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Started by upstream project "Trigger" build number 199
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-insight-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-insight-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-insight-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-insight.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-insight.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.3'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-insight.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision efbf7e35ce95c195c753051f26f92a075e8b5dd3 (refs/remotes/origin/master)
Commit message: "Bump version: 5.8.4 → 5.8.5-SNAPSHOT"
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f efbf7e35ce95c195c753051f26f92a075e8b5dd3 # timeout=10
 > git rev-list --no-walk efbf7e35ce95c195c753051f26f92a075e8b5dd3 # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 175
[Pipeline] sh
+ pushd build
~/workspace/OMERO-insight-push/build ~/workspace/OMERO-insight-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-insight-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-24.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-24.2
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.8-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.8.30-py3-none-any.whl (167 kB)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB)
Using cached idna-3.8-py3-none-any.whl (66 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.8 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-08 00:55:20,420 [  scc.config] DEBUG Found github.token
2024-09-08 00:55:20,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-08 00:55:20,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:20,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:21,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-08 00:55:21,358 [      scc.gh] DEBUG 3062 remaining from 5000 (Reset at 01:09
2024-09-08 00:55:21,359 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-08 00:55:21,363 [     scc.git] DEBUG Check current status
2024-09-08 00:55:21,363 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-08 00:55:21,367 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-08 00:55:21,368 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-08 00:55:21,415 [  scc.config] DEBUG Found remote.origin.url
2024-09-08 00:55:21,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-08 00:55:22,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-08 00:55:22,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-08 00:55:23,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-08 00:55:23,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-08 00:55:23,460 [     scc.git] DEBUG Resetting...
2024-09-08 00:55:23,460 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-08 00:55:23,480 [     scc.git] DEBUG HEAD is now at efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-08 00:55:23,481 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-08 00:55:23,524 [     scc.git] DEBUG Check current status
2024-09-08 00:55:23,525 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-08 00:55:23,531 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-08 00:55:23,532 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-08 00:55:23,574 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-08 00:55:23,574 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-08 00:55:23,575 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-08 00:55:23,575 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-08 00:55:23,575 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-08 00:55:23,575 [    scc.repo] DEBUG ## PRs found:
2024-09-08 00:55:24,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-08 00:55:24,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-08 00:55:24,577 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-08 00:55:25,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-08 00:55:25,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-08 00:55:25,505 [    scc.repo] DEBUG   - PR 445 dominikl 'Bump gateway'
2024-09-08 00:55:25,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-08 00:55:26,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-08 00:55:26,372 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-08 00:55:26,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-08 00:55:27,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-08 00:55:27,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-08 00:55:27,698 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-08 00:55:28,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-08 00:55:28,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-08 00:55:29,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-08 00:55:29,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-08 00:55:29,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-08 00:55:29,890 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-08 00:55:30,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-08 00:55:30,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-08 00:55:31,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-08 00:55:31,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-08 00:55:31,733 [    scc.repo] DEBUG ## Branches found:
2024-09-08 00:55:31,734 [     scc.git] DEBUG Get sha1 of %s
2024-09-08 00:55:31,734 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:31,741 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-08 00:55:31,748 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-08 00:55:31,749 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-08 00:55:31,756 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-08 00:55:31,764 [     scc.git] DEBUG Already up to date.

2024-09-08 00:55:31,765 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-08 00:55:32,208 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:55:32,209 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-08 00:55:32,218 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-08 00:55:32,683 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:55:32,683 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-08 00:55:32,689 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-08 00:55:33,136 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:55:33,137 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-08 00:55:33,143 [     scc.git] DEBUG Calling 'git fetch origin pull/445/head'
2024-09-08 00:55:33,486 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:55:33,487 [     scc.git] DEBUG  * branch                refs/pull/445/head -> FETCH_HEAD
2024-09-08 00:55:33,493 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-08 00:55:33,835 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:55:33,835 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-08 00:55:33,843 [     scc.git] DEBUG ## Unique users: []
2024-09-08 00:55:33,843 [     scc.git] DEBUG Get sha1 of %s
2024-09-08 00:55:33,843 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:33,849 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-08 00:55:33,855 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:33,859 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-08 00:55:34,068 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-08 00:55:34,072 [     scc.git] DEBUG  .../shoola/agents/measurement/view/ServerROITable.java      | 13 ++++++++++---
2024-09-08 00:55:34,072 [     scc.git] DEBUG  1 file changed, 10 insertions(+), 3 deletions(-)
2024-09-08 00:55:34,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:34,207 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-08 00:55:34,215 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:34,220 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-08 00:55:34,515 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-08 00:55:34,518 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/svc/proxy/MessengerRequest.java    | 4 +---
2024-09-08 00:55:34,518 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 3 deletions(-)
2024-09-08 00:55:34,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:34,658 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-08 00:55:34,665 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:34,670 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-08 00:55:34,842 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-08 00:55:34,846 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/env/data/DataServicesFactory.java    | 2 +-
2024-09-08 00:55:34,846 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-08 00:55:35,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:35,037 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-08 00:55:35,045 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:35,049 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 445 (Bump gateway) f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-08 00:55:35,114 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-08 00:55:35,117 [     scc.git] DEBUG  build.gradle | 2 +-
2024-09-08 00:55:35,117 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-08 00:55:35,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:35,424 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-08 00:55:35,431 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:35,435 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-08 00:55:35,479 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-08 00:55:35,483 [     scc.git] DEBUG  CHANGELOG.md | 10 +++++++++-
2024-09-08 00:55:35,483 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 1 deletion(-)
2024-09-08 00:55:35,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:35,802 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-08 00:55:35,844 [     scc.git] DEBUG Get sha1 of %s
2024-09-08 00:55:35,845 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:55:35,849 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-08 00:55:35,886 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5544517e50> has no local changes
2024-09-08 00:55:35,887 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-insight
Excluded PRs:
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 445 dominikl 'Bump gateway'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#166 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/166/)'
2024-09-08 00:55:35,900 [     scc.git] DEBUG [detached HEAD 1395ea564] merge master -Dorg -Snone
2024-09-08 00:55:35,900 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-08 00:55:35,900 [   scc.merge] INFO  Excluded PRs:
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-08 00:55:35,900 [   scc.merge] INFO  Already up to date.
2024-09-08 00:55:35,900 [   scc.merge] INFO  
2024-09-08 00:55:35,900 [   scc.merge] INFO  Merged PRs:
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-08 00:55:35,900 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-08 00:55:35,901 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway'
2024-09-08 00:55:35,901 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-08 00:55:35,901 [   scc.merge] INFO  
2024-09-08 00:55:35,901 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-08 00:55:35,901 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2024-09-08 00:55:36,500 [  scc.config] DEBUG Found github.token
2024-09-08 00:55:36,503 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-08 00:55:36,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:37,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:55:37,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-08 00:55:37,431 [      scc.gh] DEBUG 2996 remaining from 5000 (Reset at 01:09
2024-09-08 00:55:37,433 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-08 00:55:37,437 [     scc.git] DEBUG Check current status
2024-09-08 00:55:37,438 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-08 00:55:37,442 [     scc.git] DEBUG 1395ea564 merge master -Dorg -Snone
2024-09-08 00:55:37,442 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-08 00:55:37,492 [  scc.config] DEBUG Found remote.origin.url
2024-09-08 00:55:37,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-08 00:55:38,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-08 00:55:38,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-08 00:55:39,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-08 00:55:39,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-08 00:55:39,512 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-08 00:55:39,553 [     scc.git] DEBUG Resetting...
2024-09-08 00:55:39,554 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-08 00:55:39,573 [     scc.git] DEBUG HEAD is now at 1395ea564 merge master -Dorg -Snone
2024-09-08 00:55:39,574 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-08 00:55:39,618 [     scc.git] DEBUG Check current status
2024-09-08 00:55:39,619 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-08 00:55:39,624 [     scc.git] DEBUG 1395ea564 merge master -Dorg -Snone
2024-09-08 00:55:39,624 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-08 00:55:39,678 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-08 00:55:39,678 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-08 00:55:39,678 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-08 00:55:39,678 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-08 00:55:39,678 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-08 00:55:39,678 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-09-08 00:55:39,678 [    scc.repo] DEBUG ## PRs found:
2024-09-08 00:55:40,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-08 00:55:40,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-08 00:55:40,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-08 00:55:41,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:41,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-08 00:55:42,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-08 00:55:42,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/dff7f109472118e0a3ef88bf89467402d9cbfa93?per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:43,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-08 00:55:43,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/status HTTP/1.1" 200 None
2024-09-08 00:55:43,594 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-08 00:55:44,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-08 00:55:44,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-08 00:55:44,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b HTTP/1.1" 200 None
2024-09-08 00:55:45,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:45,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-08 00:55:46,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-08 00:55:46,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-08 00:55:47,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-08 00:55:47,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:48,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-08 00:55:48,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-08 00:55:49,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/2c097b44fcac5cd272b1c0a05a7336d988b5c65b?per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:49,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-08 00:55:49,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/status HTTP/1.1" 200 None
2024-09-08 00:55:49,910 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-08 00:55:50,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-08 00:55:50,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-08 00:55:51,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-08 00:55:51,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-08 00:55:52,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:52,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-08 00:55:53,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-08 00:55:53,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9f3d273acb87527eed99aedd868bf0a4ec1b5861?per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:54,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-08 00:55:54,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/status HTTP/1.1" 200 None
2024-09-08 00:55:54,540 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-08 00:55:54,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-08 00:55:55,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-08 00:55:55,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-08 00:55:56,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-08 00:55:56,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-08 00:55:57,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-08 00:55:57,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:58,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-08 00:55:58,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-08 00:55:59,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9466472925265b0b02b7c054c55d62705a9b8215?per_page=1 HTTP/1.1" 200 None
2024-09-08 00:55:59,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-08 00:55:59,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/status HTTP/1.1" 200 None
2024-09-08 00:55:59,924 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-08 00:56:00,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-08 00:56:00,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-08 00:56:01,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-08 00:56:01,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-08 00:56:01,750 [    scc.repo] DEBUG ## Branches found:
2024-09-08 00:56:01,750 [     scc.git] DEBUG Get sha1 of %s
2024-09-08 00:56:01,750 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:56:01,757 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-08 00:56:01,761 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-08 00:56:01,762 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-08 00:56:01,767 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-08 00:56:01,774 [     scc.git] DEBUG Already up to date.

2024-09-08 00:56:01,774 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-08 00:56:02,100 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:56:02,101 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-08 00:56:02,126 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-08 00:56:02,407 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:56:02,407 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-08 00:56:02,412 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-08 00:56:02,717 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:56:02,718 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-08 00:56:02,725 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-08 00:56:03,009 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-08 00:56:03,009 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-08 00:56:03,016 [     scc.git] DEBUG ## Unique users: []
2024-09-08 00:56:03,016 [     scc.git] DEBUG Get sha1 of %s
2024-09-08 00:56:03,017 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:56:03,023 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-08 00:56:03,031 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:56:03,036 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-08 00:56:03,043 [     scc.git] DEBUG Already up to date.
2024-09-08 00:56:03,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:56:03,178 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-08 00:56:03,185 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:56:03,190 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-08 00:56:03,196 [     scc.git] DEBUG Already up to date.
2024-09-08 00:56:03,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:56:03,556 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-08 00:56:03,563 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:56:03,568 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-08 00:56:03,574 [     scc.git] DEBUG Already up to date.
2024-09-08 00:56:03,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:56:03,942 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-08 00:56:03,949 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:56:03,955 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-08 00:56:03,963 [     scc.git] DEBUG Already up to date.
2024-09-08 00:56:04,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-08 00:56:04,331 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-08 00:56:04,376 [     scc.git] DEBUG Get sha1 of %s
2024-09-08 00:56:04,376 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-08 00:56:04,381 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-08 00:56:04,425 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-08 00:56:04,436 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f60759c4e50> has no local changes
2024-09-08 00:56:04,437 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-insight
Excluded PRs:
  - PR 445 dominikl 'Bump gateway' (status: cancelled)
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#166 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/166/)'
2024-09-08 00:56:04,462 [     scc.git] DEBUG [detached HEAD 7bdd155a8] merge master -Dorg -Ssuccess-only
2024-09-08 00:56:04,462 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-08 00:56:04,462 [   scc.merge] INFO  Excluded PRs:
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway' (status: cancelled)
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-08 00:56:04,462 [   scc.merge] INFO  Already up to date.
2024-09-08 00:56:04,462 [   scc.merge] INFO  
2024-09-08 00:56:04,462 [   scc.merge] INFO  Merged PRs:
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-08 00:56:04,462 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-08 00:56:04,462 [   scc.merge] INFO  
2024-09-08 00:56:04,463 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-08 00:56:04,463 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.3 to 5.9.4-SNAPSHOT
Commit all component version changes
[detached HEAD 7304f8a7a] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-08 00:56:10,743 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS