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Started by upstream project "BIOFORMATS-test-repo" build number 65 originally caused by: Started by upstream project "Trigger" build number 72 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins18188660163650400609.sh + '[' apng = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_9776_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 02:20:56,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:20:56,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:20:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:20:56,673 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:20:56,680 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:20:56,680 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:20:56,681 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:20:56,681 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:20:56,681 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@428640fa - End of configuration. [testng] 02:20:56,682 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6bd61f98 - Registering current configuration as safe fallback point [testng] 02:20:56,682 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48aca48b - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 497 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-16 02:20:56,694] [main] java.version = 21 [testng] 02:20:56,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:20:56,698 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:56,744 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-16_02-20-56.log] [testng] 02:20:56,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-05-16 02:20:56,748] [main] testng.directory = /data [testng] [2024-05-16 02:20:56,748] [main] testng.configDirectory = /config [testng] [2024-05-16 02:20:56,766] [main] testng.multiplier = 1.0 [testng] [2024-05-16 02:20:56,794] [main] testng.in-memory = false [testng] [2024-05-16 02:20:56,794] [main] testng.allow-missing = false [testng] [2024-05-16 02:20:56,794] [main] user.language = en [testng] [2024-05-16 02:20:56,794] [main] user.country = ${user.country} [testng] [2024-05-16 02:20:56,794] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-16 02:20:57,416] [main] ---------------------------------------- [testng] [2024-05-16 02:20:57,416] [main] Total files: 21 [testng] [2024-05-16 02:20:57,417] [main] Scan time: 0.622 s (29 ms/file) [testng] [2024-05-16 02:20:57,417] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-16 02:20:58,630] [pool-1-thread-1] Initializing /data/samples/william_wong05.png: [testng] 02:20:58,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:20:58,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,633 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-16_02-20-58.log] [testng] 02:20:58,633 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4422e6f7 - End of configuration. [testng] [2024-05-16 02:20:58,651] [pool-1-thread-12] Initializing /data/samples/daniel_coltri_two.png: [testng] 02:20:58,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:20:58,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,653 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-16_02-20-58.log] [testng] 02:20:58,653 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65393c1e - End of configuration. [testng] [2024-05-16 02:20:58,661] [pool-1-thread-11] Initializing /data/samples/MoonPhases.png: [testng] 02:20:58,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:20:58,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-16_02-20-58.log] [testng] 02:20:58,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f70ee79 - End of configuration. [testng] [2024-05-16 02:20:58,683] [pool-1-thread-10] Initializing /data/samples/william_wong04.png: [testng] 02:20:58,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:20:58,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-16_02-20-58.log] [testng] 02:20:58,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@295b1d23 - End of configuration. [testng] [2024-05-16 02:20:58,692] [pool-1-thread-9] Initializing /data/samples/Matrix.png: [testng] 02:20:58,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:20:58,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-16_02-20-58.log] [testng] 02:20:58,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b57420a - End of configuration. [testng] [2024-05-16 02:20:58,703] [pool-1-thread-8] Initializing /data/samples/orbit.png: [testng] 02:20:58,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:20:58,703 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,704 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-16_02-20-58.log] [testng] 02:20:58,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a27eab2 - End of configuration. [testng] [2024-05-16 02:20:58,713] [pool-1-thread-7] Initializing /data/samples/monkey_apng.png: [testng] 02:20:58,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:20:58,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,715 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-16_02-20-58.log] [testng] 02:20:58,715 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a126add - End of configuration. [testng] [2024-05-16 02:20:58,725] [pool-1-thread-6] Initializing /data/samples/william_wong02.png: [testng] 02:20:58,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:20:58,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-16_02-20-58.log] [testng] 02:20:58,727 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40fa55b7 - End of configuration. [testng] [2024-05-16 02:20:58,739] [pool-1-thread-5] Initializing /data/qa-7473/n.tif: [testng] 02:20:58,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:20:58,740 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,741 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-16_02-20-58.log] [testng] 02:20:58,742 |-INFO in ch.qos.logback.core.sift.SiftProcessor@590dbcd2 - End of configuration. [testng] [2024-05-16 02:20:58,781] [pool-1-thread-4] Initializing /data/samples/chompy2.png: [testng] 02:20:58,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:20:58,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,782 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-16_02-20-58.log] [testng] 02:20:58,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@776939b7 - End of configuration. [testng] [2024-05-16 02:20:58,789] [pool-1-thread-3] Initializing /data/samples/spinfox.png: [testng] 02:20:58,789 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:20:58,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,790 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-16_02-20-58.log] [testng] 02:20:58,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cf38e67 - End of configuration. [testng] [2024-05-16 02:20:58,798] [pool-1-thread-2] Initializing /data/samples/joanna_viera01.png: [testng] 02:20:58,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:20:58,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:20:58,800 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-16_02-20-58.log] [testng] 02:20:58,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62064384 - End of configuration. [testng] [2024-05-16 02:21:00,135] [pool-1-thread-2] Initializing /data/samples/phug_logo.png: [testng] [2024-05-16 02:21:00,157] [pool-1-thread-1] Initializing /data/qa-7473/x.png: [testng] [2024-05-16 02:21:00,163] [pool-1-thread-12] Initializing /data/samples/atom.png: [testng] [2024-05-16 02:21:00,443] [pool-1-thread-4] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-05-16 02:21:00,455] [pool-1-thread-3] Initializing /data/samples/daniel_coltri_one.png: [testng] [2024-05-16 02:21:00,465] [pool-1-thread-6] Initializing /data/colin/test.sfstdge.png: [testng] [2024-05-16 02:21:00,471] [pool-1-thread-8] Initializing /data/samples/Sun.png: [testng] [2024-05-16 02:21:00,762] [pool-1-thread-9] Initializing /data/samples/StarV838.png: [testng] [2024-05-16 02:21:00,767] [pool-1-thread-12] Initializing /data/samples/william_wong01.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 9 seconds Finished: SUCCESS