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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-05-15 00:58:47,922 [  scc.config] DEBUG Found github.token
2025-05-15 00:58:47,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:48,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-05-15 00:58:48,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:48,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-05-15 00:58:48,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:48,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-05-15 00:58:48,927 [      scc.gh] DEBUG 2453 remaining from 5000 (Reset at 01:05
2025-05-15 00:58:48,928 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-05-15 00:58:48,931 [     scc.git] DEBUG Check current status
2025-05-15 00:58:48,931 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-05-15 00:58:48,934 [     scc.git] DEBUG 7d4ddff change date
2025-05-15 00:58:48,934 [     scc.git] DEBUG Calling 'git submodule status'
2025-05-15 00:58:48,974 [  scc.config] DEBUG Found remote.origin.url
2025-05-15 00:58:49,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:49,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-05-15 00:58:49,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:49,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-05-15 00:58:50,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:50,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-05-15 00:58:50,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:50,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-05-15 00:58:51,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:51,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-05-15 00:58:51,265 [     scc.git] DEBUG Resetting...
2025-05-15 00:58:51,265 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-05-15 00:58:51,270 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-05-15 00:58:51,270 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-05-15 00:58:51,312 [     scc.git] DEBUG Check current status
2025-05-15 00:58:51,312 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-05-15 00:58:51,315 [     scc.git] DEBUG 7d4ddff change date
2025-05-15 00:58:51,315 [     scc.git] DEBUG Calling 'git submodule status'
2025-05-15 00:58:51,362 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-05-15 00:58:51,362 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-05-15 00:58:51,362 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-05-15 00:58:51,362 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-05-15 00:58:51,362 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-05-15 00:58:51,362 [    scc.repo] DEBUG ## PRs found:
2025-05-15 00:58:51,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:51,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-05-15 00:58:52,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:52,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-05-15 00:58:52,260 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-05-15 00:58:52,260 [    scc.repo] DEBUG ## Branches found:
2025-05-15 00:58:52,260 [     scc.git] DEBUG Get sha1 of %s
2025-05-15 00:58:52,260 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:58:52,263 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-05-15 00:58:52,265 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-05-15 00:58:52,265 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-05-15 00:58:52,268 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-05-15 00:58:52,271 [     scc.git] DEBUG Already up to date.

2025-05-15 00:58:52,271 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-05-15 00:58:52,553 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-05-15 00:58:52,553 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-05-15 00:58:52,558 [     scc.git] DEBUG ## Unique users: []
2025-05-15 00:58:52,558 [     scc.git] DEBUG Get sha1 of %s
2025-05-15 00:58:52,558 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:58:52,560 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-05-15 00:58:52,563 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:58:52,566 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-05-15 00:58:52,575 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-05-15 00:58:52,578 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-05-15 00:58:52,578 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-05-15 00:58:52,578 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-05-15 00:58:52,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:52,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-05-15 00:58:52,738 [     scc.git] DEBUG Calling 'git submodule update'
2025-05-15 00:58:52,782 [     scc.git] DEBUG Get sha1 of %s
2025-05-15 00:58:52,782 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:58:52,784 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-05-15 00:58:52,905 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f9ac680c350> has no local changes
2025-05-15 00:58:52,905 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#380 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/380/)'
2025-05-15 00:58:52,913 [     scc.git] DEBUG [detached HEAD 1672f82] merge master -Dorg -Snone
2025-05-15 00:58:52,914 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-05-15 00:58:52,914 [   scc.merge] INFO  Already up to date.
2025-05-15 00:58:52,914 [   scc.merge] INFO  
2025-05-15 00:58:52,914 [   scc.merge] INFO  Merged PRs:
2025-05-15 00:58:52,914 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-05-15 00:58:52,914 [   scc.merge] INFO  
2025-05-15 00:58:52,914 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-05-15 00:58:52,914 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-05-15 00:58:53,400 [  scc.config] DEBUG Found github.token
2025-05-15 00:58:53,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:53,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-05-15 00:58:53,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:54,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-05-15 00:58:54,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:54,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-05-15 00:58:54,406 [      scc.gh] DEBUG 2443 remaining from 5000 (Reset at 01:05
2025-05-15 00:58:54,406 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-05-15 00:58:54,409 [     scc.git] DEBUG Check current status
2025-05-15 00:58:54,409 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-05-15 00:58:54,412 [     scc.git] DEBUG 1672f82 merge master -Dorg -Snone
2025-05-15 00:58:54,412 [     scc.git] DEBUG Calling 'git submodule status'
2025-05-15 00:58:54,453 [  scc.config] DEBUG Found remote.origin.url
2025-05-15 00:58:54,657 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:54,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-05-15 00:58:55,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:55,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-05-15 00:58:55,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:55,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-05-15 00:58:56,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:56,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-05-15 00:58:56,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:56,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-05-15 00:58:56,732 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-05-15 00:58:56,772 [     scc.git] DEBUG Resetting...
2025-05-15 00:58:56,772 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-05-15 00:58:56,776 [     scc.git] DEBUG HEAD is now at 1672f82 merge master -Dorg -Snone
2025-05-15 00:58:56,777 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-05-15 00:58:56,817 [     scc.git] DEBUG Check current status
2025-05-15 00:58:56,818 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-05-15 00:58:56,820 [     scc.git] DEBUG 1672f82 merge master -Dorg -Snone
2025-05-15 00:58:56,820 [     scc.git] DEBUG Calling 'git submodule status'
2025-05-15 00:58:56,862 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-05-15 00:58:56,862 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-05-15 00:58:56,862 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-05-15 00:58:56,862 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-05-15 00:58:56,862 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-05-15 00:58:56,862 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-05-15 00:58:56,862 [    scc.repo] DEBUG ## PRs found:
2025-05-15 00:58:56,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:57,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-05-15 00:58:57,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:57,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-05-15 00:58:57,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:58,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-05-15 00:58:58,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:58,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-05-15 00:58:59,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:59,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-05-15 00:58:59,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:58:59,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-05-15 00:59:00,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:59:00,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-05-15 00:59:00,310 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-05-15 00:59:00,310 [    scc.repo] DEBUG ## Branches found:
2025-05-15 00:59:00,310 [     scc.git] DEBUG Get sha1 of %s
2025-05-15 00:59:00,311 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:59:00,313 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-05-15 00:59:00,316 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-05-15 00:59:00,316 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-05-15 00:59:00,319 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-05-15 00:59:00,322 [     scc.git] DEBUG Already up to date.

2025-05-15 00:59:00,322 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-05-15 00:59:00,594 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-05-15 00:59:00,594 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-05-15 00:59:00,599 [     scc.git] DEBUG ## Unique users: []
2025-05-15 00:59:00,600 [     scc.git] DEBUG Get sha1 of %s
2025-05-15 00:59:00,600 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:59:00,602 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-05-15 00:59:00,605 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:59:00,607 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-05-15 00:59:00,610 [     scc.git] DEBUG Already up to date.
2025-05-15 00:59:00,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-05-15 00:59:00,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-05-15 00:59:00,783 [     scc.git] DEBUG Calling 'git submodule update'
2025-05-15 00:59:00,842 [     scc.git] DEBUG Get sha1 of %s
2025-05-15 00:59:00,842 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-05-15 00:59:00,845 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-05-15 00:59:00,885 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-05-15 00:59:00,888 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7b43b92d90> has no local changes
2025-05-15 00:59:00,888 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#380 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/380/)'
2025-05-15 00:59:00,895 [     scc.git] DEBUG [detached HEAD 060725b] merge master -Dorg -Ssuccess-only
2025-05-15 00:59:00,896 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-05-15 00:59:00,896 [   scc.merge] INFO  Already up to date.
2025-05-15 00:59:00,896 [   scc.merge] INFO  
2025-05-15 00:59:00,896 [   scc.merge] INFO  Merged PRs:
2025-05-15 00:59:00,896 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-05-15 00:59:00,896 [   scc.merge] INFO  
2025-05-15 00:59:00,896 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-05-15 00:59:00,896 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.3-SNAPSHOT
Commit all component version changes
[detached HEAD fc2ec8d] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-05-15 00:59:07,032 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci