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10:23:12 Started by upstream project "Trigger" build number 341
10:23:12 originally caused by:
10:23:12  Started by user devspace
10:23:12 Running as SYSTEM
10:23:12 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
10:23:12 The recommended git tool is: NONE
10:23:12 No credentials specified
10:23:12  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
10:23:12 Fetching changes from the remote Git repository
10:23:12  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
10:23:12 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
10:23:12  > git --version # timeout=10
10:23:12  > git --version # 'git version 2.43.5'
10:23:12  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
10:23:19  > git rev-parse origin/merge_ci^{commit} # timeout=10
10:23:19 Checking out Revision 5d9812eafd9e1f09abcbef3acb26ecf878681f5c (origin/merge_ci)
10:23:19  > git config core.sparsecheckout # timeout=10
10:23:19  > git checkout -f 5d9812eafd9e1f09abcbef3acb26ecf878681f5c # timeout=10
10:23:19 Commit message: "Add version.properties to etc/omero.properties"
10:23:19  > git rev-list --no-walk c3854c45979990d5a481e7da53a3c1aed6776a87 # timeout=10
10:23:19 Cleaning workspace
10:23:19  > git rev-parse --verify HEAD # timeout=10
10:23:19 Resetting working tree
10:23:19  > git reset --hard # timeout=10
10:23:19  > git clean -fdx # timeout=10
10:23:20 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 287
10:23:20 [OMERO-build] $ /bin/bash -xe /tmp/jenkins14469509220195712157.sh
10:23:20 + mv omero-scripts/dist/omero_scripts-5.9.1.dev0.tar.gz .
10:23:20 + cd src
10:23:20 + export OMERO_BRANCH=merge_ci
10:23:20 + OMERO_BRANCH=merge_ci
10:23:20 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
10:23:20 + source /home/omero/settings.env
10:23:20 ++ OMERO_DB_HOST=pg
10:23:20 ++ OMERO_DB_USER=postgres
10:23:20 ++ OMERO_DB_PASS=
10:23:20 ++ OMERO_ROOT_PASS=omero
10:23:20 ++ OMERO_DATA_DIR=/OMERO
10:23:20 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
10:23:20 + python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
10:23:24 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl
10:23:27 Collecting zeroc-ice==3.6.5
10:23:28   Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
10:23:30 WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
10:23:30 You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
10:23:30 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
10:23:30 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (75.8.0)
10:23:31 Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.6)
10:23:32 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
10:23:32 Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
10:23:32 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
10:23:32 Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
10:23:32 Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
10:23:32 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
10:23:32 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
10:23:32 Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
10:23:32 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
10:23:32 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
10:23:32 Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
10:23:32 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
10:23:32 WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
10:23:32 You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
10:23:32 + source docs/hudson/OMERO.sh
10:23:32 ++ set -e
10:23:32 ++ set -u
10:23:32 ++ set -x
10:23:32 ++ source docs/hudson/functions.sh
10:23:32 ++ echo Building merge_ci
10:23:32 Building merge_ci
10:23:32 ++ python3 ./build.py build-dev release-all
10:23:32 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
10:23:33 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
10:23:34 
10:23:34 check-ivy:
10:23:34 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
10:23:34 Created dir: /home/omero/workspace/OMERO-build/src/target
10:23:35 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:23:35 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:23:37 
10:23:37 build-scons:
10:23:37 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
10:23:37 No sub-builds to iterate on
10:23:38 Entering /home/omero/workspace/OMERO-build/src/components/tools...
10:23:38 
10:23:38 buildlist:
10:23:38 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:23:38 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:23:38 
10:23:38 clean:
10:23:38 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:38 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:39 
10:23:39 python-clean:
10:23:39 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:23:39 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-5d9812eafd-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:23:39   warnings.warn(
10:23:39 running clean
10:23:39 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
10:23:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:23:39 
10:23:39 python-clean:
10:23:39 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:23:39 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-5d9812eafd-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:23:39   warnings.warn(
10:23:39 running clean
10:23:39 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
10:23:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:23:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:23:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:23:39 
10:23:39 python-clean:
10:23:39 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:23:39 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-5d9812eafd-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:23:39   warnings.warn(
10:23:39 running clean
10:23:40 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
10:23:40 Deleting directory /home/omero/workspace/OMERO-build/src/target
10:23:40 
10:23:40 build-scons:
10:23:40 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
10:23:40 
10:23:40 build:
10:23:40 No sub-builds to iterate on
10:23:40 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:40 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:40 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:23:40 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:23:40 
10:23:40 tools-init:
10:23:40 no-op
10:23:40 
10:23:40 retrieve:
10:23:40 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:23:40 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:23:41 WARNING: An illegal reflective access operation has occurred
10:23:41 WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
10:23:41 WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
10:23:41 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
10:23:41 WARNING: All illegal access operations will be denied in a future release
10:24:17 
10:24:17 prepare:
10:24:17 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
10:24:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
10:24:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
10:24:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:24:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17 
10:24:17 pre-compile:
10:24:17 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17 
10:24:17 compile:
10:24:17 no-op
10:24:17 
10:24:17 package:
10:24:17 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
10:24:18 
10:24:18 install:
10:24:18 :: delivering :: omero#omero_client;working@bdaf9f08f5d1 :: 5.6.3-531-5d9812eafd-ice36 :: integration :: Tue Jan 14 10:23:40 UTC 2025
10:24:18 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
10:24:18 :: publishing :: omero#omero_client
10:24:18 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-5d9812eafd-ice36/omero_client-5.6.3-531-5d9812eafd-ice36.jar
10:24:18 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-5d9812eafd-ice36/omero_client-5.6.3-531-5d9812eafd-ice36.xml
10:24:18 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:18 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:18 
10:24:18 retrieve:
10:24:18 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:24:18 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:19 Entering /home/omero/workspace/OMERO-build/src/components/tools...
10:24:19 
10:24:19 dist:
10:24:19 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
10:24:19 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
10:24:19 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
10:24:19 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.9.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
10:24:20 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
10:24:20 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
10:24:20 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
10:24:20 Entering /home/omero/workspace/OMERO-build/src/components/tests...
10:24:20 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
10:24:20 
10:24:20 copy-licenses:
10:24:20 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
10:24:20 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
10:24:20 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
10:24:20 
10:24:20 copy-history:
10:24:20 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
10:24:20 
10:24:20 copy-etc:
10:24:20 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
10:24:20 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
10:24:20 
10:24:20 copy-sql:
10:24:20 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
10:24:29 
10:24:29 copy-server:
10:24:29 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
10:24:30 
10:24:30 copy-client:
10:24:30 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
10:24:31 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
10:24:31 
10:24:31 update-version:
10:24:31 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
10:24:31 
10:24:31 create-workdirs:
10:24:31 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
10:24:31 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
10:24:31 
10:24:31 copy-luts:
10:24:31 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
10:24:31 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
10:24:31 
10:24:31 test-compile:
10:24:31 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:24:32 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:32 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:32 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:24:32 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:24:32 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
10:24:32 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:24:32 
10:24:32 testng-init:
10:24:32 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:24:32 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:38 10:24:37,771 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
10:24:38 10:24:37,774 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - No custom configurators were discovered as a service.
10:24:38 10:24:37,774 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
10:24:38 10:24:37,778 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
10:24:38 10:24:37,778 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
10:24:38 10:24:37,779 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
10:24:38 10:24:37,780 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
10:24:38 10:24:37,780 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
10:24:38 10:24:37,781 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
10:24:38 10:24:37,782 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
10:24:38 10:24:37,782 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
10:24:38 10:24:37,783 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ea6687b - Resource [logback.xml] occurs multiple times on the classpath.
10:24:38 10:24:37,783 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ea6687b - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
10:24:38 10:24:37,783 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ea6687b - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
10:24:38 10:24:38,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
10:24:38 10:24:38,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
10:24:38 10:24:38,027 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
10:24:38 10:24:38,029 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@5fdd9b96 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
10:24:38 10:24:38,029 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@5fdd9b96 - Please move "immediateFlush" property into the enclosing appender.
