17:29:27Started by upstream project "Trigger" build number 18717:29:27originally caused by:
17:29:27 Started by user devspace17:29:27Running as SYSTEM
17:29:27Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
17:29:27The recommended git tool is: NONE
17:29:27No credentials specified
17:29:27 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
17:29:27Fetching changes from the remote Git repository
17:29:27 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
17:29:27Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git17:29:27 > git --version # timeout=10
17:29:27 > git --version # 'git version 2.39.3'
17:29:27 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
17:29:32 > git rev-parse origin/merge_ci^{commit} # timeout=10
17:29:32Checking out Revision 01e94f4734770af20dd1dc6afbeebffdc97f8d71 (origin/merge_ci)
17:29:32 > git config core.sparsecheckout # timeout=10
17:29:32 > git checkout -f 01e94f4734770af20dd1dc6afbeebffdc97f8d71 # timeout=10
17:29:33Commit message: "Add version.properties to etc/omero.properties"
17:29:33 > git rev-list --no-walk 84affee5bf5ff57c19858749aa4fe5b8764aa0b7 # timeout=10
17:29:33Cleaning workspace
17:29:33 > git rev-parse --verify HEAD # timeout=10
17:29:33Resetting working tree
17:29:33 > git reset --hard # timeout=10
17:29:34 > git clean -fdx # timeout=10
17:29:34Copied 6 artifacts from "OMERO-python-superbuild-build" build number 15617:29:34[OMERO-build] $ /bin/bash -xe /tmp/jenkins247822682186720259.sh
17:29:34+ mv omero-scripts/dist/omero_scripts-5.8.4.dev0.tar.gz .
17:29:34+ cd src
17:29:34+ export OMERO_BRANCH=merge_ci
17:29:34+ OMERO_BRANCH=merge_ci
17:29:34+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
17:29:34+ source /home/omero/settings.env
17:29:34++ OMERO_DB_HOST=pg
17:29:34++ OMERO_DB_USER=postgres
17:29:34++ OMERO_DB_PASS=
17:29:34++ OMERO_ROOT_PASS=omero
17:29:34++ OMERO_DATA_DIR=/OMERO
17:29:34++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
17:29:34+ python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
17:29:37+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl17:29:39Collecting zeroc-ice==3.6.5
17:29:40 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
17:29:41WARNING: You are using pip version 21.2.3; however, version 24.2 is available.
17:29:41You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
17:29:41+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
17:29:42Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (73.0.1)
17:29:42Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.4)
17:29:43Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
17:29:43Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
17:29:43Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
17:29:43Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
17:29:43Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
17:29:43Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
17:29:43Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
17:29:43Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
17:29:43Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
17:29:43Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
17:29:43Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
17:29:43Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
17:29:43WARNING: You are using pip version 21.2.3; however, version 24.2 is available.
17:29:43You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
17:29:43+ source docs/hudson/OMERO.sh
17:29:43++ set -e
17:29:43++ set -u
17:29:43++ set -x
17:29:43++ source docs/hudson/functions.sh
17:29:43++ echo Building merge_ci
17:29:43Building merge_ci
17:29:43++ python3 ./build.py build-dev release-all
17:29:43OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
17:29:43Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
17:29:4317:29:43check-ivy:
17:29:43Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
17:29:43Created dir: /home/omero/workspace/OMERO-build/src/target
17:29:44:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
17:29:44:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:29:4517:29:45build-scons:
17:29:45Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
17:29:45No sub-builds to iterate on
17:29:45Entering /home/omero/workspace/OMERO-build/src/components/tools...
17:29:4517:29:45buildlist:
17:29:45:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
17:29:45:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:29:4517:29:45clean:
17:29:45Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
17:29:45Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
17:29:4517:29:45python-clean:
17:29:45WARNING: '' not a valid package name; please use only .-separated package names in setup.py
17:29:45/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-500-01e94f4734-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
17:29:45 warnings.warn(
17:29:45running clean
17:29:45Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
17:29:4617:29:46python-clean:
17:29:46WARNING: '' not a valid package name; please use only .-separated package names in setup.py
17:29:46/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-500-01e94f4734-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
17:29:46 warnings.warn(
17:29:46running clean
17:29:46Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
17:29:4617:29:46python-clean:
17:29:46WARNING: '' not a valid package name; please use only .-separated package names in setup.py
17:29:46/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-500-01e94f4734-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
17:29:46 warnings.warn(
17:29:46running clean
17:29:46Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
17:29:46Deleting directory /home/omero/workspace/OMERO-build/src/target
17:29:4617:29:46build-scons:
17:29:46Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
17:29:4617:29:46build:
17:29:46No sub-builds to iterate on
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
17:29:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
17:29:4617:29:46tools-init:
17:29:46no-op
17:29:4717:29:47retrieve:
17:29:47:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
17:29:47:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:29:47WARNING: An illegal reflective access operation has occurred
17:29:47WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
17:29:47WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
17:29:47WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
17:29:47WARNING: All illegal access operations will be denied in a future release
17:30:1717:30:17prepare:
17:30:17Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
17:30:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
17:30:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
17:30:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
17:30:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
17:30:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
17:30:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
17:30:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
17:30:1717:30:17pre-compile:
17:30:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
17:30:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
17:30:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
17:30:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
17:30:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
17:30:1717:30:17compile:
17:30:17no-op
17:30:1717:30:17package:
17:30:17Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
17:30:1817:30:18install:
17:30:18:: delivering :: omero#omero_client;working@121c5c9aa309 :: 5.6.3-500-01e94f4734-ice36 :: integration :: Tue Aug 27 17:29:46 UTC 2024
17:30:18 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
17:30:18:: publishing :: omero#omero_client
17:30:18 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-500-01e94f4734-ice36/omero_client-5.6.3-500-01e94f4734-ice36.jar
17:30:18 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-500-01e94f4734-ice36/omero_client-5.6.3-500-01e94f4734-ice36.xml
17:30:18Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
17:30:18Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
17:30:1817:30:18retrieve:
17:30:18:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
17:30:18:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:30:18Entering /home/omero/workspace/OMERO-build/src/components/tools...
17:30:1817:30:18dist:
17:30:18Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
17:30:18Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
17:30:18Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
17:30:18Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.8.4.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
17:30:18Copying 28 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
17:30:18Copying 28 files to /home/omero/workspace/OMERO-build/src/dist
17:30:18Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
17:30:18Entering /home/omero/workspace/OMERO-build/src/components/tests...
17:30:18Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
17:30:1817:30:18copy-licenses:
17:30:18Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
17:30:18Created dir: /home/omero/workspace/OMERO-build/src/dist/share
17:30:18Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
17:30:1817:30:18copy-history:
17:30:18Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
17:30:1817:30:18copy-etc:
17:30:18Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
17:30:18Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
17:30:1817:30:18copy-sql:
17:30:18Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
17:30:2717:30:27copy-server:
17:30:27 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
17:30:2817:30:28copy-client:
17:30:28Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
17:30:29 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
17:30:2917:30:29update-version:
17:30:29Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
17:30:2917:30:29create-workdirs:
17:30:29Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
17:30:29Created dir: /home/omero/workspace/OMERO-build/src/dist/var
17:30:2917:30:29copy-luts:
17:30:29Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
17:30:29Copying 39 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
17:30:2917:30:29test-compile:
17:30:29:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
17:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
17:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
17:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
17:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
17:30:29Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
17:30:29Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
17:30:3017:30:30testng-init:
17:30:30:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
17:30:30:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:30:3317:30:33,392 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
17:30:3317:30:33,407 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5390bdee - No custom configurators were discovered as a service.
17:30:3317:30:33,407 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5390bdee - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
17:30:3317:30:33,412 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5390bdee - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
17:30:3317:30:33,412 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
17:30:3317:30:33,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
17:30:3317:30:33,413 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5390bdee - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
17:30:3317:30:33,413 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5390bdee - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
17:30:3317:30:33,415 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5390bdee - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
17:30:3317:30:33,416 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
17:30:3317:30:33,416 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
17:30:3317:30:33,417 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@6b7945e1 - Resource [logback.xml] occurs multiple times on the classpath.
17:30:3317:30:33,417 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@6b7945e1 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
17:30:3317:30:33,417 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@6b7945e1 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
17:30:3317:30:33,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
17:30:3317:30:33,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
17:30:3317:30:33,691 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
17:30:3317:30:33,693 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2bc41bcb - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
17:30:3317:30:33,693 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2bc41bcb - Please move "immediateFlush" property into the enclosing appender.
17:30:3317:30:33,761 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2bc41bcb - Setting the "immediateFlush" property of the enclosing appender to true
17:30:3317:30:33,762 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
17:30:3317:30:33,762 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
17:30:3317:30:33,762 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
17:30:3317:30:33,762 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
17:30:3317:30:33,762 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
17:30:3317:30:33,762 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
17:30:3317:30:33,763 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@354aaf03 - End of configuration.
17:30:3317:30:33,766 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@63e31b89 - Registering current configuration as safe fallback point
17:30:3317:30:33,766 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5390bdee - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 351 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
17:30:3317:30:33lifecycle.test-compile:
17:30:33Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
17:30:33Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
17:30:34warning: [options] bootstrap class path not set in conjunction with -source 8
17:30:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:35import omero.grid.RawAccessRequest;
17:30:35 ^
17:30:35/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:35import omero.grid.RawAccessRequest;
17:30:35 ^
17:30:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:36import omero.grid.RawAccessRequest;
17:30:36 ^
17:30:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
17:30:36import omero.model.ImportJob;
17:30:36 ^
17:30:36/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
17:30:36import omero.model.ImportJobI;
17:30:36 ^
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
17:30:37 IObject link = (IObject) linkClass.newInstance();
17:30:37 ^
17:30:37 where T is a type-variable:
17:30:37 T extends Object declared in class Class
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
17:30:37 T copy = (T) obj.getClass().newInstance();
17:30:37 ^
17:30:37 where T is a type-variable:
17:30:37 T extends Object declared in class Class
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:37 RawAccessRequest raw = new RawAccessRequest();
17:30:37 ^
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:37 RawAccessRequest raw = new RawAccessRequest();
17:30:37 ^
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
17:30:37 raw.repoUuid = legacy.root().getHash().getValue();
17:30:37 ^
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
17:30:37 raw.command = "rm";
17:30:37 ^
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
17:30:37 raw.args = Arrays.asList(path);
17:30:37 ^
17:30:37/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
17:30:37 final IObject link = linkClass.newInstance();
17:30:37 ^
17:30:37 where T is a type-variable:
17:30:37 T extends Object declared in class Class
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
17:30:38 originalLink.setChild(annotationClass.newInstance());
17:30:38 ^
17:30:38 where T is a type-variable:
17:30:38 T extends Object declared in class Class
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
17:30:38 RoiResult r = svc.findByImage(id, new RoiOptions());
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:38 final RawAccessRequest request = new RawAccessRequest();
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:38 final RawAccessRequest request = new RawAccessRequest();
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
17:30:38 request.repoUuid = repo.root().getHash().getValue();
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
17:30:38 request.command = "exists";
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
17:30:38 request.args = Collections.singletonList(dirPath);
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:38 final RawAccessRequest request = new RawAccessRequest();
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
17:30:38 final RawAccessRequest request = new RawAccessRequest();
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
17:30:38 request.repoUuid = repo.root().getHash().getValue();
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
17:30:38 request.command = "exists";
17:30:38 ^
17:30:38/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
17:30:38 request.args = Collections.singletonList(dirName);
17:30:38 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
17:30:39 final ImportJob importJob = new ImportJobI();
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
17:30:39 final ImportJob importJob = new ImportJobI();
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
17:30:39 importJob.setImageName(omero.rtypes.rstring(name));
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
17:30:39 importJob.setImageDescription(omero.rtypes.rstring(desc));
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
17:30:39 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
17:30:39 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
17:30:39 final String savedName = sent.getImageName().getValue().toString();
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
17:30:39 final String savedDesc = sent.getImageDescription().getValue().toString();
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
17:30:39 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
17:30:39 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
17:30:39 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
17:30:39 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 RoiResult r = svc.findByImage(image.getId().getValue(),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 l = svc.getRoiMeasurements(image.getId().getValue(), options);
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 l = svc.getRoiMeasurements(image.getId().getValue(), options);
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
17:30:39 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
17:30:39 table = svc.getTable(f.getId().getValue());
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 RoiResult r = svc.findByImage(image.getId().getValue(),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
17:30:39 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
17:30:39 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
17:30:39 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
17:30:39 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
17:30:39 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
17:30:39 svc.getShapeStatsRestricted(
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
17:30:39 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
17:30:39 ^
17:30:39/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
17:30:39 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
17:30:39 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
17:30:40 request.typesToIgnore = Collections.singletonList("TagAnnotation");
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
17:30:40 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
17:30:40 request.typesToIgnore = Collections.singletonList("Annotation");
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
17:30:40 request.typesToIgnore = Collections.singletonList("Annotation");
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
17:30:40 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
17:30:40 p2.setRelatedTo(p1);
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
17:30:40 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
17:30:40 pixels1.setRelatedTo(pixels2);
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
17:30:40 Pixels pixels = pixels1.getRelatedTo();
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
17:30:40 Assert.assertNull(pixels1.getRelatedTo());
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
17:30:40 pixels1.setRelatedTo(pixels2);
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
17:30:40 Pixels pixels = pixels1.getRelatedTo();
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
17:30:40 Assert.assertNull(pixels1.getRelatedTo());
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:40 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:40 l = svc.getRoiMeasurements(image.getId().getValue(), options);
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:40 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
17:30:40 ^
17:30:40/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
17:30:40 l = svc.getRoiMeasurements(image.getId().getValue(), options);
17:30:40 ^
17:30:40Note: Some input files use unchecked or unsafe operations.
17:30:40Note: Recompile with -Xlint:unchecked for details.
17:30:4088 warnings
17:30:40Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1715156585.tmp
17:30:40Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
17:30:40:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:30:40:: delivering :: omero#OmeroJava-test;working@121c5c9aa309 :: 5.6.3-500-01e94f4734-ice36 :: integration :: Tue Aug 27 17:30:29 UTC 2024
17:30:40 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
17:30:40:: publishing :: omero#OmeroJava-test
17:30:40 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-500-01e94f4734-ice36.jar
17:30:40 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-500-01e94f4734-ice36.xml
17:30:4017:30:40build-eclipse:
17:30:40No sub-builds to iterate on
17:30:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
17:30:4017:30:40retrieve:
17:30:40:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
17:30:40:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
17:30:4317:30:43prepare:
17:30:43Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
17:30:4417:30:44release-clients:
17:30:44Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-500-01e94f4734-ice36.zip
17:30:5017:30:50release-zip:
17:30:50Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-500-01e94f4734-ice36.zip
17:31:0317:31:03BUILD SUCCESSFUL
17:31:03Total time: 1 minute 19 seconds
17:31:03++ '[' -d .git ']'
17:31:03++ python3 ./build.py release-src
17:31:03OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
17:31:03Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
17:31:0317:31:03release-src-git:
17:31:03Releasing openmicroscopy-5.6.3-500-01e94f4734-ice36
17:31:05 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-500-01e94f4734-ice36.zip
17:31:05 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-500-01e94f4734-ice36-base.zip
17:31:0617:31:06BUILD SUCCESSFUL
17:31:06Total time: 3 seconds
17:31:06++ echo BUILD_NUMBER=158
17:31:06++ echo OMERO_BRANCH=merge_ci
17:31:06++ git_info
17:31:06+++ git rev-parse HEAD
17:31:06++ HEAD=01e94f4734770af20dd1dc6afbeebffdc97f8d71
17:31:06++ git log --max-count=1 01e94f4734770af20dd1dc6afbeebffdc97f8d71
17:31:06++ env
17:31:06++ sort
17:31:06Archiving artifacts
17:31:35Finished: SUCCESS
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