Console Output
+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-01-10 00:56:12,163 [ scc.config] DEBUG Found github.token
2026-01-10 00:56:12,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-01-10 00:56:12,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-01-10 00:56:12,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-01-10 00:56:13,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-01-10 00:56:13,255 [ scc.gh] DEBUG 3024 remaining from 5000 (Reset at 01:01
2026-01-10 00:56:13,256 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-01-10 00:56:13,258 [ scc.git] DEBUG Check current status
2026-01-10 00:56:13,258 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-01-10 00:56:13,260 [ scc.git] DEBUG 7d4ddff change date
2026-01-10 00:56:13,261 [ scc.git] DEBUG Calling 'git submodule status'
2026-01-10 00:56:13,299 [ scc.config] DEBUG Found remote.origin.url
2026-01-10 00:56:13,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-01-10 00:56:14,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-01-10 00:56:14,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-01-10 00:56:15,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-01-10 00:56:15,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-01-10 00:56:15,794 [ scc.git] DEBUG Resetting...
2026-01-10 00:56:15,794 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-01-10 00:56:15,798 [ scc.git] DEBUG HEAD is now at 7d4ddff change date
2026-01-10 00:56:15,799 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-01-10 00:56:15,836 [ scc.git] DEBUG Check current status
2026-01-10 00:56:15,836 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-01-10 00:56:15,838 [ scc.git] DEBUG 7d4ddff change date
2026-01-10 00:56:15,838 [ scc.git] DEBUG Calling 'git submodule status'
2026-01-10 00:56:15,874 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-01-10 00:56:15,874 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-01-10 00:56:15,874 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-01-10 00:56:15,874 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-01-10 00:56:15,874 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-01-10 00:56:15,874 [ scc.repo] DEBUG ## PRs found:
2026-01-10 00:56:16,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-01-10 00:56:16,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-01-10 00:56:16,833 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-01-10 00:56:16,833 [ scc.repo] DEBUG ## Branches found:
2026-01-10 00:56:16,833 [ scc.git] DEBUG Get sha1 of %s
2026-01-10 00:56:16,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:16,835 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-01-10 00:56:16,837 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-01-10 00:56:16,837 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-01-10 00:56:16,840 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-01-10 00:56:16,842 [ scc.git] DEBUG Already up to date.
2026-01-10 00:56:16,842 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-01-10 00:56:17,113 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-01-10 00:56:17,113 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-01-10 00:56:17,117 [ scc.git] DEBUG ## Unique users: []
2026-01-10 00:56:17,117 [ scc.git] DEBUG Get sha1 of %s
2026-01-10 00:56:17,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:17,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-01-10 00:56:17,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:17,123 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-01-10 00:56:17,131 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-01-10 00:56:17,133 [ scc.git] DEBUG .github/workflows/gradle.yml | 19 ++++++++++++-------
2026-01-10 00:56:17,134 [ scc.git] DEBUG build.gradle | 4 ++--
2026-01-10 00:56:17,134 [ scc.git] DEBUG 2 files changed, 14 insertions(+), 9 deletions(-)
2026-01-10 00:56:17,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-01-10 00:56:17,313 [ scc.git] DEBUG Calling 'git submodule update'
2026-01-10 00:56:17,350 [ scc.git] DEBUG Get sha1 of %s
2026-01-10 00:56:17,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:17,352 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-01-10 00:56:17,356 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa65d8d3910> has no local changes
2026-01-10 00:56:17,356 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/12/)'
2026-01-10 00:56:17,362 [ scc.git] DEBUG [detached HEAD b236467] merge master -Dorg -Snone
2026-01-10 00:56:17,362 [ scc.merge] INFO Repository: ome/omero-matlab
2026-01-10 00:56:17,362 [ scc.merge] INFO Already up to date.
2026-01-10 00:56:17,362 [ scc.merge] INFO
2026-01-10 00:56:17,362 [ scc.merge] INFO Merged PRs:
2026-01-10 00:56:17,362 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-01-10 00:56:17,362 [ scc.merge] INFO
2026-01-10 00:56:17,362 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-01-10 00:56:17,362 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2026-01-10 00:56:17,778 [ scc.config] DEBUG Found github.token
2026-01-10 00:56:17,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-01-10 00:56:17,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-01-10 00:56:18,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-01-10 00:56:18,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-01-10 00:56:18,745 [ scc.gh] DEBUG 3014 remaining from 5000 (Reset at 01:01
2026-01-10 00:56:18,745 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-01-10 00:56:18,748 [ scc.git] DEBUG Check current status
2026-01-10 00:56:18,748 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-01-10 00:56:18,750 [ scc.git] DEBUG b236467 merge master -Dorg -Snone
2026-01-10 00:56:18,750 [ scc.git] DEBUG Calling 'git submodule status'
2026-01-10 00:56:18,789 [ scc.config] DEBUG Found remote.origin.url
2026-01-10 00:56:19,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-01-10 00:56:19,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-01-10 00:56:20,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-01-10 00:56:20,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-01-10 00:56:20,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-01-10 00:56:20,985 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-01-10 00:56:21,022 [ scc.git] DEBUG Resetting...
2026-01-10 00:56:21,022 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-01-10 00:56:21,025 [ scc.git] DEBUG HEAD is now at b236467 merge master -Dorg -Snone
2026-01-10 00:56:21,026 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-01-10 00:56:21,062 [ scc.git] DEBUG Check current status
2026-01-10 00:56:21,062 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-01-10 00:56:21,064 [ scc.git] DEBUG b236467 merge master -Dorg -Snone
2026-01-10 00:56:21,064 [ scc.git] DEBUG Calling 'git submodule status'
2026-01-10 00:56:21,099 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-01-10 00:56:21,099 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-01-10 00:56:21,099 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-01-10 00:56:21,099 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-01-10 00:56:21,099 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-01-10 00:56:21,099 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-01-10 00:56:21,099 [ scc.repo] DEBUG ## PRs found:
2026-01-10 00:56:21,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-01-10 00:56:21,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-01-10 00:56:22,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-01-10 00:56:22,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-01-10 00:56:23,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-01-10 00:56:23,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-01-10 00:56:24,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2026-01-10 00:56:24,402 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-01-10 00:56:24,402 [ scc.repo] DEBUG ## Branches found:
2026-01-10 00:56:24,402 [ scc.git] DEBUG Get sha1 of %s
2026-01-10 00:56:24,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:24,404 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-01-10 00:56:24,406 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-01-10 00:56:24,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-01-10 00:56:24,409 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-01-10 00:56:24,412 [ scc.git] DEBUG Already up to date.
2026-01-10 00:56:24,412 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-01-10 00:56:24,684 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-01-10 00:56:24,684 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-01-10 00:56:24,689 [ scc.git] DEBUG ## Unique users: []
2026-01-10 00:56:24,689 [ scc.git] DEBUG Get sha1 of %s
2026-01-10 00:56:24,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:24,691 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-01-10 00:56:24,693 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:24,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-01-10 00:56:24,697 [ scc.git] DEBUG Already up to date.
2026-01-10 00:56:24,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-01-10 00:56:24,860 [ scc.git] DEBUG Calling 'git submodule update'
2026-01-10 00:56:24,896 [ scc.git] DEBUG Get sha1 of %s
2026-01-10 00:56:24,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-01-10 00:56:24,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-01-10 00:56:24,934 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-01-10 00:56:24,937 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7feac34671d0> has no local changes
2026-01-10 00:56:24,938 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#12 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/12/)'
2026-01-10 00:56:25,172 [ scc.git] DEBUG [detached HEAD 392954e] merge master -Dorg -Ssuccess-only
2026-01-10 00:56:25,172 [ scc.merge] INFO Repository: ome/omero-matlab
2026-01-10 00:56:25,172 [ scc.merge] INFO Already up to date.
2026-01-10 00:56:25,172 [ scc.merge] INFO
2026-01-10 00:56:25,172 [ scc.merge] INFO Merged PRs:
2026-01-10 00:56:25,172 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-01-10 00:56:25,172 [ scc.merge] INFO
2026-01-10 00:56:25,172 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-01-10 00:56:25,172 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.5-SNAPSHOT
Commit all component version changes
[detached HEAD f012e32] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2026-01-10 00:56:31,044 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci
