Started by upstream project "Trigger" build number 164 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-build-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-build-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 19f38808b37ab8d6b17ea425d13e9d97c8f3f782 (refs/remotes/origin/master) Commit message: "Merge pull request #265 from ome/dependabot/submodules/omero-model-f544fae" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-build.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-build.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-build.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 19f38808b37ab8d6b17ea425d13e9d97c8f3f782 # timeout=10 > git rev-list --no-walk b332e8fb1dc0cccd0a9488648ec6f25c3432ef7b # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-model.url # timeout=10 > git config -f .gitmodules --get submodule.omero-model.path # timeout=10 > git config --get submodule.omero-common.url # timeout=10 > git config -f .gitmodules --get submodule.omero-common.path # timeout=10 > git config --get submodule.omero-romio.url # timeout=10 > git config -f .gitmodules --get submodule.omero-romio.path # timeout=10 > git config --get submodule.omero-renderer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-renderer.path # timeout=10 > git config --get submodule.omero-server.url # timeout=10 > git config -f .gitmodules --get submodule.omero-server.path # timeout=10 > git config --get submodule.omero-blitz.url # timeout=10 > git config -f .gitmodules --get submodule.omero-blitz.path # timeout=10 > git config --get submodule.omero-gateway-java.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gateway-java.path # timeout=10 > git config --get submodule.omero-zarr-pixel-buffer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-zarr-pixel-buffer.path # timeout=10 > git submodule update --init --recursive omero-model # timeout=10 > git submodule update --init --recursive omero-common # timeout=10 > git submodule update --init --recursive omero-romio # timeout=10 ERROR: Checkout failed hudson.plugins.git.GitException: Command "git submodule update --init --recursive omero-zarr-pixel-buffer" returned status code 1: stdout: stderr: error: pathspec 'omero-zarr-pixel-buffer' did not match any file(s) known to git at org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandIn(CliGitAPIImpl.java:2864) at org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandWithCredentials(CliGitAPIImpl.java:2204) at org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.lambda$execute$0(CliGitAPIImpl.java:1579) at com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:128) at com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:74) at com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:80) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at com.google.common.util.concurrent.DirectExecutorService.execute(DirectExecutorService.java:52) at java.base/java.util.concurrent.ExecutorCompletionService.submit(ExecutorCompletionService.java:184) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.submitRemainingCommand(GitCommandsExecutor.java:77) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:70) Also: hudson.remoting.Channel$CallSiteStackTrace: Remote call to JNLP4-connect connection from devspace-testintegration-1.devspace_omero-network/172.18.0.12:48676 at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1916) at hudson.remoting.UserRequest$ExceptionResponse.retrieve(UserRequest.java:384) at hudson.remoting.Channel.call(Channel.java:1108) at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.execute(RemoteGitImpl.java:155) at java.base/jdk.internal.reflect.DirectMethodHandleAccessor.invoke(Unknown Source) at java.base/java.lang.reflect.Method.invoke(Unknown Source) at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.invoke(RemoteGitImpl.java:140) at PluginClassLoader for git-client/jdk.proxy89/jdk.proxy89.$Proxy185.execute(Unknown Source) at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:196) at PluginClassLoader for git//hudson.plugins.git.GitSCM._checkout(GitSCM.java:1395) at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1277) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep.checkout(SCMStep.java:136) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:101) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:88) at PluginClassLoader for workflow-step-api//org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution.lambda$start$0(SynchronousNonBlockingStepExecution.java:49) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source) at java.base/java.util.concurrent.FutureTask.run(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) at java.base/java.lang.Thread.run(Unknown Source) Caused: hudson.plugins.git.GitException at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.checkResult(GitCommandsExecutor.java:89) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:69) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:47) at org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.execute(CliGitAPIImpl.java:1582) at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:173) at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:164) at hudson.remoting.UserRequest.perform(UserRequest.java:211) at hudson.remoting.UserRequest.perform(UserRequest.java:54) at hudson.remoting.Request$2.run(Request.java:377) at hudson.remoting.InterceptingExecutorService.lambda$wrap$0(InterceptingExecutorService.java:78) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) at hudson.remoting.Engine$1.lambda$newThread$0(Engine.java:137) at java.base/java.lang.Thread.run(Thread.java:840) Caused: java.io.IOException: Could not perform submodule update at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:201) at PluginClassLoader for git//hudson.plugins.git.GitSCM._checkout(GitSCM.java:1395) at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1277) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep.checkout(SCMStep.java:136) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:101) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:88) at PluginClassLoader for workflow-step-api//org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution.lambda$start$0(SynchronousNonBlockingStepExecution.java:49) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source) at java.base/java.util.concurrent.FutureTask.run(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) at java.base/java.lang.Thread.run(Unknown Source) ERROR: Maximum checkout retry attempts reached, aborting [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline hudson.plugins.git.GitException: Command "git submodule update --init --recursive omero-zarr-pixel-buffer" returned status code 1: stdout: stderr: error: pathspec 'omero-zarr-pixel-buffer' did not match any file(s) known to git at org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandIn(CliGitAPIImpl.java:2864) at org.jenkinsci.plugins.gitclient.CliGitAPIImpl.launchCommandWithCredentials(CliGitAPIImpl.java:2204) at org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.lambda$execute$0(CliGitAPIImpl.java:1579) at com.google.common.util.concurrent.TrustedListenableFutureTask$TrustedFutureInterruptibleTask.runInterruptibly(TrustedListenableFutureTask.java:128) at com.google.common.util.concurrent.InterruptibleTask.run(InterruptibleTask.java:74) at com.google.common.util.concurrent.TrustedListenableFutureTask.run(TrustedListenableFutureTask.java:80) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at com.google.common.util.concurrent.DirectExecutorService.execute(DirectExecutorService.java:52) at java.base/java.util.concurrent.ExecutorCompletionService.submit(ExecutorCompletionService.java:184) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.submitRemainingCommand(GitCommandsExecutor.java:77) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:70) Also: hudson.remoting.Channel$CallSiteStackTrace: Remote call to JNLP4-connect connection from devspace-testintegration-1.devspace_omero-network/172.18.0.12:48676 at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1916) at hudson.remoting.UserRequest$ExceptionResponse.retrieve(UserRequest.java:384) at hudson.remoting.Channel.call(Channel.java:1108) at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.execute(RemoteGitImpl.java:155) at java.base/jdk.internal.reflect.DirectMethodHandleAccessor.invoke(Unknown Source) at java.base/java.lang.reflect.Method.invoke(Unknown Source) at PluginClassLoader for git-client//org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler.invoke(RemoteGitImpl.java:140) at PluginClassLoader for git-client/jdk.proxy89/jdk.proxy89.$Proxy185.execute(Unknown Source) at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:196) at PluginClassLoader for git//hudson.plugins.git.GitSCM._checkout(GitSCM.java:1395) at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1277) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep.checkout(SCMStep.java:136) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:101) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:88) at PluginClassLoader for workflow-step-api//org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution.lambda$start$0(SynchronousNonBlockingStepExecution.java:49) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source) at java.base/java.util.concurrent.FutureTask.run(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) at java.base/java.lang.Thread.run(Unknown Source) Caused: hudson.plugins.git.GitException at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.checkResult(GitCommandsExecutor.java:89) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:69) at org.jenkinsci.plugins.gitclient.cgit.GitCommandsExecutor.invokeAll(GitCommandsExecutor.java:47) at org.jenkinsci.plugins.gitclient.CliGitAPIImpl$7.execute(CliGitAPIImpl.java:1582) at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:173) at org.jenkinsci.plugins.gitclient.RemoteGitImpl$CommandInvocationHandler$GitCommandMasterToSlaveCallable.call(RemoteGitImpl.java:164) at hudson.remoting.UserRequest.perform(UserRequest.java:211) at hudson.remoting.UserRequest.perform(UserRequest.java:54) at hudson.remoting.Request$2.run(Request.java:377) at hudson.remoting.InterceptingExecutorService.lambda$wrap$0(InterceptingExecutorService.java:78) at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) at hudson.remoting.Engine$1.lambda$newThread$0(Engine.java:137) at java.base/java.lang.Thread.run(Thread.java:840) Also: org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: e12f1e54-b36a-4dad-8977-30a46fe88a94 Caused: java.io.IOException: Could not perform submodule update at PluginClassLoader for git//hudson.plugins.git.extensions.impl.SubmoduleOption.onCheckoutCompleted(SubmoduleOption.java:201) at PluginClassLoader for git//hudson.plugins.git.GitSCM._checkout(GitSCM.java:1395) at PluginClassLoader for git//hudson.plugins.git.GitSCM.checkout(GitSCM.java:1277) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep.checkout(SCMStep.java:136) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:101) at PluginClassLoader for workflow-scm-step//org.jenkinsci.plugins.workflow.steps.scm.SCMStep$StepExecutionImpl.run(SCMStep.java:88) at PluginClassLoader for workflow-step-api//org.jenkinsci.plugins.workflow.steps.SynchronousNonBlockingStepExecution.lambda$start$0(SynchronousNonBlockingStepExecution.java:49) at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source) at java.base/java.util.concurrent.FutureTask.run(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) at java.base/java.lang.Thread.run(Unknown Source) Finished: FAILURE