Started by upstream project "Trigger" build number 117 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor on ‘testintegration’ Running on testintegration in /home/omero/workspace/OMERO-insight-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-insight-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-insight-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-insight.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-insight.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-insight.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 050a7aef07b24c5c0b030ec48d0f2a8b674f8ee9 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 050a7aef07b24c5c0b030ec48d0f2a8b674f8ee9 # timeout=10 Commit message: "Merge pull request #488 from sbesson/omero-gateway_5.10.5" > git rev-list --no-walk 050a7aef07b24c5c0b030ec48d0f2a8b674f8ee9 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 98 [Pipeline] sh + pushd build ~/workspace/OMERO-insight-push/build ~/workspace/OMERO-insight-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-insight-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.15.1-py3-none-any.whl.metadata (3.5 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.4 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (46 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.20-py3-none-any.whl.metadata (7.2 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.10.0-py3-none-any.whl (455 kB) Using cached pyjwt-2.15.1-py3-none-any.whl (33 kB) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.8 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (269 kB) Using cached idna-3.20-py3-none-any.whl (69 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.2 cryptography-50.0.2 future-1.0.0 idna-3.20 pycparser-3.0 pyjwt-2.15.1 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-insight.git + BASE_REPO=omero-insight.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-10-03 00:27:39,038 [ scc.config] DEBUG Found github.token 2026-10-03 00:27:39,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-10-03 00:27:39,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:27:39,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:27:40,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-10-03 00:27:40,202 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 01:10 2026-10-03 00:27:40,203 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-03 00:27:40,218 [ scc.git] DEBUG Check current status 2026-10-03 00:27:40,219 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-03 00:27:40,256 [ scc.git] DEBUG 050a7aef0 Merge pull request #488 from sbesson/omero-gateway_5.10.5 2026-10-03 00:27:40,257 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-03 00:27:40,365 [ scc.config] DEBUG Found remote.origin.url 2026-10-03 00:27:40,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None 2026-10-03 00:27:41,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-03 00:27:41,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-03 00:27:42,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-03 00:27:42,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-03 00:27:42,844 [ scc.git] DEBUG Resetting... 2026-10-03 00:27:42,844 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-10-03 00:27:43,980 [ scc.git] DEBUG HEAD is now at 050a7aef0 Merge pull request #488 from sbesson/omero-gateway_5.10.5 2026-10-03 00:27:43,982 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-10-03 00:27:44,081 [ scc.git] DEBUG Check current status 2026-10-03 00:27:44,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-03 00:27:44,096 [ scc.git] DEBUG 050a7aef0 Merge pull request #488 from sbesson/omero-gateway_5.10.5 2026-10-03 00:27:44,097 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-03 00:27:44,201 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-10-03 00:27:44,201 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-10-03 00:27:44,201 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-10-03 00:27:44,201 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-10-03 00:27:44,201 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-10-03 00:27:44,201 [ scc.repo] DEBUG ## PRs found: 2026-10-03 00:27:44,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None 2026-10-03 00:27:45,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/508 HTTP/1.1" 200 None 2026-10-03 00:27:45,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/494 HTTP/1.1" 200 None 2026-10-03 00:27:46,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/494/comments HTTP/1.1" 200 None 2026-10-03 00:27:46,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/171259137/issues/494/comments?page=2 HTTP/1.1" 200 None 2026-10-03 00:27:46,870 [ scc.repo] DEBUG - PR 494 sbesson 'Upgrade build requirement and fix application packaging' 2026-10-03 00:27:47,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None 2026-10-03 00:27:47,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443/comments HTTP/1.1" 200 None 2026-10-03 00:27:47,887 [ scc.repo] DEBUG - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' 2026-10-03 00:27:47,887 [ scc.repo] DEBUG ## Branches found: 2026-10-03 00:27:47,888 [ scc.git] DEBUG Get sha1 of %s 2026-10-03 00:27:47,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:27:47,900 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-03 00:27:47,920 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-03 00:27:47,920 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-03 00:27:47,942 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-03 00:27:48,001 [ scc.git] DEBUG Already up to date. 2026-10-03 00:27:48,001 [ scc.git] DEBUG Calling 'git fetch origin pull/443/head' 2026-10-03 00:27:49,026 [ scc.git] DEBUG From https://github.com/ome/omero-insight 2026-10-03 00:27:49,026 [ scc.git] DEBUG * branch refs/pull/443/head -> FETCH_HEAD 2026-10-03 00:27:49,067 [ scc.git] DEBUG Calling 'git fetch origin pull/494/head' 2026-10-03 00:27:49,611 [ scc.git] DEBUG From https://github.com/ome/omero-insight 2026-10-03 00:27:49,611 [ scc.git] DEBUG * branch refs/pull/494/head -> FETCH_HEAD 2026-10-03 00:27:49,645 [ scc.git] DEBUG ## Unique users: [] 2026-10-03 00:27:49,645 [ scc.git] DEBUG Get sha1 of %s 2026-10-03 00:27:49,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:27:49,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...277768efcbcd219460921b2d91b944d1f2b18eed' 2026-10-03 00:27:49,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:27:49,725 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 443 (Perceptibly uniform luts for OMERO.insight) 277768efcbcd219460921b2d91b944d1f2b18eed' 2026-10-03 00:27:50,172 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-03 00:27:50,263 [ scc.git] DEBUG .../util/ui/colourpicker/LookupTableIconUtil.java | 20 +++++++++++--------- 2026-10-03 00:27:50,263 [ scc.git] DEBUG src/main/resources/images/util/lookuptables.png | Bin 19356 -> 23024 bytes 2026-10-03 00:27:50,263 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-10-03 00:27:50,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:27:50,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...77330d658c63aaaa9b2286d74e98486552a23816' 2026-10-03 00:27:50,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:27:50,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 494 (Upgrade build requirement and fix application packaging) 77330d658c63aaaa9b2286d74e98486552a23816' 2026-10-03 00:27:51,382 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-03 00:27:51,542 [ scc.git] DEBUG .github/workflows/gradle.yml | 119 +++------ 2026-10-03 00:27:51,542 [ scc.git] DEBUG Jenkinsfile | 4 +- 2026-10-03 00:27:51,542 [ scc.git] DEBUG README.md | 190 +++++--------- 2026-10-03 00:27:51,542 [ scc.git] DEBUG build.gradle | 116 +++++++-- 2026-10-03 00:27:51,542 [ scc.git] DEBUG buildSrc/build.gradle | 36 --- 2026-10-03 00:27:51,542 [ scc.git] DEBUG .../org/openmicroscopy/DistributePlugin.groovy | 180 ------------- 2026-10-03 00:27:51,542 [ scc.git] DEBUG .../org/openmicroscopy/InsightBasePlugin.groovy | 180 ------------- 2026-10-03 00:27:51,542 [ scc.git] DEBUG .../groovy/org/openmicroscopy/InsightPlugin.groovy | 97 ------- 2026-10-03 00:27:51,542 [ scc.git] DEBUG .../org/openmicroscopy/PackagerPlugin.groovy | 104 -------- 2026-10-03 00:27:51,542 [ scc.git] DEBUG .../groovy/org/openmicroscopy/PublishPlugin.groovy | 80 ------ 2026-10-03 00:27:51,542 [ scc.git] DEBUG .../main/groovy/org/openmicroscopy/Utils.groovy | 55 ---- 2026-10-03 00:27:51,542 [ scc.git] DEBUG gradle/wrapper/gradle-wrapper.jar | Bin 59203 -> 46175 bytes 2026-10-03 00:27:51,542 [ scc.git] DEBUG gradle/wrapper/gradle-wrapper.properties | 4 +- 2026-10-03 00:27:51,542 [ scc.git] DEBUG gradlew | 283 +++++++++++++-------- 2026-10-03 00:27:51,543 [ scc.git] DEBUG gradlew.bat | 182 ++++++------- 2026-10-03 00:27:51,543 [ scc.git] DEBUG init-ci.gradle | 1 + 2026-10-03 00:27:51,543 [ scc.git] DEBUG settings.gradle | 2 +- 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/about.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/container.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/containerImporter.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/dataBrowser.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/importer.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/imviewer.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/logback-spring.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/mdeConfiguration.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/measurement.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/metadataViewer.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG src/{ => dist}/config/treeviewer.xml | 0 2026-10-03 00:27:51,543 [ scc.git] DEBUG .../org/openmicroscopy/shoola/MainIJPlugin.java | 13 +- 2026-10-03 00:27:51,543 [ scc.git] DEBUG .../shoola/util/ui/BrowserLauncher.java | 26 +- 2026-10-03 00:27:51,543 [ scc.git] DEBUG .../main/resources/icons}/omeroImporter.icns | Bin 2026-10-03 00:27:51,543 [ scc.git] DEBUG .../main/resources/icons}/omeroImporter.ico | Bin 2026-10-03 00:27:51,543 [ scc.git] DEBUG .../main/resources/icons}/omeroInsight.icns | Bin 2026-10-03 00:27:51,543 [ scc.git] DEBUG .../main/resources/icons}/omeroInsight.ico | Bin 2026-10-03 00:27:51,543 [ scc.git] DEBUG 34 files changed, 475 insertions(+), 1197 deletions(-) 2026-10-03 00:27:51,543 [ scc.git] DEBUG delete mode 100644 buildSrc/build.gradle 2026-10-03 00:27:51,543 [ scc.git] DEBUG delete mode 100644 buildSrc/src/main/groovy/org/openmicroscopy/DistributePlugin.groovy 2026-10-03 00:27:51,543 [ scc.git] DEBUG delete mode 100644 buildSrc/src/main/groovy/org/openmicroscopy/InsightBasePlugin.groovy 2026-10-03 00:27:51,543 [ scc.git] DEBUG delete mode 100644 buildSrc/src/main/groovy/org/openmicroscopy/InsightPlugin.groovy 2026-10-03 00:27:51,543 [ scc.git] DEBUG delete mode 100644 buildSrc/src/main/groovy/org/openmicroscopy/PackagerPlugin.groovy 2026-10-03 00:27:51,543 [ scc.git] DEBUG delete mode 100644 buildSrc/src/main/groovy/org/openmicroscopy/PublishPlugin.groovy 2026-10-03 00:27:51,543 [ scc.git] DEBUG delete mode 100644 buildSrc/src/main/groovy/org/openmicroscopy/Utils.groovy 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/about.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/container.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/containerImporter.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/dataBrowser.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/importer.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/imviewer.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/logback-spring.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/mdeConfiguration.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/measurement.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/metadataViewer.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename src/{ => dist}/config/treeviewer.xml (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename {icons => src/main/resources/icons}/omeroImporter.icns (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename {icons => src/main/resources/icons}/omeroImporter.ico (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename {icons => src/main/resources/icons}/omeroInsight.icns (100%) 2026-10-03 00:27:51,543 [ scc.git] DEBUG rename {icons => src/main/resources/icons}/omeroInsight.ico (100%) 2026-10-03 00:27:51,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:27:51,749 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-03 00:27:51,864 [ scc.git] DEBUG Get sha1 of %s 2026-10-03 00:27:51,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:27:51,874 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-03 00:27:52,276 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faafc5c07d0> has no local changes 2026-10-03 00:27:52,276 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-insight Excluded PRs: - PR 508 sbesson 'Remove manually curated CHANGELOG in favor of GitHub releases' (stage: draft) Already up to date. Merged PRs: - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' - PR 494 sbesson 'Upgrade build requirement and fix application packaging' Generated by OMERO-insight-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/82/)' 2026-10-03 00:27:52,468 [ scc.git] DEBUG [detached HEAD 1e511e885] merge master -Dorg -Snone 2026-10-03 00:27:52,470 [ scc.merge] INFO Repository: ome/omero-insight 2026-10-03 00:27:52,470 [ scc.merge] INFO Excluded PRs: 2026-10-03 00:27:52,470 [ scc.merge] INFO - PR 508 sbesson 'Remove manually curated CHANGELOG in favor of GitHub releases' (stage: draft) 2026-10-03 00:27:52,470 [ scc.merge] INFO Already up to date. 2026-10-03 00:27:52,470 [ scc.merge] INFO 2026-10-03 00:27:52,470 [ scc.merge] INFO Merged PRs: 2026-10-03 00:27:52,471 [ scc.merge] INFO - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' 2026-10-03 00:27:52,471 [ scc.merge] INFO - PR 494 sbesson 'Upgrade build requirement and fix application packaging' 2026-10-03 00:27:52,471 [ scc.merge] INFO 2026-10-03 00:27:52,471 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-10-03 00:27:52,471 [ scc.git] DEBUG Calling 'git remote' Merge all submodules2026-10-03 00:27:53,831 [ scc.config] DEBUG Found github.token 2026-10-03 00:27:53,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-10-03 00:27:54,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:27:54,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:27:54,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-10-03 00:27:54,957 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 01:10 2026-10-03 00:27:54,957 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-03 00:27:54,967 [ scc.git] DEBUG Check current status 2026-10-03 00:27:54,968 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-03 00:27:54,989 [ scc.git] DEBUG 1e511e885 merge master -Dorg -Snone 2026-10-03 00:27:54,989 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-03 00:27:55,096 [ scc.config] DEBUG Found remote.origin.url 2026-10-03 00:27:55,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None 2026-10-03 00:27:56,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-03 00:27:56,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-03 00:27:56,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-03 00:27:57,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-03 00:27:57,423 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-03 00:27:57,537 [ scc.git] DEBUG Resetting... 2026-10-03 00:27:57,537 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-10-03 00:27:57,734 [ scc.git] DEBUG HEAD is now at 1e511e885 merge master -Dorg -Snone 2026-10-03 00:27:57,736 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-10-03 00:27:57,847 [ scc.git] DEBUG Check current status 2026-10-03 00:27:57,848 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-03 00:27:57,866 [ scc.git] DEBUG 1e511e885 merge master -Dorg -Snone 2026-10-03 00:27:57,867 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-03 00:27:57,975 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-10-03 00:27:57,975 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-10-03 00:27:57,975 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-10-03 00:27:57,975 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-10-03 00:27:57,975 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-10-03 00:27:57,975 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-10-03 00:27:57,975 [ scc.repo] DEBUG ## PRs found: 2026-10-03 00:27:58,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None 2026-10-03 00:27:58,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/508 HTTP/1.1" 200 None 2026-10-03 00:27:59,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/494 HTTP/1.1" 200 None 2026-10-03 00:27:59,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/494/comments HTTP/1.1" 200 None 2026-10-03 00:28:00,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/171259137/issues/494/comments?page=2 HTTP/1.1" 200 None 2026-10-03 00:28:00,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/77330d658c63aaaa9b2286d74e98486552a23816?page=1 HTTP/1.1" 200 None 2026-10-03 00:28:01,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/77330d658c63aaaa9b2286d74e98486552a23816/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-03 00:28:02,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/77330d658c63aaaa9b2286d74e98486552a23816/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-03 00:28:02,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/77330d658c63aaaa9b2286d74e98486552a23816?page=1 HTTP/1.1" 200 None 2026-10-03 00:28:03,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/77330d658c63aaaa9b2286d74e98486552a23816?per_page=1 HTTP/1.1" 200 None 2026-10-03 00:28:03,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/77330d658c63aaaa9b2286d74e98486552a23816?page=1 HTTP/1.1" 200 None 2026-10-03 00:28:04,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/77330d658c63aaaa9b2286d74e98486552a23816/status HTTP/1.1" 200 None 2026-10-03 00:28:04,350 [ scc.repo] DEBUG - PR 494 sbesson 'Upgrade build requirement and fix application packaging' 2026-10-03 00:28:04,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None 2026-10-03 00:28:05,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443/comments HTTP/1.1" 200 None 2026-10-03 00:28:05,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/277768efcbcd219460921b2d91b944d1f2b18eed?page=1 HTTP/1.1" 200 None 2026-10-03 00:28:06,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/277768efcbcd219460921b2d91b944d1f2b18eed/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-03 00:28:06,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/277768efcbcd219460921b2d91b944d1f2b18eed?page=1 HTTP/1.1" 200 None 2026-10-03 00:28:07,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/277768efcbcd219460921b2d91b944d1f2b18eed?per_page=1 HTTP/1.1" 200 2 2026-10-03 00:28:07,339 [ scc.repo] DEBUG - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' 2026-10-03 00:28:07,339 [ scc.repo] DEBUG ## Branches found: 2026-10-03 00:28:07,339 [ scc.git] DEBUG Get sha1 of %s 2026-10-03 00:28:07,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:28:07,359 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-03 00:28:07,391 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-03 00:28:07,391 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-03 00:28:07,420 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-03 00:28:07,501 [ scc.git] DEBUG Already up to date. 2026-10-03 00:28:07,501 [ scc.git] DEBUG Calling 'git fetch origin pull/443/head' 2026-10-03 00:28:07,987 [ scc.git] DEBUG From https://github.com/ome/omero-insight 2026-10-03 00:28:07,988 [ scc.git] DEBUG * branch refs/pull/443/head -> FETCH_HEAD 2026-10-03 00:28:08,029 [ scc.git] DEBUG Calling 'git fetch origin pull/494/head' 2026-10-03 00:28:08,527 [ scc.git] DEBUG From https://github.com/ome/omero-insight 2026-10-03 00:28:08,528 [ scc.git] DEBUG * branch refs/pull/494/head -> FETCH_HEAD 2026-10-03 00:28:08,565 [ scc.git] DEBUG ## Unique users: [] 2026-10-03 00:28:08,566 [ scc.git] DEBUG Get sha1 of %s 2026-10-03 00:28:08,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:28:08,577 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...277768efcbcd219460921b2d91b944d1f2b18eed' 2026-10-03 00:28:08,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:28:08,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 443 (Perceptibly uniform luts for OMERO.insight) 277768efcbcd219460921b2d91b944d1f2b18eed' 2026-10-03 00:28:08,698 [ scc.git] DEBUG Already up to date. 2026-10-03 00:28:08,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:28:08,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...77330d658c63aaaa9b2286d74e98486552a23816' 2026-10-03 00:28:08,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:28:08,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 494 (Upgrade build requirement and fix application packaging) 77330d658c63aaaa9b2286d74e98486552a23816' 2026-10-03 00:28:08,973 [ scc.git] DEBUG Already up to date. 2026-10-03 00:28:09,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-03 00:28:09,306 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-03 00:28:09,414 [ scc.git] DEBUG Get sha1 of %s 2026-10-03 00:28:09,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-03 00:28:09,424 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-03 00:28:09,525 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-03 00:28:09,706 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f065de5a590> has no local changes 2026-10-03 00:28:09,706 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-insight Excluded PRs: - PR 508 sbesson 'Remove manually curated CHANGELOG in favor of GitHub releases' (stage: draft) Already up to date. Merged PRs: - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' - PR 494 sbesson 'Upgrade build requirement and fix application packaging' Generated by OMERO-insight-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/82/)' 2026-10-03 00:28:09,892 [ scc.git] DEBUG [detached HEAD 61a6ad6c4] merge master -Dorg -Ssuccess-only 2026-10-03 00:28:09,894 [ scc.merge] INFO Repository: ome/omero-insight 2026-10-03 00:28:09,894 [ scc.merge] INFO Excluded PRs: 2026-10-03 00:28:09,894 [ scc.merge] INFO - PR 508 sbesson 'Remove manually curated CHANGELOG in favor of GitHub releases' (stage: draft) 2026-10-03 00:28:09,894 [ scc.merge] INFO Already up to date. 2026-10-03 00:28:09,894 [ scc.merge] INFO 2026-10-03 00:28:09,894 [ scc.merge] INFO Merged PRs: 2026-10-03 00:28:09,894 [ scc.merge] INFO - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' 2026-10-03 00:28:09,894 [ scc.merge] INFO - PR 494 sbesson 'Upgrade build requirement and fix application packaging' 2026-10-03 00:28:09,894 [ scc.merge] INFO 2026-10-03 00:28:09,894 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-10-03 00:28:09,894 [ scc.git] DEBUG Calling 'git remote' Update component versions Updating omero-gateway from 5.10.5 to 5.11.1-SNAPSHOT Commit all component version changes [detached HEAD fb1a849d9] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-03 00:28:19,033 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS