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Started by upstream project "BIOFORMATS-test-repo" build number 65 originally caused by: Started by upstream project "Trigger" build number 72 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins9593167060649046741.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_9661_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:34,048 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:34,050 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 01:21:34,050 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:34,051 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:34,051 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:34,052 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:34,052 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:34,052 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:34,053 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:34,053 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:34,054 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:34,054 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:34,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:34,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:34,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:34,328 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:34,334 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:34,334 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:34,335 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:34,335 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:34,335 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 01:21:34,336 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 01:21:34,336 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 283 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-16 01:21:34,345] [main] java.version = 21 [testng] 01:21:34,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:34,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:34,392 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-16_01-21-34.log] [testng] 01:21:34,394 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-05-16 01:21:34,395] [main] testng.directory = /data [testng] [2024-05-16 01:21:34,396] [main] testng.configDirectory = /config [testng] [2024-05-16 01:21:34,405] [main] testng.multiplier = 1.0 [testng] [2024-05-16 01:21:34,406] [main] testng.in-memory = false [testng] [2024-05-16 01:21:34,406] [main] testng.allow-missing = false [testng] [2024-05-16 01:21:34,406] [main] user.language = en [testng] [2024-05-16 01:21:34,406] [main] user.country = ${user.country} [testng] [2024-05-16 01:21:34,406] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-16 01:21:43,333] [main] ---------------------------------------- [testng] [2024-05-16 01:21:43,334] [main] Total files: 4424 [testng] [2024-05-16 01:21:43,334] [main] Scan time: 8.927 s (2 ms/file) [testng] [2024-05-16 01:21:43,335] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-16 01:23:29,174] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] 01:23:29,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:29,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,176 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-16_01-23-29.log] [testng] 01:23:29,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a033b20 - End of configuration. [testng] [2024-05-16 01:23:29,206] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] 01:23:29,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:29,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,207 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-16_01-23-29.log] [testng] 01:23:29,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e763b18 - End of configuration. [testng] [2024-05-16 01:23:29,234] [pool-1-thread-11] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] 01:23:29,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:29,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,235 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-16_01-23-29.log] [testng] 01:23:29,235 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d2316cd - End of configuration. [testng] [2024-05-16 01:23:29,254] [pool-1-thread-10] Initializing /data/ascb/CYT-55_HowellGolgiRibbonOutlined_4800.tif: [testng] 01:23:29,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:29,254 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-16_01-23-29.log] [testng] 01:23:29,255 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49c3dccb - End of configuration. [testng] [2024-05-16 01:23:29,303] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] 01:23:29,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:29,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,304 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-16_01-23-29.log] [testng] 01:23:29,304 |-INFO in ch.qos.logback.core.sift.SiftProcessor@488be3a7 - End of configuration. [testng] [2024-05-16 01:23:29,323] [pool-1-thread-8] Initializing /data/misc/mri.eps: [testng] 01:23:29,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:29,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-16_01-23-29.log] [testng] 01:23:29,324 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2106ca5f - End of configuration. [testng] [2024-05-16 01:23:29,363] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z035.tif: [testng] 01:23:29,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:29,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,364 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-16_01-23-29.log] [testng] 01:23:29,364 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a8d60c2 - End of configuration. [testng] [2024-05-16 01:23:29,388] [pool-1-thread-6] Initializing /data/josiah/cell-Z27.C1.tiff: [testng] 01:23:29,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:29,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,388 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-16_01-23-29.log] [testng] 01:23:29,389 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fbc1ecc - End of configuration. [testng] [2024-05-16 01:23:29,414] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] 01:23:29,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:29,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,415 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-16_01-23-29.log] [testng] 01:23:29,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@103a2b4d - End of configuration. [testng] [2024-05-16 01:23:29,438] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] 01:23:29,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:29,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-16_01-23-29.log] [testng] 01:23:29,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@293377ae - End of configuration. [testng] [2024-05-16 01:23:29,463] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] 01:23:29,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:29,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-16_01-23-29.log] [testng] 01:23:29,464 |-INFO in ch.qos.logback.core.sift.SiftProcessor@172ce0 - End of configuration. [testng] [2024-05-16 01:23:29,488] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] 01:23:29,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:29,489 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:29,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-16_01-23-29.log] [testng] 01:23:29,489 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42774bb2 - End of configuration. [testng] [2024-05-16 01:23:30,826] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-05-16 01:23:30,876] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-05-16 01:23:31,338] [pool-1-thread-8] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-05-16 01:23:31,410] [pool-1-thread-1] Initializing /data/samples/melissa/strike-uncompressed.tiff: [testng] [2024-05-16 01:23:31,432] [pool-1-thread-2] Initializing /data/josiah/cell-Z16.C0.tiff: [testng] [2024-05-16 01:23:31,460] [pool-1-thread-5] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-05-16 01:23:33,549] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-05-16 01:23:33,619] [pool-1-thread-11] Initializing /data/curtis/map/jumps-over: [testng] [2024-05-16 01:23:33,650] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z062.tif: [testng] [2024-05-16 01:23:33,669] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z015.tif: [testng] [2024-05-16 01:23:33,688] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-05-16 01:23:34,514] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z045.tif: [testng] [2024-05-16 01:23:34,555] [pool-1-thread-1] Initializing /data/damian/06m.tiff: [testng] [2024-05-16 01:23:34,628] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-05-16 01:23:34,661] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0211.TIF: [testng] [2024-05-16 01:23:34,747] [pool-1-thread-6] Initializing /data/lee/r03c03f01p01rc2-ch1sk1fk1fl1.tiff: [testng] [2024-05-16 01:23:34,954] [pool-1-thread-9] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-05-16 01:23:34,998] [pool-1-thread-4] Initializing /data/damian/21m.tiff: [testng] [2024-05-16 01:23:35,043] [pool-1-thread-2] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] [2024-05-16 01:23:35,503] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z031.tif: [testng] [2024-05-16 01:23:35,544] [pool-1-thread-3] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-05-16 01:23:35,593] [pool-1-thread-12] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-05-16 01:23:35,898] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-05-16 01:23:35,941] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0254.TIF: [testng] [2024-05-16 01:23:35,983] [pool-1-thread-9] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-05-16 01:23:36,293] [pool-1-thread-11] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-05-16 01:23:36,346] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-05-16 01:23:36,396] [pool-1-thread-3] Initializing /data/damian/33m.tiff: [testng] [2024-05-16 01:23:37,163] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-05-16 01:23:37,182] [pool-1-thread-3] Initializing /data/ascb/CYT-35_FriendOsmiumEpididymis_4800.tif: [testng] [2024-05-16 01:23:37,226] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-05-16 01:23:37,300] [pool-1-thread-11] Initializing /data/brian/CurrentSystems.tiff: [testng] [2024-05-16 01:23:37,501] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z014.tif: [testng] [2024-05-16 01:23:37,608] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x48.tiff: [testng] [2024-05-16 01:23:37,656] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-05-16 01:23:37,767] [pool-1-thread-7] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-05-16 01:23:37,960] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-05-16 01:23:38,054] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z030.tif: [testng] [2024-05-16 01:23:38,185] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] [2024-05-16 01:23:38,374] [pool-1-thread-12] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-05-16 01:23:38,428] [pool-1-thread-6] Initializing /data/public/libtiff/dscf0013.tif: [testng] [2024-05-16 01:23:38,475] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x32.tiff: [testng] [2024-05-16 01:23:38,626] [pool-1-thread-10] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-05-16 01:23:38,669] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] [2024-05-16 01:23:38,865] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-05-16 01:23:38,918] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-05-16 01:23:39,013] [pool-1-thread-12] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-05-16 01:23:39,193] 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[testng] [2024-05-16 01:25:07,057] [pool-1-thread-6] Initializing /data/misc/mri-new.mov: [testng] [2024-05-16 01:25:07,282] [pool-1-thread-9] Initializing /data/damian/24m.tiff: [testng] [2024-05-16 01:25:07,425] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-05-16 01:25:07,458] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] [2024-05-16 01:25:07,503] [pool-1-thread-11] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-05-16 01:25:07,632] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-05-16 01:25:07,682] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-05-16 01:25:07,718] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-05-16 01:25:07,933] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] [2024-05-16 01:25:07,973] [pool-1-thread-6] Initializing 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[pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z008.tif: [testng] [2024-05-16 01:25:35,812] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-05-16 01:25:36,214] [pool-1-thread-3] Initializing /data/ascb/FND-26a_PaladeGlycogenLabeled_4800.tif: [testng] [2024-05-16 01:25:38,580] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-05-16 01:25:38,663] [pool-1-thread-5] Initializing /data/chris-wood/15ms full low light.tif: [testng] [2024-05-16 01:25:38,879] [pool-1-thread-6] Initializing /data/wayne/Rockies-grayscale.tif: [testng] [2024-05-16 01:25:39,208] [pool-1-thread-10] Initializing /data/michael/MFISH.tiff: [testng] [2024-05-16 01:25:39,360] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z063.tif: [testng] [2024-05-16 01:25:39,605] [pool-1-thread-6] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-05-16 01:25:39,778] [pool-1-thread-11] Initializing 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[pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-05-16 01:25:42,188] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-05-16 01:25:42,224] [pool-1-thread-7] Initializing /data/lzw/DendriteForks.tif: [testng] [2024-05-16 01:25:42,598] [pool-1-thread-10] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-05-16 01:25:42,652] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z037.tif: [testng] [2024-05-16 01:25:42,747] [pool-1-thread-5] Initializing /data/tamjid/Image_843.tif: [testng] [2024-05-16 01:25:42,957] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] [2024-05-16 01:25:43,098] [pool-1-thread-10] Initializing /data/curtis/images24.tiff: [testng] [2024-05-16 01:25:43,276] [pool-1-thread-11] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-05-16 01:25:43,540] [pool-1-thread-8] Initializing 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01:25:45,709] [pool-1-thread-8] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-05-16 01:25:46,067] [pool-1-thread-1] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-05-16 01:25:46,227] [pool-1-thread-8] Initializing /data/curtis/test2.tiff: [testng] [2024-05-16 01:25:46,280] [pool-1-thread-6] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-05-16 01:25:46,658] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-05-16 01:25:46,850] [pool-1-thread-1] Initializing /data/josiah/cell-Z15.C0.tiff: [testng] [2024-05-16 01:25:47,464] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-05-16 01:25:47,844] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-05-16 01:25:47,991] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-05-16 01:25:48,059] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z011.tif: [testng] [2024-05-16 01:25:48,181] [pool-1-thread-4] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] [2024-05-16 01:25:48,479] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-05-16 01:25:48,551] [pool-1-thread-8] Initializing /data/josiah/cell-Z37.C1.tiff: [testng] [2024-05-16 01:25:48,663] [pool-1-thread-1] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-05-16 01:25:49,046] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x48.tiff: [testng] [2024-05-16 01:25:49,115] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-05-16 01:25:49,331] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-05-16 01:25:49,529] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-05-16 01:25:49,873] [pool-1-thread-9] Initializing /data/martin/head.tif: [testng] [2024-05-16 01:25:50,048] [pool-1-thread-6] Initializing /data/ascb/CYT-2_BaintonBoylesPhagocytosisYeastB_4800.tif: [testng] [2024-05-16 01:25:50,094] [pool-1-thread-2] Initializing /data/kevino/_BF_00002.tif: [testng] [2024-05-16 01:25:50,159] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-64.tiff: [testng] [2024-05-16 01:25:50,372] [pool-1-thread-1] Initializing /data/josiah/cell-Z25.C1.tiff: [testng] [2024-05-16 01:25:50,463] [pool-1-thread-9] Initializing /data/josiah/cell-Z3.C1.tiff: [testng] [2024-05-16 01:25:50,606] [pool-1-thread-8] Initializing /data/josiah/cell-Z32.C0.tiff: [testng] [2024-05-16 01:25:50,730] [pool-1-thread-7] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-05-16 01:25:50,794] [pool-1-thread-2] Initializing /data/marc/ball48_original_10x.tif: [testng] [2024-05-16 01:25:50,844] [pool-1-thread-10] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-05-16 01:25:52,735] [pool-1-thread-1] Initializing 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01:25:54,401] [pool-1-thread-1] Initializing /data/public/condensation/A6.pattern2.tif: [testng] [2024-05-16 01:25:54,619] [pool-1-thread-7] Initializing /data/paulh/quickpollen4_w1_t1.tif: [testng] [2024-05-16 01:25:54,816] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-05-16 01:25:54,904] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0256.TIF: [testng] [2024-05-16 01:25:55,006] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-05-16 01:25:55,090] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z035.tif: [testng] [2024-05-16 01:25:55,128] [pool-1-thread-11] Initializing /data/josiah/cell-Z9.C1.tiff: [testng] [2024-05-16 01:25:55,248] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z058.tif: [testng] [2024-05-16 01:25:55,299] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-05-16 01:25:55,358] [pool-1-thread-9] Initializing /data/public/libtiff/caspian.tif: [testng] [2024-05-16 01:25:55,423] [pool-1-thread-5] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-05-16 01:25:55,612] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z003.tif: [testng] [2024-05-16 01:25:55,637] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-05-16 01:25:55,654] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] [2024-05-16 01:25:55,688] [pool-1-thread-2] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-05-16 01:25:56,448] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0213.TIF: [testng] [2024-05-16 01:25:56,692] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-05-16 01:25:56,754] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z033.tif: [testng] [2024-05-16 01:25:56,785] [pool-1-thread-7] Initializing 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01:25:57,865] [pool-1-thread-9] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-05-16 01:25:57,964] [pool-1-thread-7] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-05-16 01:25:58,111] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-05-16 01:25:58,193] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-05-16 01:25:58,442] [pool-1-thread-7] Initializing /data/kevino/_BF_00005.tif: [testng] [2024-05-16 01:25:58,532] [pool-1-thread-6] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-05-16 01:25:58,994] [pool-1-thread-5] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-05-16 01:25:59,129] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-05-16 01:25:59,367] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-05-16 01:25:59,480] [pool-1-thread-7] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-05-16 01:25:59,513] [pool-1-thread-11] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-05-16 01:25:59,564] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z004.tif: [testng] [2024-05-16 01:25:59,736] [pool-1-thread-9] Initializing /data/misc/mri-old.mov: [testng] [2024-05-16 01:25:59,948] [pool-1-thread-5] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-05-16 01:26:00,238] [pool-1-thread-9] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-05-16 01:26:00,339] [pool-1-thread-7] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-05-16 01:26:00,383] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-05-16 01:26:00,651] [pool-1-thread-12] Initializing /data/josiah/cell-Z22.C0.tiff: [testng] [2024-05-16 01:26:00,688] [pool-1-thread-5] Initializing /data/julien/MarjorieCoisy1.TIF: [testng] [2024-05-16 01:26:00,729] [pool-1-thread-9] Initializing /data/misc/wtembryo.tiff: [testng] [2024-05-16 01:26:00,782] [pool-1-thread-7] Initializing /data/wayne/northern-8bit.tif: [testng] [2024-05-16 01:26:01,036] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-05-16 01:26:01,185] [pool-1-thread-12] Initializing /data/jcb/SuppFig5D.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 4 minutes 54 seconds Finished: SUCCESS