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+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-06 00:58:24,114 [  scc.config] DEBUG Found github.token
2024-09-06 00:58:24,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-06 00:58:24,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:24,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:25,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-06 00:58:25,067 [      scc.gh] DEBUG 2464 remaining from 5000 (Reset at 01:09
2024-09-06 00:58:25,068 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-06 00:58:25,072 [     scc.git] DEBUG Check current status
2024-09-06 00:58:25,072 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-06 00:58:25,076 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-06 00:58:25,076 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-06 00:58:25,120 [  scc.config] DEBUG Found remote.origin.url
2024-09-06 00:58:25,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-06 00:58:25,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-06 00:58:26,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-06 00:58:26,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-06 00:58:27,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-06 00:58:27,155 [     scc.git] DEBUG Resetting...
2024-09-06 00:58:27,155 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-06 00:58:27,173 [     scc.git] DEBUG HEAD is now at efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-06 00:58:27,173 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-06 00:58:27,211 [     scc.git] DEBUG Check current status
2024-09-06 00:58:27,211 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-06 00:58:27,215 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-06 00:58:27,216 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-06 00:58:27,260 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-06 00:58:27,260 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-06 00:58:27,261 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-06 00:58:27,261 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-06 00:58:27,261 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-06 00:58:27,261 [    scc.repo] DEBUG ## PRs found:
2024-09-06 00:58:27,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-06 00:58:28,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-06 00:58:28,249 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-06 00:58:28,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-06 00:58:29,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-06 00:58:29,120 [    scc.repo] DEBUG   - PR 445 dominikl 'Bump gateway'
2024-09-06 00:58:29,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-06 00:58:30,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-06 00:58:30,015 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-06 00:58:30,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-06 00:58:30,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-06 00:58:31,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-06 00:58:31,407 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-06 00:58:31,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-06 00:58:32,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-06 00:58:32,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-06 00:58:33,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-06 00:58:33,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-06 00:58:33,669 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-06 00:58:34,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-06 00:58:34,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-06 00:58:34,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-06 00:58:35,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-06 00:58:35,581 [    scc.repo] DEBUG ## Branches found:
2024-09-06 00:58:35,581 [     scc.git] DEBUG Get sha1 of %s
2024-09-06 00:58:35,581 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:35,589 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-06 00:58:35,595 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-06 00:58:35,596 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-06 00:58:35,601 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-06 00:58:35,606 [     scc.git] DEBUG Already up to date.

2024-09-06 00:58:35,606 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-06 00:58:36,022 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:58:36,022 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-06 00:58:36,028 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-06 00:58:36,458 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:58:36,459 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-06 00:58:36,464 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-06 00:58:36,837 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:58:36,837 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-06 00:58:36,842 [     scc.git] DEBUG Calling 'git fetch origin pull/445/head'
2024-09-06 00:58:37,154 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:58:37,155 [     scc.git] DEBUG  * branch                refs/pull/445/head -> FETCH_HEAD
2024-09-06 00:58:37,163 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-06 00:58:37,475 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:58:37,475 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-06 00:58:37,480 [     scc.git] DEBUG ## Unique users: []
2024-09-06 00:58:37,480 [     scc.git] DEBUG Get sha1 of %s
2024-09-06 00:58:37,480 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:37,485 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-06 00:58:37,491 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:37,495 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-06 00:58:37,631 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-06 00:58:37,634 [     scc.git] DEBUG  .../shoola/agents/measurement/view/ServerROITable.java      | 13 ++++++++++---
2024-09-06 00:58:37,634 [     scc.git] DEBUG  1 file changed, 10 insertions(+), 3 deletions(-)
2024-09-06 00:58:37,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:37,767 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-06 00:58:37,773 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:37,777 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-06 00:58:37,885 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-06 00:58:37,888 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/svc/proxy/MessengerRequest.java    | 4 +---
2024-09-06 00:58:37,888 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 3 deletions(-)
2024-09-06 00:58:38,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:38,145 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-06 00:58:38,151 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:38,155 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-06 00:58:38,283 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-06 00:58:38,287 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/env/data/DataServicesFactory.java    | 2 +-
2024-09-06 00:58:38,287 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-06 00:58:38,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:38,531 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-06 00:58:38,540 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:38,546 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 445 (Bump gateway) f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-06 00:58:38,586 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-06 00:58:38,589 [     scc.git] DEBUG  build.gradle | 2 +-
2024-09-06 00:58:38,589 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-06 00:58:38,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:38,913 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-06 00:58:38,920 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:38,925 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-06 00:58:38,967 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-06 00:58:38,970 [     scc.git] DEBUG  CHANGELOG.md | 10 +++++++++-
2024-09-06 00:58:38,970 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 1 deletion(-)
2024-09-06 00:58:39,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:39,289 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-06 00:58:39,330 [     scc.git] DEBUG Get sha1 of %s
2024-09-06 00:58:39,330 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:58:39,338 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-06 00:58:39,373 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f4c312a7e20> has no local changes
2024-09-06 00:58:39,373 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-insight
Excluded PRs:
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 445 dominikl 'Bump gateway'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#164 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/164/)'
2024-09-06 00:58:39,386 [     scc.git] DEBUG [detached HEAD cfc08ba85] merge master -Dorg -Snone
2024-09-06 00:58:39,387 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-06 00:58:39,387 [   scc.merge] INFO  Excluded PRs:
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-06 00:58:39,387 [   scc.merge] INFO  Already up to date.
2024-09-06 00:58:39,387 [   scc.merge] INFO  
2024-09-06 00:58:39,387 [   scc.merge] INFO  Merged PRs:
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway'
2024-09-06 00:58:39,387 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-06 00:58:39,387 [   scc.merge] INFO  
2024-09-06 00:58:39,387 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-06 00:58:39,387 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2024-09-06 00:58:40,126 [  scc.config] DEBUG Found github.token
2024-09-06 00:58:40,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-06 00:58:40,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:40,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:58:41,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-06 00:58:41,095 [      scc.gh] DEBUG 2398 remaining from 5000 (Reset at 01:09
2024-09-06 00:58:41,096 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-06 00:58:41,100 [     scc.git] DEBUG Check current status
2024-09-06 00:58:41,100 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-06 00:58:41,104 [     scc.git] DEBUG cfc08ba85 merge master -Dorg -Snone
2024-09-06 00:58:41,105 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-06 00:58:41,149 [  scc.config] DEBUG Found remote.origin.url
2024-09-06 00:58:41,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-06 00:58:42,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-06 00:58:42,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-06 00:58:42,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-06 00:58:43,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-06 00:58:43,303 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-06 00:58:43,354 [     scc.git] DEBUG Resetting...
2024-09-06 00:58:43,355 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-06 00:58:43,372 [     scc.git] DEBUG HEAD is now at cfc08ba85 merge master -Dorg -Snone
2024-09-06 00:58:43,373 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-06 00:58:43,421 [     scc.git] DEBUG Check current status
2024-09-06 00:58:43,421 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-06 00:58:43,426 [     scc.git] DEBUG cfc08ba85 merge master -Dorg -Snone
2024-09-06 00:58:43,426 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-06 00:58:43,472 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-06 00:58:43,472 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-06 00:58:43,472 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-06 00:58:43,472 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-06 00:58:43,472 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-06 00:58:43,472 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-09-06 00:58:43,472 [    scc.repo] DEBUG ## PRs found:
2024-09-06 00:58:43,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-06 00:58:44,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-06 00:58:44,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-06 00:58:45,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-06 00:58:45,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-06 00:58:46,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-06 00:58:46,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/dff7f109472118e0a3ef88bf89467402d9cbfa93?per_page=1 HTTP/1.1" 200 None
2024-09-06 00:58:46,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-06 00:58:47,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/status HTTP/1.1" 200 None
2024-09-06 00:58:47,361 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-06 00:58:47,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-06 00:58:48,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-06 00:58:49,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b HTTP/1.1" 200 None
2024-09-06 00:58:49,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-06 00:58:50,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-06 00:58:50,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-06 00:58:50,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-06 00:58:51,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-06 00:58:51,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-06 00:58:52,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-06 00:58:52,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-06 00:58:53,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/2c097b44fcac5cd272b1c0a05a7336d988b5c65b?per_page=1 HTTP/1.1" 200 None
2024-09-06 00:58:53,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-06 00:58:54,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/status HTTP/1.1" 200 None
2024-09-06 00:58:54,119 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-06 00:58:54,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-06 00:58:55,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-06 00:58:55,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-06 00:58:55,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-06 00:58:56,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-06 00:58:56,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-06 00:58:57,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-06 00:58:57,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9f3d273acb87527eed99aedd868bf0a4ec1b5861?per_page=1 HTTP/1.1" 200 None
2024-09-06 00:58:58,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-06 00:58:58,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/status HTTP/1.1" 200 None
2024-09-06 00:58:58,651 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-06 00:58:59,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-06 00:58:59,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-06 00:58:59,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-06 00:59:00,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-06 00:59:00,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-06 00:59:01,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-06 00:59:01,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-06 00:59:02,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-06 00:59:02,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-06 00:59:03,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9466472925265b0b02b7c054c55d62705a9b8215?per_page=1 HTTP/1.1" 200 None
2024-09-06 00:59:03,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-06 00:59:04,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/status HTTP/1.1" 200 None
2024-09-06 00:59:04,028 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-06 00:59:04,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-06 00:59:04,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-06 00:59:05,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-06 00:59:05,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-06 00:59:05,927 [    scc.repo] DEBUG ## Branches found:
2024-09-06 00:59:05,927 [     scc.git] DEBUG Get sha1 of %s
2024-09-06 00:59:05,927 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:59:05,932 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-06 00:59:05,937 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-06 00:59:05,937 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-06 00:59:05,942 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-06 00:59:05,949 [     scc.git] DEBUG Already up to date.

2024-09-06 00:59:05,950 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-06 00:59:06,317 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:59:06,318 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-06 00:59:06,324 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-06 00:59:06,622 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:59:06,622 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-06 00:59:06,627 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-06 00:59:06,915 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:59:06,915 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-06 00:59:06,920 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-06 00:59:07,247 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-06 00:59:07,247 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-06 00:59:07,254 [     scc.git] DEBUG ## Unique users: []
2024-09-06 00:59:07,254 [     scc.git] DEBUG Get sha1 of %s
2024-09-06 00:59:07,254 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:59:07,259 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-06 00:59:07,266 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:59:07,270 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-06 00:59:07,277 [     scc.git] DEBUG Already up to date.
2024-09-06 00:59:07,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:59:07,406 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-06 00:59:07,413 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:59:07,418 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-06 00:59:07,424 [     scc.git] DEBUG Already up to date.
2024-09-06 00:59:07,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:59:07,792 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-06 00:59:07,801 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:59:07,807 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-06 00:59:07,814 [     scc.git] DEBUG Already up to date.
2024-09-06 00:59:08,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:59:08,186 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-06 00:59:08,194 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:59:08,198 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-06 00:59:08,204 [     scc.git] DEBUG Already up to date.
2024-09-06 00:59:08,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-06 00:59:08,566 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-06 00:59:08,608 [     scc.git] DEBUG Get sha1 of %s
2024-09-06 00:59:08,608 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-06 00:59:08,612 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-06 00:59:08,664 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-06 00:59:08,677 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f94050bbe20> has no local changes
2024-09-06 00:59:08,677 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-insight
Excluded PRs:
  - PR 445 dominikl 'Bump gateway' (status: cancelled)
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#164 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/164/)'
2024-09-06 00:59:08,691 [     scc.git] DEBUG [detached HEAD a8aecfac8] merge master -Dorg -Ssuccess-only
2024-09-06 00:59:08,691 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-06 00:59:08,691 [   scc.merge] INFO  Excluded PRs:
2024-09-06 00:59:08,691 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway' (status: cancelled)
2024-09-06 00:59:08,691 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-06 00:59:08,691 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-06 00:59:08,691 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-06 00:59:08,691 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-06 00:59:08,691 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-06 00:59:08,691 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-06 00:59:08,691 [   scc.merge] INFO  Already up to date.
2024-09-06 00:59:08,691 [   scc.merge] INFO  
2024-09-06 00:59:08,691 [   scc.merge] INFO  Merged PRs:
2024-09-06 00:59:08,692 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-06 00:59:08,692 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-06 00:59:08,692 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-06 00:59:08,692 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-06 00:59:08,692 [   scc.merge] INFO  
2024-09-06 00:59:08,692 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-06 00:59:08,692 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.3 to 5.9.4-SNAPSHOT
Commit all component version changes
[detached HEAD fb98e45bb] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-06 00:59:14,888 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci