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Started by upstream project "BIOFORMATS-test-repo" build number 66 originally caused by: Started by upstream project "Trigger" build number 74 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins12503643403569163796.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_9816_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 07:53:06,853 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 07:53:06,855 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 07:53:06,856 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 07:53:06,857 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 07:53:06,857 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 07:53:06,857 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 07:53:06,858 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 07:53:06,858 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 07:53:06,859 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 07:53:06,859 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 07:53:06,859 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 07:53:06,859 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 07:53:07,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 07:53:07,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 07:53:07,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 07:53:07,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 07:53:07,190 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 07:53:07,190 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 07:53:07,190 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 07:53:07,191 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 07:53:07,191 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 07:53:07,192 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 07:53:07,192 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 333 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-17 07:53:07,202] [main] java.version = 1.8.0_342 [testng] 07:53:07,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:53:07,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:07,259 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-17_07-53-07.log] [testng] 07:53:07,261 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-05-17 07:53:07,263] [main] testng.directory = /data [testng] [2024-05-17 07:53:07,263] [main] testng.configDirectory = /config [testng] [2024-05-17 07:53:07,276] [main] testng.multiplier = 1.0 [testng] [2024-05-17 07:53:07,277] [main] testng.in-memory = false [testng] [2024-05-17 07:53:07,277] [main] testng.allow-missing = false [testng] [2024-05-17 07:53:07,277] [main] user.language = en [testng] [2024-05-17 07:53:07,277] [main] user.country = ${user.country} [testng] [2024-05-17 07:53:07,277] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-05-17 07:53:08,294] [main] ---------------------------------------- [testng] [2024-05-17 07:53:08,294] [main] Total files: 103 [testng] [2024-05-17 07:53:08,294] [main] Scan time: 1.017 s (9 ms/file) [testng] [2024-05-17 07:53:08,294] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-17 07:53:16,617] [pool-1-thread-1] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] 07:53:16,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 07:53:16,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,619 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-17_07-53-16.log] [testng] 07:53:16,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fd1c4a9 - End of configuration. [testng] [2024-05-17 07:53:16,650] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 07:53:16,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 07:53:16,650 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,652 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-17_07-53-16.log] [testng] 07:53:16,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a684e82 - End of configuration. [testng] [2024-05-17 07:53:16,683] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3: [testng] 07:53:16,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 07:53:16,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,684 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-17_07-53-16.log] [testng] 07:53:16,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ce8951c - End of configuration. [testng] [2024-05-17 07:53:16,699] [pool-1-thread-10] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 07:53:16,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 07:53:16,699 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,700 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-17_07-53-16.log] [testng] 07:53:16,700 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27570c04 - End of configuration. [testng] [2024-05-17 07:53:16,726] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 07:53:16,727 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 07:53:16,727 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,728 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-17_07-53-16.log] [testng] 07:53:16,745 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19074fd2 - End of configuration. [testng] [2024-05-17 07:53:16,798] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] 07:53:16,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 07:53:16,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,799 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-17_07-53-16.log] [testng] 07:53:16,799 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57f68ed9 - End of configuration. [testng] [2024-05-17 07:53:16,855] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] 07:53:16,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 07:53:16,855 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,856 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-17_07-53-16.log] [testng] 07:53:16,856 |-INFO in ch.qos.logback.core.sift.SiftProcessor@539a1df8 - End of configuration. [testng] [2024-05-17 07:53:16,929] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 07:53:16,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 07:53:16,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:16,930 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-17_07-53-16.log] [testng] 07:53:16,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@451b92fa - End of configuration. [testng] [2024-05-17 07:53:17,035] [pool-1-thread-5] Initializing /data/jay/recAmaghi.dm3: [testng] 07:53:17,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 07:53:17,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:17,036 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-17_07-53-17.log] [testng] 07:53:17,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26e13217 - End of configuration. [testng] [2024-05-17 07:53:17,067] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 07:53:17,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 07:53:17,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:17,068 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-17_07-53-17.log] [testng] 07:53:17,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c7bef80 - End of configuration. [testng] [2024-05-17 07:53:17,096] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.tif: [testng] 07:53:17,096 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 07:53:17,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:17,097 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-17_07-53-17.log] [testng] 07:53:17,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13aef183 - End of configuration. [testng] [2024-05-17 07:53:17,151] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] 07:53:17,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 07:53:17,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:53:17,152 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-17_07-53-17.log] [testng] 07:53:17,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@113b87c4 - End of configuration. [testng] [2024-05-17 07:53:21,029] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-05-17 07:53:21,078] [pool-1-thread-3] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-17 07:53:21,313] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-05-17 07:53:21,548] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-05-17 07:53:22,293] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-05-17 07:53:22,490] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-05-17 07:53:23,106] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-05-17 07:53:23,608] [pool-1-thread-4] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-05-17 07:53:23,742] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-05-17 07:53:23,890] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-05-17 07:53:24,029] [pool-1-thread-6] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-05-17 07:53:24,049] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-05-17 07:53:24,357] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-05-17 07:53:27,067] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-05-17 07:53:27,456] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-05-17 07:53:27,519] [pool-1-thread-5] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-05-17 07:53:28,909] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-05-17 07:53:29,794] [pool-1-thread-10] Initializing /data/qa-7642/8.dm4: [testng] [2024-05-17 07:53:31,166] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-05-17 07:53:31,224] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-05-17 07:53:31,298] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-05-17 07:53:31,965] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-05-17 07:53:32,077] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-05-17 07:53:32,086] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-05-17 07:53:33,935] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-05-17 07:53:34,744] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-05-17 07:53:35,061] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-05-17 07:53:35,689] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-05-17 07:53:36,062] [pool-1-thread-7] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-05-17 07:53:36,684] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-05-17 07:53:36,717] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-17 07:53:36,895] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-05-17 07:53:37,757] [pool-1-thread-4] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-05-17 07:53:38,311] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-05-17 07:53:39,256] [pool-1-thread-5] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-05-17 07:53:39,339] [pool-1-thread-6] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-17 07:53:39,624] [pool-1-thread-7] Initializing /data/samples/test-tiles.dm3: [testng] [2024-05-17 07:53:40,283] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-05-17 07:53:41,664] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-05-17 07:53:43,438] [pool-1-thread-3] Initializing /data/jay/dnasample1.dm3: [testng] [2024-05-17 07:53:43,875] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-05-17 07:53:44,614] [pool-1-thread-4] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-05-17 07:53:46,799] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-05-17 07:53:46,853] [pool-1-thread-2] Initializing /data/jay/dnasample.tif: [testng] [2024-05-17 07:53:49,119] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-05-17 07:53:49,219] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-05-17 07:53:49,226] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-05-17 07:53:50,466] [pool-1-thread-12] Initializing /data/qa-21761/example.dm4: [testng] [2024-05-17 07:53:50,528] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-05-17 07:53:50,637] [pool-1-thread-3] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-05-17 07:53:50,743] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-05-17 07:53:50,871] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-05-17 07:53:51,517] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-05-17 07:53:51,691] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-05-17 07:53:52,255] [pool-1-thread-10] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-05-17 07:53:52,977] [pool-1-thread-9] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-05-17 07:53:53,462] [pool-1-thread-3] Initializing /data/jay/DMtest.dm3: [testng] [2024-05-17 07:53:53,936] [pool-1-thread-5] Initializing /data/jay/DMtest2.dm3: [testng] [2024-05-17 07:53:53,956] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-05-17 07:53:54,118] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-05-17 07:53:54,510] [pool-1-thread-12] Initializing /data/jay/camtest1.dm3: [testng] [2024-05-17 07:53:54,598] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-05-17 07:53:54,689] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-05-17 07:53:55,088] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-05-17 07:53:55,560] [pool-1-thread-8] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-05-17 07:53:55,796] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-05-17 07:53:55,984] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-05-17 07:53:56,410] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-05-17 07:53:56,617] [pool-1-thread-2] Initializing /data/ofra/lowloss.dm3: [testng] [2024-05-17 07:53:56,805] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-05-17 07:53:56,952] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-05-17 07:53:57,296] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-05-17 07:53:57,340] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-05-17 07:53:57,708] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-05-17 07:53:57,715] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-05-17 07:53:58,469] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-05-17 07:53:59,239] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-05-17 07:53:59,506] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-05-17 07:53:59,606] [pool-1-thread-12] Initializing /data/melissa/annotation-test.tif: [testng] [2024-05-17 07:53:59,905] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-05-17 07:53:59,990] [pool-1-thread-12] Initializing /data/jay/smallerfile.dm3: [testng] [2024-05-17 07:54:00,067] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-05-17 07:54:00,453] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-05-17 07:54:00,467] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-05-17 07:54:00,746] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-05-17 07:54:00,969] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 15 seconds Finished: SUCCESS