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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-12 01:02:06,647 [  scc.config] DEBUG Found github.token
2025-08-12 01:02:06,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:06,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-12 01:02:07,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:07,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-12 01:02:07,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:07,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-12 01:02:07,709 [      scc.gh] DEBUG 4893 remaining from 5000 (Reset at 02:08
2025-08-12 01:02:07,709 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-12 01:02:07,712 [     scc.git] DEBUG Check current status
2025-08-12 01:02:07,712 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-12 01:02:07,714 [     scc.git] DEBUG 7d4ddff change date
2025-08-12 01:02:07,714 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-12 01:02:07,756 [  scc.config] DEBUG Found remote.origin.url
2025-08-12 01:02:07,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:08,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-12 01:02:08,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:08,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-12 01:02:09,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:09,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-12 01:02:09,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:09,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-12 01:02:09,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:10,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-12 01:02:10,200 [     scc.git] DEBUG Resetting...
2025-08-12 01:02:10,201 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-12 01:02:10,205 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-08-12 01:02:10,205 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-12 01:02:10,246 [     scc.git] DEBUG Check current status
2025-08-12 01:02:10,246 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-12 01:02:10,249 [     scc.git] DEBUG 7d4ddff change date
2025-08-12 01:02:10,249 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-12 01:02:10,287 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-12 01:02:10,287 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-12 01:02:10,287 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-12 01:02:10,287 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-12 01:02:10,287 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-12 01:02:10,287 [    scc.repo] DEBUG ## PRs found:
2025-08-12 01:02:10,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:10,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-12 01:02:11,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:11,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-12 01:02:11,273 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-12 01:02:11,273 [    scc.repo] DEBUG ## Branches found:
2025-08-12 01:02:11,273 [     scc.git] DEBUG Get sha1 of %s
2025-08-12 01:02:11,273 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:11,276 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-12 01:02:11,278 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-12 01:02:11,278 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-12 01:02:11,281 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-12 01:02:11,284 [     scc.git] DEBUG Already up to date.

2025-08-12 01:02:11,284 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-12 01:02:11,575 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-12 01:02:11,576 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-12 01:02:11,580 [     scc.git] DEBUG ## Unique users: []
2025-08-12 01:02:11,580 [     scc.git] DEBUG Get sha1 of %s
2025-08-12 01:02:11,580 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:11,582 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-12 01:02:11,585 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:11,587 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-12 01:02:11,595 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-12 01:02:11,598 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-08-12 01:02:11,598 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-08-12 01:02:11,598 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-08-12 01:02:11,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:11,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-12 01:02:11,812 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-12 01:02:11,853 [     scc.git] DEBUG Get sha1 of %s
2025-08-12 01:02:11,853 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:11,855 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-12 01:02:11,859 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe24b708490> has no local changes
2025-08-12 01:02:11,859 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#449 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/449/)'
2025-08-12 01:02:11,866 [     scc.git] DEBUG [detached HEAD 1bf5f8d] merge master -Dorg -Snone
2025-08-12 01:02:11,866 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-12 01:02:11,866 [   scc.merge] INFO  Already up to date.
2025-08-12 01:02:11,866 [   scc.merge] INFO  
2025-08-12 01:02:11,866 [   scc.merge] INFO  Merged PRs:
2025-08-12 01:02:11,866 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-12 01:02:11,866 [   scc.merge] INFO  
2025-08-12 01:02:11,866 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-12 01:02:11,866 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-08-12 01:02:12,318 [  scc.config] DEBUG Found github.token
2025-08-12 01:02:12,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:12,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-12 01:02:12,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:12,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-12 01:02:13,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:13,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-12 01:02:13,420 [      scc.gh] DEBUG 4883 remaining from 5000 (Reset at 02:08
2025-08-12 01:02:13,420 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-12 01:02:13,423 [     scc.git] DEBUG Check current status
2025-08-12 01:02:13,423 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-12 01:02:13,425 [     scc.git] DEBUG 1bf5f8d merge master -Dorg -Snone
2025-08-12 01:02:13,426 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-12 01:02:13,468 [  scc.config] DEBUG Found remote.origin.url
2025-08-12 01:02:13,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:13,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-12 01:02:14,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:14,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-12 01:02:14,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:14,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-12 01:02:15,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:15,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-12 01:02:15,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:15,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-12 01:02:15,810 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-12 01:02:15,849 [     scc.git] DEBUG Resetting...
2025-08-12 01:02:15,850 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-12 01:02:15,854 [     scc.git] DEBUG HEAD is now at 1bf5f8d merge master -Dorg -Snone
2025-08-12 01:02:15,854 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-12 01:02:15,893 [     scc.git] DEBUG Check current status
2025-08-12 01:02:15,893 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-12 01:02:15,895 [     scc.git] DEBUG 1bf5f8d merge master -Dorg -Snone
2025-08-12 01:02:15,896 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-12 01:02:15,933 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-12 01:02:15,933 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-12 01:02:15,933 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-12 01:02:15,933 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-12 01:02:15,933 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-12 01:02:15,933 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-08-12 01:02:15,934 [    scc.repo] DEBUG ## PRs found:
2025-08-12 01:02:16,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:16,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-12 01:02:16,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:16,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-12 01:02:17,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:17,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-12 01:02:17,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:17,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-12 01:02:18,225 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:18,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-12 01:02:18,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:18,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-12 01:02:19,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:19,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-08-12 01:02:19,418 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-12 01:02:19,418 [    scc.repo] DEBUG ## Branches found:
2025-08-12 01:02:19,418 [     scc.git] DEBUG Get sha1 of %s
2025-08-12 01:02:19,418 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:19,421 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-12 01:02:19,424 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-12 01:02:19,424 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-12 01:02:19,427 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-12 01:02:19,431 [     scc.git] DEBUG Already up to date.

2025-08-12 01:02:19,431 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-12 01:02:20,663 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-12 01:02:20,663 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-12 01:02:20,667 [     scc.git] DEBUG ## Unique users: []
2025-08-12 01:02:20,668 [     scc.git] DEBUG Get sha1 of %s
2025-08-12 01:02:20,668 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:20,670 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-12 01:02:20,673 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:20,675 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-12 01:02:20,678 [     scc.git] DEBUG Already up to date.
2025-08-12 01:02:20,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-12 01:02:20,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-12 01:02:20,861 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-12 01:02:20,901 [     scc.git] DEBUG Get sha1 of %s
2025-08-12 01:02:20,901 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-12 01:02:20,903 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-12 01:02:20,942 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-12 01:02:20,946 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7ffb5e2942d0> has no local changes
2025-08-12 01:02:20,946 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#449 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/449/)'
2025-08-12 01:02:20,952 [     scc.git] DEBUG [detached HEAD 1118942] merge master -Dorg -Ssuccess-only
2025-08-12 01:02:20,953 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-12 01:02:20,953 [   scc.merge] INFO  Already up to date.
2025-08-12 01:02:20,953 [   scc.merge] INFO  
2025-08-12 01:02:20,953 [   scc.merge] INFO  Merged PRs:
2025-08-12 01:02:20,953 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-12 01:02:20,953 [   scc.merge] INFO  
2025-08-12 01:02:20,953 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-12 01:02:20,953 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD 39dc725] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-12 01:02:27,303 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci