Console Output
+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-12-20 00:57:15,350 [ scc.config] DEBUG Found github.token
2025-12-20 00:57:15,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-12-20 00:57:15,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-20 00:57:15,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-20 00:57:16,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-12-20 00:57:16,323 [ scc.gh] DEBUG 4274 remaining from 5000 (Reset at 01:12
2025-12-20 00:57:16,323 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-20 00:57:16,326 [ scc.git] DEBUG Check current status
2025-12-20 00:57:16,326 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-20 00:57:16,328 [ scc.git] DEBUG 7d4ddff change date
2025-12-20 00:57:16,329 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-20 00:57:16,367 [ scc.config] DEBUG Found remote.origin.url
2025-12-20 00:57:16,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-12-20 00:57:17,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-20 00:57:17,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-20 00:57:18,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-20 00:57:18,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-20 00:57:18,589 [ scc.git] DEBUG Resetting...
2025-12-20 00:57:18,589 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-12-20 00:57:18,593 [ scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-12-20 00:57:18,593 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-12-20 00:57:18,630 [ scc.git] DEBUG Check current status
2025-12-20 00:57:18,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-20 00:57:18,632 [ scc.git] DEBUG 7d4ddff change date
2025-12-20 00:57:18,632 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-20 00:57:18,667 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-12-20 00:57:18,667 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-12-20 00:57:18,667 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-12-20 00:57:18,667 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-12-20 00:57:18,667 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-12-20 00:57:18,667 [ scc.repo] DEBUG ## PRs found:
2025-12-20 00:57:19,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-12-20 00:57:19,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-12-20 00:57:19,599 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2025-12-20 00:57:19,599 [ scc.repo] DEBUG ## Branches found:
2025-12-20 00:57:19,599 [ scc.git] DEBUG Get sha1 of %s
2025-12-20 00:57:19,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:19,602 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-20 00:57:19,604 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-20 00:57:19,604 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-20 00:57:19,606 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-20 00:57:19,609 [ scc.git] DEBUG Already up to date.
2025-12-20 00:57:19,609 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-12-20 00:57:19,875 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-12-20 00:57:19,875 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2025-12-20 00:57:19,879 [ scc.git] DEBUG ## Unique users: []
2025-12-20 00:57:19,880 [ scc.git] DEBUG Get sha1 of %s
2025-12-20 00:57:19,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:19,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-12-20 00:57:19,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:19,886 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-12-20 00:57:19,893 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-20 00:57:19,896 [ scc.git] DEBUG .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-12-20 00:57:19,896 [ scc.git] DEBUG build.gradle | 4 ++--
2025-12-20 00:57:19,896 [ scc.git] DEBUG 2 files changed, 14 insertions(+), 9 deletions(-)
2025-12-20 00:57:20,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-20 00:57:20,024 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-20 00:57:20,060 [ scc.git] DEBUG Get sha1 of %s
2025-12-20 00:57:20,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:20,062 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-20 00:57:20,066 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7eabba3650> has no local changes
2025-12-20 00:57:20,066 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#3 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/3/)'
2025-12-20 00:57:20,072 [ scc.git] DEBUG [detached HEAD db6ff85] merge master -Dorg -Snone
2025-12-20 00:57:20,072 [ scc.merge] INFO Repository: ome/omero-matlab
2025-12-20 00:57:20,072 [ scc.merge] INFO Already up to date.
2025-12-20 00:57:20,072 [ scc.merge] INFO
2025-12-20 00:57:20,072 [ scc.merge] INFO Merged PRs:
2025-12-20 00:57:20,072 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2025-12-20 00:57:20,072 [ scc.merge] INFO
2025-12-20 00:57:20,072 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-12-20 00:57:20,072 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-12-20 00:57:20,490 [ scc.config] DEBUG Found github.token
2025-12-20 00:57:20,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-12-20 00:57:20,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-20 00:57:21,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-20 00:57:21,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-12-20 00:57:21,477 [ scc.gh] DEBUG 4256 remaining from 5000 (Reset at 01:12
2025-12-20 00:57:21,477 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-20 00:57:21,480 [ scc.git] DEBUG Check current status
2025-12-20 00:57:21,480 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-20 00:57:21,483 [ scc.git] DEBUG db6ff85 merge master -Dorg -Snone
2025-12-20 00:57:21,483 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-20 00:57:21,523 [ scc.config] DEBUG Found remote.origin.url
2025-12-20 00:57:21,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-12-20 00:57:22,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-20 00:57:22,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-20 00:57:23,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-20 00:57:23,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-20 00:57:23,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-20 00:57:23,734 [ scc.git] DEBUG Resetting...
2025-12-20 00:57:23,735 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-12-20 00:57:23,738 [ scc.git] DEBUG HEAD is now at db6ff85 merge master -Dorg -Snone
2025-12-20 00:57:23,738 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-12-20 00:57:23,777 [ scc.git] DEBUG Check current status
2025-12-20 00:57:23,777 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-20 00:57:23,779 [ scc.git] DEBUG db6ff85 merge master -Dorg -Snone
2025-12-20 00:57:23,780 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-20 00:57:23,817 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-12-20 00:57:23,817 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-12-20 00:57:23,817 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-12-20 00:57:23,817 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-12-20 00:57:23,817 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-12-20 00:57:23,817 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-12-20 00:57:23,817 [ scc.repo] DEBUG ## PRs found:
2025-12-20 00:57:24,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-12-20 00:57:24,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-12-20 00:57:25,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-12-20 00:57:25,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-20 00:57:26,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-20 00:57:26,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-12-20 00:57:27,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-12-20 00:57:27,317 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2025-12-20 00:57:27,317 [ scc.repo] DEBUG ## Branches found:
2025-12-20 00:57:27,318 [ scc.git] DEBUG Get sha1 of %s
2025-12-20 00:57:27,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:27,320 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-20 00:57:27,322 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-20 00:57:27,322 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-20 00:57:27,325 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-20 00:57:27,329 [ scc.git] DEBUG Already up to date.
2025-12-20 00:57:27,329 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-12-20 00:57:27,596 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-12-20 00:57:27,596 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2025-12-20 00:57:27,600 [ scc.git] DEBUG ## Unique users: []
2025-12-20 00:57:27,600 [ scc.git] DEBUG Get sha1 of %s
2025-12-20 00:57:27,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:27,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-12-20 00:57:27,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:27,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-12-20 00:57:27,609 [ scc.git] DEBUG Already up to date.
2025-12-20 00:57:27,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-20 00:57:27,741 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-20 00:57:27,780 [ scc.git] DEBUG Get sha1 of %s
2025-12-20 00:57:27,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-20 00:57:27,782 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-20 00:57:27,819 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-20 00:57:27,822 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fee38873d50> has no local changes
2025-12-20 00:57:27,822 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#3 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/3/)'
2025-12-20 00:57:27,829 [ scc.git] DEBUG [detached HEAD 439fa8f] merge master -Dorg -Ssuccess-only
2025-12-20 00:57:27,829 [ scc.merge] INFO Repository: ome/omero-matlab
2025-12-20 00:57:27,829 [ scc.merge] INFO Already up to date.
2025-12-20 00:57:27,829 [ scc.merge] INFO
2025-12-20 00:57:27,829 [ scc.merge] INFO Merged PRs:
2025-12-20 00:57:27,829 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2025-12-20 00:57:27,829 [ scc.merge] INFO
2025-12-20 00:57:27,829 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-12-20 00:57:27,829 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.5-SNAPSHOT
Commit all component version changes
[detached HEAD 8f19bfd] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-20 00:57:33,791 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci
