10:23:12Started by upstream project "Trigger" build number 34110:23:12originally caused by:
10:23:12 Started by user devspace10:23:12Running as SYSTEM
10:23:12Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
10:23:12The recommended git tool is: NONE
10:23:12No credentials specified
10:23:12 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
10:23:12Fetching changes from the remote Git repository
10:23:12 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
10:23:12Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git10:23:12 > git --version # timeout=10
10:23:12 > git --version # 'git version 2.43.5'
10:23:12 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
10:23:19 > git rev-parse origin/merge_ci^{commit} # timeout=10
10:23:19Checking out Revision 5d9812eafd9e1f09abcbef3acb26ecf878681f5c (origin/merge_ci)
10:23:19 > git config core.sparsecheckout # timeout=10
10:23:19 > git checkout -f 5d9812eafd9e1f09abcbef3acb26ecf878681f5c # timeout=10
10:23:19Commit message: "Add version.properties to etc/omero.properties"
10:23:19 > git rev-list --no-walk c3854c45979990d5a481e7da53a3c1aed6776a87 # timeout=10
10:23:19Cleaning workspace
10:23:19 > git rev-parse --verify HEAD # timeout=10
10:23:19Resetting working tree
10:23:19 > git reset --hard # timeout=10
10:23:19 > git clean -fdx # timeout=10
10:23:20Copied 6 artifacts from "OMERO-python-superbuild-build" build number 28710:23:20[OMERO-build] $ /bin/bash -xe /tmp/jenkins14469509220195712157.sh
10:23:20+ mv omero-scripts/dist/omero_scripts-5.9.1.dev0.tar.gz .
10:23:20+ cd src
10:23:20+ export OMERO_BRANCH=merge_ci
10:23:20+ OMERO_BRANCH=merge_ci
10:23:20+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
10:23:20+ source /home/omero/settings.env
10:23:20++ OMERO_DB_HOST=pg
10:23:20++ OMERO_DB_USER=postgres
10:23:20++ OMERO_DB_PASS=
10:23:20++ OMERO_ROOT_PASS=omero
10:23:20++ OMERO_DATA_DIR=/OMERO
10:23:20++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
10:23:20+ python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
10:23:24+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl10:23:27Collecting zeroc-ice==3.6.5
10:23:28 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
10:23:30WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
10:23:30You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
10:23:30+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
10:23:30Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (75.8.0)
10:23:31Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.6)
10:23:32Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
10:23:32Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
10:23:32Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
10:23:32Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
10:23:32Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
10:23:32Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
10:23:32Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
10:23:32Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
10:23:32Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
10:23:32Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
10:23:32Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
10:23:32Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
10:23:32WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
10:23:32You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
10:23:32+ source docs/hudson/OMERO.sh
10:23:32++ set -e
10:23:32++ set -u
10:23:32++ set -x
10:23:32++ source docs/hudson/functions.sh
10:23:32++ echo Building merge_ci
10:23:32Building merge_ci
10:23:32++ python3 ./build.py build-dev release-all
10:23:32OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
10:23:33Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
10:23:3410:23:34check-ivy:
10:23:34Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
10:23:34Created dir: /home/omero/workspace/OMERO-build/src/target
10:23:35:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:23:35:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:23:3710:23:37build-scons:
10:23:37Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
10:23:37No sub-builds to iterate on
10:23:38Entering /home/omero/workspace/OMERO-build/src/components/tools...
10:23:3810:23:38buildlist:
10:23:38:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:23:38:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:23:3810:23:38clean:
10:23:38Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:38Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:3910:23:39python-clean:
10:23:39WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:23:39/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-5d9812eafd-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:23:39 warnings.warn(
10:23:39running clean
10:23:39Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
10:23:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:23:3910:23:39python-clean:
10:23:39WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:23:39/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-5d9812eafd-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:23:39 warnings.warn(
10:23:39running clean
10:23:39Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
10:23:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:23:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:23:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:23:3910:23:39python-clean:
10:23:39WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:23:39/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-5d9812eafd-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:23:39 warnings.warn(
10:23:39running clean
10:23:40Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
10:23:40Deleting directory /home/omero/workspace/OMERO-build/src/target
10:23:4010:23:40build-scons:
10:23:40Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
10:23:4010:23:40build:
10:23:40No sub-builds to iterate on
10:23:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:23:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:23:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:23:4010:23:40tools-init:
10:23:40no-op
10:23:4010:23:40retrieve:
10:23:40:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:23:40:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:23:41WARNING: An illegal reflective access operation has occurred
10:23:41WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
10:23:41WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
10:23:41WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
10:23:41WARNING: All illegal access operations will be denied in a future release
10:24:1710:24:17prepare:
10:24:17Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
10:24:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
10:24:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
10:24:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:24:17Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:24:17Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:24:1710:24:17pre-compile:
10:24:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:24:1710:24:17compile:
10:24:17no-op
10:24:1710:24:17package:
10:24:17Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
10:24:1810:24:18install:
10:24:18:: delivering :: omero#omero_client;working@bdaf9f08f5d1 :: 5.6.3-531-5d9812eafd-ice36 :: integration :: Tue Jan 14 10:23:40 UTC 2025
10:24:18 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
10:24:18:: publishing :: omero#omero_client
10:24:18 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-5d9812eafd-ice36/omero_client-5.6.3-531-5d9812eafd-ice36.jar
10:24:18 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-5d9812eafd-ice36/omero_client-5.6.3-531-5d9812eafd-ice36.xml
10:24:18Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:18Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:1810:24:18retrieve:
10:24:18:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:24:18:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:19Entering /home/omero/workspace/OMERO-build/src/components/tools...
10:24:1910:24:19dist:
10:24:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
10:24:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
10:24:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
10:24:19Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.9.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
10:24:20Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
10:24:20Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
10:24:20Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
10:24:20Entering /home/omero/workspace/OMERO-build/src/components/tests...
10:24:20Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
10:24:2010:24:20copy-licenses:
10:24:20Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
10:24:20Created dir: /home/omero/workspace/OMERO-build/src/dist/share
10:24:20Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
10:24:2010:24:20copy-history:
10:24:20Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
10:24:2010:24:20copy-etc:
10:24:20Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
10:24:20Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
10:24:2010:24:20copy-sql:
10:24:20Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
10:24:2910:24:29copy-server:
10:24:29 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
10:24:3010:24:30copy-client:
10:24:30Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
10:24:31 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
10:24:3110:24:31update-version:
10:24:31Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
10:24:3110:24:31create-workdirs:
10:24:31Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
10:24:31Created dir: /home/omero/workspace/OMERO-build/src/dist/var
10:24:3110:24:31copy-luts:
10:24:31Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
10:24:31Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
10:24:3110:24:31test-compile:
10:24:31:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:31Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:24:32Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:32Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:24:32Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:24:32Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:24:32Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
10:24:32Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:24:3210:24:32testng-init:
10:24:32:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:24:32:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:3810:24:37,771 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
10:24:3810:24:37,774 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - No custom configurators were discovered as a service.
10:24:3810:24:37,774 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
10:24:3810:24:37,778 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
10:24:3810:24:37,778 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
10:24:3810:24:37,779 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
10:24:3810:24:37,780 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
10:24:3810:24:37,780 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
10:24:3810:24:37,781 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
10:24:3810:24:37,782 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
10:24:3810:24:37,782 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
10:24:3810:24:37,783 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ea6687b - Resource [logback.xml] occurs multiple times on the classpath.
10:24:3810:24:37,783 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ea6687b - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
10:24:3810:24:37,783 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ea6687b - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
10:24:3810:24:38,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
10:24:3810:24:38,006 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
10:24:3810:24:38,027 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
10:24:3810:24:38,029 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@5fdd9b96 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
10:24:3810:24:38,029 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@5fdd9b96 - Please move "immediateFlush" property into the enclosing appender.
10:24:3810:24:38,094 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@5fdd9b96 - Setting the "immediateFlush" property of the enclosing appender to true
10:24:3810:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
10:24:3810:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
10:24:3810:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
10:24:3810:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
10:24:3810:24:38,095 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
10:24:3810:24:38,095 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
10:24:3810:24:38,096 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@50ed6392 - End of configuration.
10:24:3810:24:38,098 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5ee29735 - Registering current configuration as safe fallback point
10:24:3810:24:38,098 |-INFO in ch.qos.logback.classic.util.ContextInitializer@70bfc7d5 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 317 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
10:24:3810:24:38lifecycle.test-compile:
10:24:38Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:24:38Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:24:38warning: [options] bootstrap class path not set in conjunction with -source 8
10:24:41/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:41import omero.grid.RawAccessRequest;
10:24:41 ^
10:24:41/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:41import omero.grid.RawAccessRequest;
10:24:41 ^
10:24:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:42import omero.grid.RawAccessRequest;
10:24:42 ^
10:24:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:42import omero.model.ImportJob;
10:24:42 ^
10:24:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:24:42import omero.model.ImportJobI;
10:24:42 ^
10:24:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
10:24:42 IObject link = (IObject) linkClass.newInstance();
10:24:42 ^
10:24:42 where T is a type-variable:
10:24:42 T extends Object declared in class Class
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
10:24:43 T copy = (T) obj.getClass().newInstance();
10:24:43 ^
10:24:43 where T is a type-variable:
10:24:43 T extends Object declared in class Class
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:43 RawAccessRequest raw = new RawAccessRequest();
10:24:43 ^
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:43 RawAccessRequest raw = new RawAccessRequest();
10:24:43 ^
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:24:43 raw.repoUuid = legacy.root().getHash().getValue();
10:24:43 ^
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
10:24:43 raw.command = "rm";
10:24:43 ^
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
10:24:43 raw.args = Arrays.asList(path);
10:24:43 ^
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
10:24:43 final IObject link = linkClass.newInstance();
10:24:43 ^
10:24:43 where T is a type-variable:
10:24:43 T extends Object declared in class Class
10:24:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
10:24:43 originalLink.setChild(annotationClass.newInstance());
10:24:43 ^
10:24:43 where T is a type-variable:
10:24:43 T extends Object declared in class Class
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:24:44 RoiResult r = svc.findByImage(id, new RoiOptions());
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44 final RawAccessRequest request = new RawAccessRequest();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44 final RawAccessRequest request = new RawAccessRequest();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:24:44 request.repoUuid = repo.root().getHash().getValue();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
10:24:44 request.command = "exists";
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
10:24:44 request.args = Collections.singletonList(dirPath);
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44 final RawAccessRequest request = new RawAccessRequest();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:24:44 final RawAccessRequest request = new RawAccessRequest();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:24:44 request.repoUuid = repo.root().getHash().getValue();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
10:24:44 request.command = "exists";
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
10:24:44 request.args = Collections.singletonList(dirName);
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44 final ImportJob importJob = new ImportJobI();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:24:44 final ImportJob importJob = new ImportJobI();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
10:24:44 importJob.setImageName(omero.rtypes.rstring(name));
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
10:24:44 importJob.setImageDescription(omero.rtypes.rstring(desc));
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:24:44 final String savedName = sent.getImageName().getValue().toString();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:24:44 final String savedDesc = sent.getImageDescription().getValue().toString();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:24:44 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:24:44 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
10:24:44 ^
10:24:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:24:44 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
10:24:44 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 RoiResult r = svc.findByImage(image.getId().getValue(),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
10:24:45 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
10:24:45 table = svc.getTable(f.getId().getValue());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 RoiResult r = svc.findByImage(image.getId().getValue(),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:24:45 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:24:45 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
10:24:45 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
10:24:45 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:24:45 svc.getShapeStatsRestricted(
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:24:45 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45 request.typesToIgnore = Collections.singletonList("TagAnnotation");
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45 request.typesToIgnore = Collections.singletonList("Annotation");
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:24:45 request.typesToIgnore = Collections.singletonList("Annotation");
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45 p2.setRelatedTo(p1);
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45 pixels1.setRelatedTo(pixels2);
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45 Pixels pixels = pixels1.getRelatedTo();
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45 Assert.assertNull(pixels1.getRelatedTo());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:24:45 pixels1.setRelatedTo(pixels2);
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45 Pixels pixels = pixels1.getRelatedTo();
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:24:45 Assert.assertNull(pixels1.getRelatedTo());
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:24:45 ^
10:24:45/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:24:45 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:24:45 ^
10:24:45Note: Some input files use unchecked or unsafe operations.
10:24:45Note: Recompile with -Xlint:unchecked for details.
10:24:4588 warnings
10:24:45Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1574017291.tmp
10:24:45Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
10:24:45:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:45:: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-531-5d9812eafd-ice36 :: integration :: Tue Jan 14 10:24:32 UTC 2025
10:24:45 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
10:24:45:: publishing :: omero#OmeroJava-test
10:24:45 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-5d9812eafd-ice36.jar
10:24:45 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-5d9812eafd-ice36.xml
10:24:4510:24:45build-eclipse:
10:24:45No sub-builds to iterate on
10:24:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:24:4610:24:46retrieve:
10:24:46:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:24:46:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:24:4810:24:48prepare:
10:24:48Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
10:24:5010:24:50release-clients:
10:24:50Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-531-5d9812eafd-ice36.zip
10:24:5610:24:56release-zip:
10:24:56Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-531-5d9812eafd-ice36.zip
10:25:0810:25:08BUILD SUCCESSFUL
10:25:08Total time: 1 minute 34 seconds
10:25:08++ '[' -d .git ']'
10:25:08++ python3 ./build.py release-src
10:25:08OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
10:25:08Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
10:25:0810:25:08release-src-git:
10:25:08Releasing openmicroscopy-5.6.3-531-5d9812eafd-ice36
10:25:11 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-5d9812eafd-ice36.zip
10:25:11 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-5d9812eafd-ice36-base.zip
10:25:1210:25:12BUILD SUCCESSFUL
10:25:12Total time: 4 seconds
10:25:12++ echo BUILD_NUMBER=291
10:25:12++ echo OMERO_BRANCH=merge_ci
10:25:12++ git_info
10:25:12+++ git rev-parse HEAD
10:25:12++ HEAD=5d9812eafd9e1f09abcbef3acb26ecf878681f5c
10:25:12++ git log --max-count=1 5d9812eafd9e1f09abcbef3acb26ecf878681f5c
10:25:12++ env
10:25:12++ sort
10:25:13Archiving artifacts
10:25:40Finished: SUCCESS