16:17:22Started by upstream project "Trigger" build number 21716:17:22originally caused by:
16:17:22 Started by user devspace16:17:22Running as SYSTEM
16:17:22Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
16:17:22The recommended git tool is: NONE
16:17:22No credentials specified
16:17:22 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
16:17:22Fetching changes from the remote Git repository
16:17:22 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
16:17:22Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git16:17:22 > git --version # timeout=10
16:17:22 > git --version # 'git version 2.43.5'
16:17:22 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
16:17:27 > git rev-parse origin/merge_ci^{commit} # timeout=10
16:17:27Checking out Revision 97809076588b26e6ee922d25f1b0a766c6512b91 (origin/merge_ci)
16:17:27 > git config core.sparsecheckout # timeout=10
16:17:27 > git checkout -f 97809076588b26e6ee922d25f1b0a766c6512b91 # timeout=10
16:17:28Commit message: "Add version.properties to etc/omero.properties"
16:17:28 > git rev-list --no-walk 77df23582694bf421cab9067d65caa48a6788ea0 # timeout=10
16:17:28Cleaning workspace
16:17:28 > git rev-parse --verify HEAD # timeout=10
16:17:28Resetting working tree
16:17:28 > git reset --hard # timeout=10
16:17:28 > git clean -fdx # timeout=10
16:17:29Copied 6 artifacts from "OMERO-python-superbuild-build" build number 17916:17:29[OMERO-build] $ /bin/bash -xe /tmp/jenkins15912554118290682255.sh
16:17:29+ mv omero-scripts/dist/omero_scripts-5.8.4.dev0.tar.gz .
16:17:29+ cd src
16:17:29+ export OMERO_BRANCH=merge_ci
16:17:29+ OMERO_BRANCH=merge_ci
16:17:29+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
16:17:29+ source /home/omero/settings.env
16:17:29++ OMERO_DB_HOST=pg
16:17:29++ OMERO_DB_USER=postgres
16:17:29++ OMERO_DB_PASS=
16:17:29++ OMERO_ROOT_PASS=omero
16:17:29++ OMERO_DATA_DIR=/OMERO
16:17:29++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
16:17:29+ python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
16:17:33+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl16:17:35Collecting zeroc-ice==3.6.5
16:17:35 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
16:17:38WARNING: You are using pip version 21.2.3; however, version 24.2 is available.
16:17:38You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
16:17:38+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
16:17:38Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (75.1.0)
16:17:39Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.5)
16:17:39Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
16:17:39Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
16:17:39Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
16:17:39Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
16:17:39Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
16:17:39Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
16:17:39Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
16:17:39Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
16:17:39Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
16:17:39Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
16:17:39Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
16:17:39Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
16:17:39WARNING: You are using pip version 21.2.3; however, version 24.2 is available.
16:17:39You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
16:17:39+ source docs/hudson/OMERO.sh
16:17:39++ set -e
16:17:39++ set -u
16:17:39++ set -x
16:17:39++ source docs/hudson/functions.sh
16:17:39++ echo Building merge_ci
16:17:39Building merge_ci
16:17:39++ python3 ./build.py build-dev release-all
16:17:39OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
16:17:39Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
16:17:4016:17:40check-ivy:
16:17:40Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
16:17:40Created dir: /home/omero/workspace/OMERO-build/src/target
16:17:40:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
16:17:40:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:17:4116:17:41build-scons:
16:17:41Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
16:17:41No sub-builds to iterate on
16:17:41Entering /home/omero/workspace/OMERO-build/src/components/tools...
16:17:4116:17:41buildlist:
16:17:41:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
16:17:41:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:17:4116:17:41clean:
16:17:41Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
16:17:41Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
16:17:4216:17:42python-clean:
16:17:42WARNING: '' not a valid package name; please use only .-separated package names in setup.py
16:17:42/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-510-9780907658-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
16:17:42 warnings.warn(
16:17:42running clean
16:17:42Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
16:17:4216:17:42python-clean:
16:17:42WARNING: '' not a valid package name; please use only .-separated package names in setup.py
16:17:42/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-510-9780907658-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
16:17:42 warnings.warn(
16:17:42running clean
16:17:42Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
16:17:4216:17:42python-clean:
16:17:42WARNING: '' not a valid package name; please use only .-separated package names in setup.py
16:17:42/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-510-9780907658-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
16:17:42 warnings.warn(
16:17:42running clean
16:17:42Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
16:17:42Deleting directory /home/omero/workspace/OMERO-build/src/target
16:17:4216:17:42build-scons:
16:17:42Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
16:17:4216:17:42build:
16:17:42No sub-builds to iterate on
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
16:17:42Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
16:17:4216:17:42tools-init:
16:17:42no-op
16:17:4316:17:43retrieve:
16:17:43:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
16:17:43:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:17:43WARNING: An illegal reflective access operation has occurred
16:17:43WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
16:17:43WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
16:17:43WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
16:17:43WARNING: All illegal access operations will be denied in a future release
16:18:1016:18:10prepare:
16:18:10Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
16:18:10Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
16:18:10Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
16:18:10Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
16:18:10Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
16:18:10Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
16:18:10Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
16:18:10Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
16:18:1016:18:10pre-compile:
16:18:10Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
16:18:10Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
16:18:10Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
16:18:10Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
16:18:10Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
16:18:1016:18:10compile:
16:18:10no-op
16:18:1016:18:10package:
16:18:10Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
16:18:1116:18:11install:
16:18:11:: delivering :: omero#omero_client;working@2ccf0a67313e :: 5.6.3-510-9780907658-ice36 :: integration :: Fri Sep 20 16:17:42 UTC 2024
16:18:11 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
16:18:11:: publishing :: omero#omero_client
16:18:11 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-510-9780907658-ice36/omero_client-5.6.3-510-9780907658-ice36.jar
16:18:11 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-510-9780907658-ice36/omero_client-5.6.3-510-9780907658-ice36.xml
16:18:11Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
16:18:11Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
16:18:1116:18:11retrieve:
16:18:11:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
16:18:11:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:18:11Entering /home/omero/workspace/OMERO-build/src/components/tools...
16:18:1116:18:11dist:
16:18:11Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
16:18:11Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
16:18:11Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
16:18:11Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.8.4.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
16:18:11Copying 28 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
16:18:11Copying 28 files to /home/omero/workspace/OMERO-build/src/dist
16:18:11Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
16:18:12Entering /home/omero/workspace/OMERO-build/src/components/tests...
16:18:12Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
16:18:1216:18:12copy-licenses:
16:18:12Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
16:18:12Created dir: /home/omero/workspace/OMERO-build/src/dist/share
16:18:12Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
16:18:1216:18:12copy-history:
16:18:12Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
16:18:1216:18:12copy-etc:
16:18:12Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
16:18:12Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
16:18:1216:18:12copy-sql:
16:18:12Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
16:18:1816:18:18copy-server:
16:18:18 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
16:18:1816:18:18copy-client:
16:18:18Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
16:18:19 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
16:18:1916:18:19update-version:
16:18:19Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
16:18:1916:18:19create-workdirs:
16:18:19Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
16:18:19Created dir: /home/omero/workspace/OMERO-build/src/dist/var
16:18:1916:18:19copy-luts:
16:18:19Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
16:18:19Copying 39 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
16:18:1916:18:19test-compile:
16:18:19:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:18:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
16:18:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
16:18:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
16:18:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
16:18:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
16:18:20Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
16:18:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
16:18:2016:18:20testng-init:
16:18:20:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
16:18:20:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:18:2316:18:23,654 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
16:18:2316:18:23,658 |-INFO in ch.qos.logback.classic.util.ContextInitializer@42141c59 - No custom configurators were discovered as a service.
16:18:2316:18:23,658 |-INFO in ch.qos.logback.classic.util.ContextInitializer@42141c59 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
16:18:2316:18:23,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@42141c59 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
16:18:2316:18:23,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
16:18:2316:18:23,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
16:18:2316:18:23,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@42141c59 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
16:18:2316:18:23,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@42141c59 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
16:18:2316:18:23,665 |-INFO in ch.qos.logback.classic.util.ContextInitializer@42141c59 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
16:18:2316:18:23,665 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
16:18:2316:18:23,665 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
16:18:2316:18:23,667 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@49854d93 - Resource [logback.xml] occurs multiple times on the classpath.
16:18:2316:18:23,667 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@49854d93 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
16:18:2316:18:23,667 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@49854d93 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
16:18:2316:18:23,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
16:18:2316:18:23,894 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
16:18:2316:18:23,916 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
16:18:2316:18:23,918 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@29d7d117 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
16:18:2316:18:23,918 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@29d7d117 - Please move "immediateFlush" property into the enclosing appender.
16:18:2316:18:23,985 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@29d7d117 - Setting the "immediateFlush" property of the enclosing appender to true
16:18:2316:18:23,986 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
16:18:2316:18:23,986 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
16:18:2316:18:23,986 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
16:18:2316:18:23,986 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
16:18:2316:18:23,986 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
16:18:2316:18:23,986 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
16:18:2316:18:23,987 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5213a8f7 - End of configuration.
16:18:2316:18:23,989 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@30078038 - Registering current configuration as safe fallback point
16:18:2316:18:23,989 |-INFO in ch.qos.logback.classic.util.ContextInitializer@42141c59 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 324 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
16:18:2316:18:23lifecycle.test-compile:
16:18:23Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
16:18:24Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
16:18:24warning: [options] bootstrap class path not set in conjunction with -source 8
16:18:25/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:25import omero.grid.RawAccessRequest;
16:18:25 ^
16:18:26/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:26import omero.grid.RawAccessRequest;
16:18:26 ^
16:18:26/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:26import omero.grid.RawAccessRequest;
16:18:26 ^
16:18:26/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
16:18:26import omero.model.ImportJob;
16:18:26 ^
16:18:26/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
16:18:26import omero.model.ImportJobI;
16:18:26 ^
16:18:27/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
16:18:27 IObject link = (IObject) linkClass.newInstance();
16:18:27 ^
16:18:27 where T is a type-variable:
16:18:27 T extends Object declared in class Class
16:18:27/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
16:18:27 T copy = (T) obj.getClass().newInstance();
16:18:27 ^
16:18:27 where T is a type-variable:
16:18:27 T extends Object declared in class Class
16:18:27/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:27 RawAccessRequest raw = new RawAccessRequest();
16:18:27 ^
16:18:27/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:27 RawAccessRequest raw = new RawAccessRequest();
16:18:27 ^
16:18:27/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
16:18:27 raw.repoUuid = legacy.root().getHash().getValue();
16:18:27 ^
16:18:27/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
16:18:27 raw.command = "rm";
16:18:27 ^
16:18:27/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
16:18:27 raw.args = Arrays.asList(path);
16:18:27 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
16:18:28 final IObject link = linkClass.newInstance();
16:18:28 ^
16:18:28 where T is a type-variable:
16:18:28 T extends Object declared in class Class
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
16:18:28 originalLink.setChild(annotationClass.newInstance());
16:18:28 ^
16:18:28 where T is a type-variable:
16:18:28 T extends Object declared in class Class
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
16:18:28 RoiResult r = svc.findByImage(id, new RoiOptions());
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:28 final RawAccessRequest request = new RawAccessRequest();
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:28 final RawAccessRequest request = new RawAccessRequest();
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
16:18:28 request.repoUuid = repo.root().getHash().getValue();
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
16:18:28 request.command = "exists";
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
16:18:28 request.args = Collections.singletonList(dirPath);
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:28 final RawAccessRequest request = new RawAccessRequest();
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
16:18:28 final RawAccessRequest request = new RawAccessRequest();
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
16:18:28 request.repoUuid = repo.root().getHash().getValue();
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
16:18:28 request.command = "exists";
16:18:28 ^
16:18:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
16:18:28 request.args = Collections.singletonList(dirName);
16:18:28 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
16:18:29 final ImportJob importJob = new ImportJobI();
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
16:18:29 final ImportJob importJob = new ImportJobI();
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
16:18:29 importJob.setImageName(omero.rtypes.rstring(name));
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
16:18:29 importJob.setImageDescription(omero.rtypes.rstring(desc));
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
16:18:29 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
16:18:29 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
16:18:29 final String savedName = sent.getImageName().getValue().toString();
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
16:18:29 final String savedDesc = sent.getImageDescription().getValue().toString();
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
16:18:29 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
16:18:29 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
16:18:29 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
16:18:29 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 RoiResult r = svc.findByImage(image.getId().getValue(),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 l = svc.getRoiMeasurements(image.getId().getValue(), options);
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 l = svc.getRoiMeasurements(image.getId().getValue(), options);
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
16:18:29 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
16:18:29 table = svc.getTable(f.getId().getValue());
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 RoiResult r = svc.findByImage(image.getId().getValue(),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
16:18:29 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
16:18:29 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
16:18:29 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
16:18:29 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
16:18:29 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
16:18:29 svc.getShapeStatsRestricted(
16:18:29 ^
16:18:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
16:18:29 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
16:18:29 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
16:18:30 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
16:18:30 request.typesToIgnore = Collections.singletonList("TagAnnotation");
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
16:18:30 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
16:18:30 request.typesToIgnore = Collections.singletonList("Annotation");
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
16:18:30 request.typesToIgnore = Collections.singletonList("Annotation");
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
16:18:30 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
16:18:30 p2.setRelatedTo(p1);
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
16:18:30 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
16:18:30 pixels1.setRelatedTo(pixels2);
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
16:18:30 Pixels pixels = pixels1.getRelatedTo();
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
16:18:30 Assert.assertNull(pixels1.getRelatedTo());
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
16:18:30 pixels1.setRelatedTo(pixels2);
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
16:18:30 Pixels pixels = pixels1.getRelatedTo();
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
16:18:30 Assert.assertNull(pixels1.getRelatedTo());
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:30 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:30 l = svc.getRoiMeasurements(image.getId().getValue(), options);
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:30 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
16:18:30 ^
16:18:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
16:18:30 l = svc.getRoiMeasurements(image.getId().getValue(), options);
16:18:30 ^
16:18:30Note: Some input files use unchecked or unsafe operations.
16:18:30Note: Recompile with -Xlint:unchecked for details.
16:18:3088 warnings
16:18:30Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1070038181.tmp
16:18:30Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
16:18:30:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:18:30:: delivering :: omero#OmeroJava-test;working@2ccf0a67313e :: 5.6.3-510-9780907658-ice36 :: integration :: Fri Sep 20 16:18:20 UTC 2024
16:18:30 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
16:18:30:: publishing :: omero#OmeroJava-test
16:18:30 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-510-9780907658-ice36.jar
16:18:30 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-510-9780907658-ice36.xml
16:18:3016:18:30build-eclipse:
16:18:30No sub-builds to iterate on
16:18:30Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
16:18:3016:18:30retrieve:
16:18:30:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
16:18:30:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
16:18:3316:18:33prepare:
16:18:33Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
16:18:3416:18:34release-clients:
16:18:34Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-510-9780907658-ice36.zip
16:18:4016:18:40release-zip:
16:18:40Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-510-9780907658-ice36.zip
16:18:5216:18:52BUILD SUCCESSFUL
16:18:52Total time: 1 minute 12 seconds
16:18:52++ '[' -d .git ']'
16:18:52++ python3 ./build.py release-src
16:18:52OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
16:18:52Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
16:18:5316:18:53release-src-git:
16:18:53Releasing openmicroscopy-5.6.3-510-9780907658-ice36
16:18:54 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-510-9780907658-ice36.zip
16:18:54 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-510-9780907658-ice36-base.zip
16:18:5616:18:56BUILD SUCCESSFUL
16:18:56Total time: 3 seconds
16:18:56++ echo BUILD_NUMBER=182
16:18:56++ echo OMERO_BRANCH=merge_ci
16:18:56++ git_info
16:18:56+++ git rev-parse HEAD
16:18:56++ HEAD=97809076588b26e6ee922d25f1b0a766c6512b91
16:18:56++ git log --max-count=1 97809076588b26e6ee922d25f1b0a766c6512b91
16:18:56++ env
16:18:56++ sort
16:18:56Archiving artifacts
16:19:24Finished: SUCCESS
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