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-05-14 01:31:23,989] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-05-14 01:31:24,459] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-05-14 01:31:24,749] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-05-14 01:31:25,302] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-05-14 01:31:25,421] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-05-14 01:31:26,560] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-05-14 01:31:26,620] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-05-14 01:31:26,668] [pool-1-thread-1] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-05-14 01:31:27,848] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-05-14 01:31:27,984] [pool-1-thread-11] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-05-14 01:31:28,027] [pool-1-thread-6] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-05-14 01:31:29,586] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-05-14 01:31:29,779] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-05-14 01:31:29,989] [pool-1-thread-11] Initializing /data/qa-17335/1.oir: [testng] [2024-05-14 01:31:30,164] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-05-14 01:31:30,644] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-05-14 01:31:30,862] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-05-14 01:31:30,942] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-05-14 01:31:31,830] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-05-14 01:31:32,059] [pool-1-thread-2] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-05-14 01:31:32,132] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-05-14 01:31:32,335] [pool-1-thread-10] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-05-14 01:31:33,021] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-05-14 01:31:33,080] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-05-14 01:31:33,293] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-05-14 01:31:33,480] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-05-14 01:31:34,106] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-05-14 01:31:34,269] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-05-14 01:31:34,484] [pool-1-thread-1] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-05-14 01:31:34,839] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-05-14 01:31:35,485] [pool-1-thread-4] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-05-14 01:31:36,071] [pool-1-thread-1] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-05-14 01:31:36,124] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-05-14 01:31:36,594] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-05-14 01:31:36,849] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-05-14 01:31:37,446] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-05-14 01:31:38,384] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-05-14 01:31:38,629] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-05-14 01:31:38,715] [pool-1-thread-1] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-05-14 01:31:38,854] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-05-14 01:31:39,330] [pool-1-thread-4] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-05-14 01:31:44,082] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-05-14 01:31:44,475] [pool-1-thread-6] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-05-14 01:31:44,514] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-05-14 01:31:44,620] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 43 minutes 1 second Finished: SUCCESS