10:24:38 10:24:38,094 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@5fdd9b96 - Setting the "immediateFlush" property of the enclosing appender to true
10:24:38 10:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
10:24:38 10:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
10:24:38 10:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
10:24:38 10:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
10:24:38 10:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
10:24:38 10:24:38,095 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
10:24:38 10:24:38,096 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@50ed6392 - End of configuration.
10:24:38 10:24:38,098 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5ee29735 - Registering current configuration as safe fallback point
10:24:38 10:24:38,098 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 317 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
10:24:38 
10:24:38 lifecycle.test-compile:
10:24:38 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:24:38 Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:24:38 warning: [options] bootstrap class path not set in conjunction with -source 8
10:24:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:41 import omero.grid.RawAccessRequest;
10:24:41                  ^
10:24:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:41 import omero.grid.RawAccessRequest;
10:24:41                  ^
10:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:42 import omero.grid.RawAccessRequest;
10:24:42                  ^
10:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:42 import omero.model.ImportJob;
10:24:42                   ^
10:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:24:42 import omero.model.ImportJobI;
10:24:42                   ^
10:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
10:24:42         IObject link = (IObject) linkClass.newInstance();
10:24:42                                           ^
10:24:42   where T is a type-variable:
10:24:42     T extends Object declared in class Class
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
10:24:43         T copy = (T) obj.getClass().newInstance();
10:24:43                                    ^
10:24:43   where T is a type-variable:
10:24:43     T extends Object declared in class Class
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:43         RawAccessRequest raw = new RawAccessRequest();
10:24:43         ^
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:43         RawAccessRequest raw = new RawAccessRequest();
10:24:43                                    ^
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:24:43         raw.repoUuid = legacy.root().getHash().getValue();
10:24:43            ^
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
10:24:43         raw.command = "rm";
10:24:43            ^
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
10:24:43         raw.args = Arrays.asList(path);
10:24:43            ^
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
10:24:43         final IObject link = linkClass.newInstance();
10:24:43                                       ^
10:24:43   where T is a type-variable:
10:24:43     T extends Object declared in class Class
10:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
10:24:43             originalLink.setChild(annotationClass.newInstance());
10:24:43                                                  ^
10:24:43   where T is a type-variable:
10:24:43     T extends Object declared in class Class
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:24:44         RoiResult r = svc.findByImage(id, new RoiOptions());
10:24:44                          ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44         final RawAccessRequest request = new RawAccessRequest();
10:24:44               ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44         final RawAccessRequest request = new RawAccessRequest();
10:24:44                                              ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:24:44         request.repoUuid = repo.root().getHash().getValue();
10:24:44                ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
10:24:44         request.command = "exists";
10:24:44                ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
10:24:44         request.args = Collections.singletonList(dirPath);
10:24:44                ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44         final RawAccessRequest request = new RawAccessRequest();
10:24:44               ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44         final RawAccessRequest request = new RawAccessRequest();
10:24:44                                              ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:24:44         request.repoUuid = repo.root().getHash().getValue();
10:24:44                ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
10:24:44         request.command = "exists";
10:24:44                ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
10:24:44         request.args = Collections.singletonList(dirName);
10:24:44                ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44         final ImportJob importJob = new ImportJobI();
10:24:44               ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:24:44         final ImportJob importJob = new ImportJobI();
10:24:44                                         ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
10:24:44         importJob.setImageName(omero.rtypes.rstring(name));
10:24:44                  ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
10:24:44         importJob.setImageDescription(omero.rtypes.rstring(desc));
10:24:44                  ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:24:44         ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:24:44                           ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:24:44         final String savedName = sent.getImageName().getValue().toString();
10:24:44                                      ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:24:44         final String savedDesc = sent.getImageDescription().getValue().toString();
10:24:44                                      ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:24:44               ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:24:44                                               ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:24:44         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
10:24:44                                                        ^
10:24:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:24:44         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
10:24:44                                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         RoiResult r = svc.findByImage(image.getId().getValue(),
10:24:45                          ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45                                 ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45                                 ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
10:24:45         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
10:24:45                                          ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45                                 ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
10:24:45         table = svc.getTable(f.getId().getValue());
10:24:45                    ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         RoiResult r = svc.findByImage(image.getId().getValue(),
10:24:45                          ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:24:45         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:24:45         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:24:45                   ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:24:45                                   ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:24:45                                    ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:24:45                                                    ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
10:24:45             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:24:45                                       ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:24:45                                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:24:45                                                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:24:45                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:24:45                                                         ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:24:45                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:24:45                                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:24:45                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:24:45                                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:24:45                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:24:45                                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:24:45                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:24:45                                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:24:45                 svc.getShapeStatsRestricted(
10:24:45                    ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:24:45         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
10:24:45                                        ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:24:45                                      ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45         request.typesToIgnore = Collections.singletonList("TagAnnotation");
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45         request.typesToIgnore = Collections.singletonList("Annotation");
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45                     request.typesToIgnore = Collections.singletonList("Annotation");
10:24:45                            ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:24:45                                      ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45         p2.setRelatedTo(p1);
10:24:45           ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
10:24:45                                           ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45         pixels1.setRelatedTo(pixels2);
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45         Pixels pixels = pixels1.getRelatedTo();
10:24:45                                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45         Assert.assertNull(pixels1.getRelatedTo());
10:24:45                                  ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45         pixels1.setRelatedTo(pixels2);
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45         Pixels pixels = pixels1.getRelatedTo();
10:24:45                                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45         Assert.assertNull(pixels1.getRelatedTo());
10:24:45                                  ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45                                 ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45                ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45                                 ^
10:24:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45         l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45                ^
10:24:45 Note: Some input files use unchecked or unsafe operations.
10:24:45 Note: Recompile with -Xlint:unchecked for details.
10:24:45 88 warnings
10:24:45 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1574017291.tmp
10:24:45 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
10:24:45 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:45 :: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-531-5d9812eafd-ice36 :: integration :: Tue Jan 14 10:24:32 UTC 2025
10:24:45 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
10:24:45 :: publishing :: omero#OmeroJava-test
10:24:45 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-5d9812eafd-ice36.jar
10:24:45 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-5d9812eafd-ice36.xml
10:24:45 
10:24:45 build-eclipse:
10:24:45 No sub-builds to iterate on
10:24:46 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:24:46 
10:24:46 retrieve:
10:24:46 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:24:46 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:48 
10:24:48 prepare:
10:24:48 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
10:24:50 
10:24:50 release-clients:
10:24:50 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-531-5d9812eafd-ice36.zip
10:24:56 
10:24:56 release-zip:
10:24:56 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-531-5d9812eafd-ice36.zip
10:25:08 
10:25:08 BUILD SUCCESSFUL
10:25:08 Total time: 1 minute 34 seconds
10:25:08 ++ '[' -d .git ']'
10:25:08 ++ python3 ./build.py release-src
10:25:08 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
10:25:08 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
10:25:08 
10:25:08 release-src-git:
10:25:08 Releasing openmicroscopy-5.6.3-531-5d9812eafd-ice36
10:25:11   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-5d9812eafd-ice36.zip
10:25:11   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-5d9812eafd-ice36-base.zip
10:25:12 
10:25:12 BUILD SUCCESSFUL
10:25:12 Total time: 4 seconds
10:25:12 ++ echo BUILD_NUMBER=291
10:25:12 ++ echo OMERO_BRANCH=merge_ci
10:25:12 ++ git_info
10:25:12 +++ git rev-parse HEAD
10:25:12 ++ HEAD=5d9812eafd9e1f09abcbef3acb26ecf878681f5c
10:25:12 ++ git log --max-count=1 5d9812eafd9e1f09abcbef3acb26ecf878681f5c
10:25:12 ++ env
10:25:12 ++ sort
10:25:13 Archiving artifacts
10:25:40 Finished: SUCCESS