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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-10 01:01:59,936 [  scc.config] DEBUG Found github.token
2025-08-10 01:01:59,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:00,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-10 01:02:00,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:00,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-10 01:02:00,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:01,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-10 01:02:01,006 [      scc.gh] DEBUG 3804 remaining from 5000 (Reset at 01:08
2025-08-10 01:02:01,007 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-10 01:02:01,010 [     scc.git] DEBUG Check current status
2025-08-10 01:02:01,010 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-10 01:02:01,012 [     scc.git] DEBUG 7d4ddff change date
2025-08-10 01:02:01,012 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-10 01:02:01,055 [  scc.config] DEBUG Found remote.origin.url
2025-08-10 01:02:01,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:01,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-10 01:02:01,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:02,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-10 01:02:02,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:02,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-10 01:02:02,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:03,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-10 01:02:03,277 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:03,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-10 01:02:03,465 [     scc.git] DEBUG Resetting...
2025-08-10 01:02:03,465 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-10 01:02:03,469 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-08-10 01:02:03,470 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-10 01:02:03,511 [     scc.git] DEBUG Check current status
2025-08-10 01:02:03,511 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-10 01:02:03,514 [     scc.git] DEBUG 7d4ddff change date
2025-08-10 01:02:03,514 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-10 01:02:03,553 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-10 01:02:03,553 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-10 01:02:03,554 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-10 01:02:03,554 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-10 01:02:03,554 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-10 01:02:03,554 [    scc.repo] DEBUG ## PRs found:
2025-08-10 01:02:03,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:03,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-10 01:02:04,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:04,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-10 01:02:04,497 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-10 01:02:04,497 [    scc.repo] DEBUG ## Branches found:
2025-08-10 01:02:04,497 [     scc.git] DEBUG Get sha1 of %s
2025-08-10 01:02:04,497 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:04,499 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-10 01:02:04,502 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-10 01:02:04,502 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-10 01:02:04,504 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-10 01:02:04,507 [     scc.git] DEBUG Already up to date.

2025-08-10 01:02:04,508 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-10 01:02:04,795 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-10 01:02:04,795 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-10 01:02:04,799 [     scc.git] DEBUG ## Unique users: []
2025-08-10 01:02:04,799 [     scc.git] DEBUG Get sha1 of %s
2025-08-10 01:02:04,799 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:04,801 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-10 01:02:04,804 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:04,806 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-10 01:02:04,814 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-10 01:02:04,817 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-08-10 01:02:04,817 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-08-10 01:02:04,817 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-08-10 01:02:04,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:05,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-10 01:02:05,010 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-10 01:02:05,051 [     scc.git] DEBUG Get sha1 of %s
2025-08-10 01:02:05,052 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:05,054 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-10 01:02:05,057 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fdad62c3dd0> has no local changes
2025-08-10 01:02:05,058 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#447 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/447/)'
2025-08-10 01:02:05,064 [     scc.git] DEBUG [detached HEAD 9105569] merge master -Dorg -Snone
2025-08-10 01:02:05,064 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-10 01:02:05,064 [   scc.merge] INFO  Already up to date.
2025-08-10 01:02:05,064 [   scc.merge] INFO  
2025-08-10 01:02:05,064 [   scc.merge] INFO  Merged PRs:
2025-08-10 01:02:05,064 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-10 01:02:05,064 [   scc.merge] INFO  
2025-08-10 01:02:05,064 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-10 01:02:05,064 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-08-10 01:02:05,516 [  scc.config] DEBUG Found github.token
2025-08-10 01:02:05,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:05,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-10 01:02:05,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:06,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-10 01:02:06,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:06,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-10 01:02:06,547 [      scc.gh] DEBUG 3794 remaining from 5000 (Reset at 01:08
2025-08-10 01:02:06,547 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-10 01:02:06,550 [     scc.git] DEBUG Check current status
2025-08-10 01:02:06,550 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-10 01:02:06,552 [     scc.git] DEBUG 9105569 merge master -Dorg -Snone
2025-08-10 01:02:06,552 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-10 01:02:06,595 [  scc.config] DEBUG Found remote.origin.url
2025-08-10 01:02:06,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:07,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-10 01:02:07,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:07,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-10 01:02:07,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:08,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-10 01:02:08,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:08,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-10 01:02:08,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:08,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-10 01:02:08,970 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-10 01:02:09,012 [     scc.git] DEBUG Resetting...
2025-08-10 01:02:09,012 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-10 01:02:09,016 [     scc.git] DEBUG HEAD is now at 9105569 merge master -Dorg -Snone
2025-08-10 01:02:09,017 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-10 01:02:09,055 [     scc.git] DEBUG Check current status
2025-08-10 01:02:09,055 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-10 01:02:09,057 [     scc.git] DEBUG 9105569 merge master -Dorg -Snone
2025-08-10 01:02:09,058 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-10 01:02:09,097 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-10 01:02:09,097 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-10 01:02:09,097 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-10 01:02:09,097 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-10 01:02:09,097 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-10 01:02:09,097 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-08-10 01:02:09,097 [    scc.repo] DEBUG ## PRs found:
2025-08-10 01:02:09,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:09,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-10 01:02:09,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:10,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-10 01:02:10,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:10,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-10 01:02:10,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:11,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-10 01:02:11,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:11,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-10 01:02:11,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:12,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-10 01:02:12,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:12,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-08-10 01:02:12,633 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-10 01:02:12,633 [    scc.repo] DEBUG ## Branches found:
2025-08-10 01:02:12,633 [     scc.git] DEBUG Get sha1 of %s
2025-08-10 01:02:12,633 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:12,636 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-10 01:02:12,638 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-10 01:02:12,638 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-10 01:02:12,641 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-10 01:02:12,644 [     scc.git] DEBUG Already up to date.

2025-08-10 01:02:12,645 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-10 01:02:13,552 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-10 01:02:13,552 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-10 01:02:13,556 [     scc.git] DEBUG ## Unique users: []
2025-08-10 01:02:13,557 [     scc.git] DEBUG Get sha1 of %s
2025-08-10 01:02:13,557 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:13,559 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-10 01:02:13,562 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:13,564 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-10 01:02:13,567 [     scc.git] DEBUG Already up to date.
2025-08-10 01:02:13,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-10 01:02:13,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-10 01:02:13,757 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-10 01:02:13,798 [     scc.git] DEBUG Get sha1 of %s
2025-08-10 01:02:13,798 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-10 01:02:13,801 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-10 01:02:13,840 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-10 01:02:13,844 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f83fd193690> has no local changes
2025-08-10 01:02:13,844 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#447 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/447/)'
2025-08-10 01:02:13,850 [     scc.git] DEBUG [detached HEAD a910125] merge master -Dorg -Ssuccess-only
2025-08-10 01:02:13,850 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-10 01:02:13,851 [   scc.merge] INFO  Already up to date.
2025-08-10 01:02:13,851 [   scc.merge] INFO  
2025-08-10 01:02:13,851 [   scc.merge] INFO  Merged PRs:
2025-08-10 01:02:13,851 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-10 01:02:13,851 [   scc.merge] INFO  
2025-08-10 01:02:13,851 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-10 01:02:13,851 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD 6053c1a] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-10 01:02:20,075 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci