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+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-09 00:59:49,473 [  scc.config] DEBUG Found github.token
2024-09-09 00:59:49,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-09 00:59:49,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 00:59:50,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 00:59:50,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-09 00:59:50,405 [      scc.gh] DEBUG 2136 remaining from 5000 (Reset at 01:09
2024-09-09 00:59:50,407 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-09 00:59:50,412 [     scc.git] DEBUG Check current status
2024-09-09 00:59:50,412 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-09 00:59:50,417 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-09 00:59:50,418 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-09 00:59:50,467 [  scc.config] DEBUG Found remote.origin.url
2024-09-09 00:59:50,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-09 00:59:51,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-09 00:59:51,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-09 00:59:52,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-09 00:59:52,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-09 00:59:52,536 [     scc.git] DEBUG Resetting...
2024-09-09 00:59:52,536 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-09 00:59:52,555 [     scc.git] DEBUG HEAD is now at efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-09 00:59:52,556 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-09 00:59:52,600 [     scc.git] DEBUG Check current status
2024-09-09 00:59:52,601 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-09 00:59:52,606 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-09 00:59:52,606 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-09 00:59:52,650 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-09 00:59:52,650 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-09 00:59:52,650 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-09 00:59:52,650 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-09 00:59:52,650 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-09 00:59:52,651 [    scc.repo] DEBUG ## PRs found:
2024-09-09 00:59:53,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-09 00:59:53,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-09 00:59:53,575 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-09 00:59:53,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-09 00:59:54,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-09 00:59:54,423 [    scc.repo] DEBUG   - PR 445 dominikl 'Bump gateway'
2024-09-09 00:59:54,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-09 00:59:55,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-09 00:59:55,297 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-09 00:59:55,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-09 00:59:56,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-09 00:59:56,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-09 00:59:56,662 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-09 00:59:57,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-09 00:59:57,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-09 00:59:58,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-09 00:59:58,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-09 00:59:58,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-09 00:59:58,914 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-09 00:59:59,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-09 00:59:59,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-09 01:00:00,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-09 01:00:00,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-09 01:00:00,772 [    scc.repo] DEBUG ## Branches found:
2024-09-09 01:00:00,773 [     scc.git] DEBUG Get sha1 of %s
2024-09-09 01:00:00,773 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:00,778 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-09 01:00:00,783 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-09 01:00:00,783 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-09 01:00:00,789 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-09 01:00:01,325 [     scc.git] DEBUG Already up to date.

2024-09-09 01:00:01,325 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-09 01:00:01,925 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:01,926 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-09 01:00:01,931 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-09 01:00:02,316 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:02,316 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-09 01:00:02,322 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-09 01:00:02,757 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:02,757 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-09 01:00:02,762 [     scc.git] DEBUG Calling 'git fetch origin pull/445/head'
2024-09-09 01:00:03,076 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:03,076 [     scc.git] DEBUG  * branch                refs/pull/445/head -> FETCH_HEAD
2024-09-09 01:00:03,081 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-09 01:00:03,370 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:03,371 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-09 01:00:03,376 [     scc.git] DEBUG ## Unique users: []
2024-09-09 01:00:03,376 [     scc.git] DEBUG Get sha1 of %s
2024-09-09 01:00:03,376 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:03,381 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-09 01:00:03,387 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:03,392 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-09 01:00:03,530 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-09 01:00:03,533 [     scc.git] DEBUG  .../shoola/agents/measurement/view/ServerROITable.java      | 13 ++++++++++---
2024-09-09 01:00:03,533 [     scc.git] DEBUG  1 file changed, 10 insertions(+), 3 deletions(-)
2024-09-09 01:00:03,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:03,676 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-09 01:00:03,688 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:03,696 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-09 01:00:03,839 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-09 01:00:03,842 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/svc/proxy/MessengerRequest.java    | 4 +---
2024-09-09 01:00:03,842 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 3 deletions(-)
2024-09-09 01:00:04,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:04,070 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-09 01:00:04,077 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:04,082 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-09 01:00:04,235 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-09 01:00:04,238 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/env/data/DataServicesFactory.java    | 2 +-
2024-09-09 01:00:04,238 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-09 01:00:04,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:04,455 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-09 01:00:04,462 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:04,466 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 445 (Bump gateway) f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-09 01:00:04,527 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-09 01:00:04,530 [     scc.git] DEBUG  build.gradle | 2 +-
2024-09-09 01:00:04,530 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-09 01:00:04,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:04,839 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-09 01:00:04,845 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:04,849 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-09 01:00:04,898 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-09 01:00:04,901 [     scc.git] DEBUG  CHANGELOG.md | 10 +++++++++-
2024-09-09 01:00:04,901 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 1 deletion(-)
2024-09-09 01:00:05,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:05,232 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-09 01:00:05,271 [     scc.git] DEBUG Get sha1 of %s
2024-09-09 01:00:05,271 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:05,275 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-09 01:00:05,320 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f35d1917e20> has no local changes
2024-09-09 01:00:05,321 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-insight
Excluded PRs:
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 445 dominikl 'Bump gateway'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#167 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/167/)'
2024-09-09 01:00:05,334 [     scc.git] DEBUG [detached HEAD 9b64e7ecd] merge master -Dorg -Snone
2024-09-09 01:00:05,335 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-09 01:00:05,335 [   scc.merge] INFO  Excluded PRs:
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-09 01:00:05,335 [   scc.merge] INFO  Already up to date.
2024-09-09 01:00:05,335 [   scc.merge] INFO  
2024-09-09 01:00:05,335 [   scc.merge] INFO  Merged PRs:
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway'
2024-09-09 01:00:05,335 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-09 01:00:05,335 [   scc.merge] INFO  
2024-09-09 01:00:05,335 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-09 01:00:05,335 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2024-09-09 01:00:05,830 [  scc.config] DEBUG Found github.token
2024-09-09 01:00:05,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-09 01:00:05,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:06,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:06,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-09 01:00:06,761 [      scc.gh] DEBUG 2096 remaining from 5000 (Reset at 01:09
2024-09-09 01:00:06,761 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-09 01:00:06,766 [     scc.git] DEBUG Check current status
2024-09-09 01:00:06,766 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-09 01:00:06,769 [     scc.git] DEBUG 9b64e7ecd merge master -Dorg -Snone
2024-09-09 01:00:06,770 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-09 01:00:06,811 [  scc.config] DEBUG Found remote.origin.url
2024-09-09 01:00:07,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-09 01:00:07,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-09 01:00:08,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-09 01:00:08,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-09 01:00:08,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-09 01:00:08,920 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-09 01:00:08,960 [     scc.git] DEBUG Resetting...
2024-09-09 01:00:08,960 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-09 01:00:08,977 [     scc.git] DEBUG HEAD is now at 9b64e7ecd merge master -Dorg -Snone
2024-09-09 01:00:08,977 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-09 01:00:09,018 [     scc.git] DEBUG Check current status
2024-09-09 01:00:09,018 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-09 01:00:09,022 [     scc.git] DEBUG 9b64e7ecd merge master -Dorg -Snone
2024-09-09 01:00:09,023 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-09 01:00:09,059 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-09 01:00:09,059 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-09 01:00:09,059 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-09 01:00:09,059 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-09 01:00:09,059 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-09 01:00:09,059 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-09-09 01:00:09,059 [    scc.repo] DEBUG ## PRs found:
2024-09-09 01:00:09,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-09 01:00:09,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-09 01:00:10,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-09 01:00:10,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:11,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-09 01:00:11,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-09 01:00:12,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/dff7f109472118e0a3ef88bf89467402d9cbfa93?per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:12,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-09 01:00:13,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/status HTTP/1.1" 200 None
2024-09-09 01:00:13,217 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-09 01:00:13,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-09 01:00:14,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-09 01:00:14,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b HTTP/1.1" 200 None
2024-09-09 01:00:15,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:15,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-09 01:00:15,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-09 01:00:16,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-09 01:00:16,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-09 01:00:17,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:17,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-09 01:00:18,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-09 01:00:18,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/2c097b44fcac5cd272b1c0a05a7336d988b5c65b?per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:19,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-09 01:00:19,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/status HTTP/1.1" 200 None
2024-09-09 01:00:19,609 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-09 01:00:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-09 01:00:20,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-09 01:00:20,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-09 01:00:21,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-09 01:00:21,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:22,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-09 01:00:22,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-09 01:00:23,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9f3d273acb87527eed99aedd868bf0a4ec1b5861?per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:23,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-09 01:00:24,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/status HTTP/1.1" 200 None
2024-09-09 01:00:24,126 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-09 01:00:24,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-09 01:00:25,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-09 01:00:25,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-09 01:00:25,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-09 01:00:26,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-09 01:00:26,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-09 01:00:27,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:27,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-09 01:00:28,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-09 01:00:28,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9466472925265b0b02b7c054c55d62705a9b8215?per_page=1 HTTP/1.1" 200 None
2024-09-09 01:00:29,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-09 01:00:29,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/status HTTP/1.1" 200 None
2024-09-09 01:00:29,488 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-09 01:00:29,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-09 01:00:30,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-09 01:00:30,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-09 01:00:31,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-09 01:00:31,353 [    scc.repo] DEBUG ## Branches found:
2024-09-09 01:00:31,353 [     scc.git] DEBUG Get sha1 of %s
2024-09-09 01:00:31,353 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:31,358 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-09 01:00:31,361 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-09 01:00:31,361 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-09 01:00:31,364 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-09 01:00:31,370 [     scc.git] DEBUG Already up to date.

2024-09-09 01:00:31,370 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-09 01:00:31,666 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:31,666 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-09 01:00:31,671 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-09 01:00:32,000 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:32,000 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-09 01:00:32,009 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-09 01:00:32,292 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:32,292 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-09 01:00:32,299 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-09 01:00:32,581 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-09 01:00:32,581 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-09 01:00:32,587 [     scc.git] DEBUG ## Unique users: []
2024-09-09 01:00:32,587 [     scc.git] DEBUG Get sha1 of %s
2024-09-09 01:00:32,587 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:32,591 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-09 01:00:32,597 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:32,602 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-09 01:00:32,608 [     scc.git] DEBUG Already up to date.
2024-09-09 01:00:32,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:32,738 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-09 01:00:32,746 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:32,752 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-09 01:00:32,758 [     scc.git] DEBUG Already up to date.
2024-09-09 01:00:33,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:33,133 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-09 01:00:33,165 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:33,174 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-09 01:00:33,181 [     scc.git] DEBUG Already up to date.
2024-09-09 01:00:33,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:33,522 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-09 01:00:33,531 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:33,535 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-09 01:00:33,542 [     scc.git] DEBUG Already up to date.
2024-09-09 01:00:33,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-09 01:00:33,895 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-09 01:00:33,944 [     scc.git] DEBUG Get sha1 of %s
2024-09-09 01:00:33,945 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-09 01:00:33,951 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-09 01:00:34,002 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-09 01:00:34,014 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f188d732e20> has no local changes
2024-09-09 01:00:34,015 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-insight
Excluded PRs:
  - PR 445 dominikl 'Bump gateway' (status: cancelled)
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#167 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/167/)'
2024-09-09 01:00:34,040 [     scc.git] DEBUG [detached HEAD f5633ada5] merge master -Dorg -Ssuccess-only
2024-09-09 01:00:34,040 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-09 01:00:34,040 [   scc.merge] INFO  Excluded PRs:
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway' (status: cancelled)
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-09 01:00:34,040 [   scc.merge] INFO  Already up to date.
2024-09-09 01:00:34,040 [   scc.merge] INFO  
2024-09-09 01:00:34,040 [   scc.merge] INFO  Merged PRs:
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-09 01:00:34,040 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-09 01:00:34,041 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-09 01:00:34,041 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-09 01:00:34,041 [   scc.merge] INFO  
2024-09-09 01:00:34,041 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-09 01:00:34,041 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.3 to 5.9.4-SNAPSHOT
Commit all component version changes
[detached HEAD 82c98fd14] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-09 01:00:39,944 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci