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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-16 00:57:19,124 [  scc.config] DEBUG Found github.token
2025-08-16 00:57:19,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:19,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-16 00:57:19,578 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:19,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-16 00:57:20,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:20,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-16 00:57:20,193 [      scc.gh] DEBUG 4452 remaining from 5000 (Reset at 01:08
2025-08-16 00:57:20,194 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-16 00:57:20,197 [     scc.git] DEBUG Check current status
2025-08-16 00:57:20,197 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-16 00:57:20,199 [     scc.git] DEBUG 7d4ddff change date
2025-08-16 00:57:20,200 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-16 00:57:20,241 [  scc.config] DEBUG Found remote.origin.url
2025-08-16 00:57:20,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:20,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-16 00:57:21,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:21,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-16 00:57:21,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:21,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-16 00:57:21,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:22,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-16 00:57:22,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:22,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-16 00:57:22,734 [     scc.git] DEBUG Resetting...
2025-08-16 00:57:22,734 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-16 00:57:22,739 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-08-16 00:57:22,739 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-16 00:57:22,779 [     scc.git] DEBUG Check current status
2025-08-16 00:57:22,779 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-16 00:57:22,781 [     scc.git] DEBUG 7d4ddff change date
2025-08-16 00:57:22,782 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-16 00:57:22,822 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-16 00:57:22,822 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-16 00:57:22,822 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-16 00:57:22,822 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-16 00:57:22,822 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-16 00:57:22,822 [    scc.repo] DEBUG ## PRs found:
2025-08-16 00:57:22,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:23,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-16 00:57:23,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:23,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-16 00:57:23,808 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-16 00:57:23,808 [    scc.repo] DEBUG ## Branches found:
2025-08-16 00:57:23,808 [     scc.git] DEBUG Get sha1 of %s
2025-08-16 00:57:23,808 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:23,810 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-16 00:57:23,813 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-16 00:57:23,813 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-16 00:57:23,815 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-16 00:57:23,819 [     scc.git] DEBUG Already up to date.

2025-08-16 00:57:23,819 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-16 00:57:24,098 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-16 00:57:24,098 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-16 00:57:24,102 [     scc.git] DEBUG ## Unique users: []
2025-08-16 00:57:24,102 [     scc.git] DEBUG Get sha1 of %s
2025-08-16 00:57:24,102 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:24,105 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-16 00:57:24,108 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:24,110 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-16 00:57:24,118 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-16 00:57:24,121 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-08-16 00:57:24,121 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-08-16 00:57:24,121 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-08-16 00:57:24,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:24,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-16 00:57:24,294 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-16 00:57:24,334 [     scc.git] DEBUG Get sha1 of %s
2025-08-16 00:57:24,335 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:24,337 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-16 00:57:24,341 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5c273ebb10> has no local changes
2025-08-16 00:57:24,341 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#453 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/453/)'
2025-08-16 00:57:24,348 [     scc.git] DEBUG [detached HEAD 3bd108a] merge master -Dorg -Snone
2025-08-16 00:57:24,348 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-16 00:57:24,348 [   scc.merge] INFO  Already up to date.
2025-08-16 00:57:24,348 [   scc.merge] INFO  
2025-08-16 00:57:24,348 [   scc.merge] INFO  Merged PRs:
2025-08-16 00:57:24,348 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-16 00:57:24,348 [   scc.merge] INFO  
2025-08-16 00:57:24,348 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-16 00:57:24,348 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-08-16 00:57:24,805 [  scc.config] DEBUG Found github.token
2025-08-16 00:57:24,806 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:24,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-16 00:57:25,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:25,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-16 00:57:25,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:25,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-16 00:57:25,859 [      scc.gh] DEBUG 4433 remaining from 5000 (Reset at 01:08
2025-08-16 00:57:25,859 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-16 00:57:25,862 [     scc.git] DEBUG Check current status
2025-08-16 00:57:25,862 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-16 00:57:25,864 [     scc.git] DEBUG 3bd108a merge master -Dorg -Snone
2025-08-16 00:57:25,865 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-16 00:57:25,906 [  scc.config] DEBUG Found remote.origin.url
2025-08-16 00:57:26,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:26,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-16 00:57:26,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:26,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-16 00:57:27,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:27,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-16 00:57:27,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:27,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-16 00:57:28,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:28,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-16 00:57:28,332 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-16 00:57:28,372 [     scc.git] DEBUG Resetting...
2025-08-16 00:57:28,372 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-16 00:57:28,377 [     scc.git] DEBUG HEAD is now at 3bd108a merge master -Dorg -Snone
2025-08-16 00:57:28,377 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-16 00:57:28,417 [     scc.git] DEBUG Check current status
2025-08-16 00:57:28,417 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-16 00:57:28,419 [     scc.git] DEBUG 3bd108a merge master -Dorg -Snone
2025-08-16 00:57:28,419 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-16 00:57:28,457 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-16 00:57:28,457 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-16 00:57:28,457 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-16 00:57:28,457 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-16 00:57:28,457 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-16 00:57:28,457 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-08-16 00:57:28,457 [    scc.repo] DEBUG ## PRs found:
2025-08-16 00:57:28,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:28,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-16 00:57:29,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:29,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-16 00:57:29,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:29,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-16 00:57:30,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:30,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-16 00:57:30,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:30,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-16 00:57:31,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:31,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-16 00:57:31,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:31,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-08-16 00:57:31,937 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-16 00:57:31,937 [    scc.repo] DEBUG ## Branches found:
2025-08-16 00:57:31,937 [     scc.git] DEBUG Get sha1 of %s
2025-08-16 00:57:31,938 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:31,940 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-16 00:57:31,942 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-16 00:57:31,943 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-16 00:57:31,945 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-16 00:57:31,948 [     scc.git] DEBUG Already up to date.

2025-08-16 00:57:31,948 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-16 00:57:32,230 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-16 00:57:32,230 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-16 00:57:32,234 [     scc.git] DEBUG ## Unique users: []
2025-08-16 00:57:32,234 [     scc.git] DEBUG Get sha1 of %s
2025-08-16 00:57:32,234 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:32,236 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-16 00:57:32,239 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:32,241 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-16 00:57:32,245 [     scc.git] DEBUG Already up to date.
2025-08-16 00:57:32,246 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-16 00:57:32,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-16 00:57:32,424 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-16 00:57:32,463 [     scc.git] DEBUG Get sha1 of %s
2025-08-16 00:57:32,463 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-16 00:57:32,465 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-16 00:57:32,505 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-16 00:57:32,509 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f7f8f3f3dd0> has no local changes
2025-08-16 00:57:32,509 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#453 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/453/)'
2025-08-16 00:57:32,516 [     scc.git] DEBUG [detached HEAD 9b88f84] merge master -Dorg -Ssuccess-only
2025-08-16 00:57:32,516 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-16 00:57:32,516 [   scc.merge] INFO  Already up to date.
2025-08-16 00:57:32,516 [   scc.merge] INFO  
2025-08-16 00:57:32,517 [   scc.merge] INFO  Merged PRs:
2025-08-16 00:57:32,517 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-16 00:57:32,517 [   scc.merge] INFO  
2025-08-16 00:57:32,517 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-16 00:57:32,517 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD e9c79d4] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-16 00:57:38,856 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci