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+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-29 01:04:25,924 [  scc.config] DEBUG Found github.token
2025-08-29 01:04:25,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:26,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-29 01:04:26,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:26,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-29 01:04:26,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:27,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-29 01:04:27,020 [      scc.gh] DEBUG 4010 remaining from 5000 (Reset at 01:08
2025-08-29 01:04:27,020 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-29 01:04:27,023 [     scc.git] DEBUG Check current status
2025-08-29 01:04:27,023 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-29 01:04:27,025 [     scc.git] DEBUG 7d4ddff change date
2025-08-29 01:04:27,026 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-29 01:04:27,067 [  scc.config] DEBUG Found remote.origin.url
2025-08-29 01:04:27,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:27,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-29 01:04:27,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:28,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-29 01:04:28,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:28,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-29 01:04:28,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:28,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-29 01:04:29,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:29,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-29 01:04:29,437 [     scc.git] DEBUG Resetting...
2025-08-29 01:04:29,437 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-29 01:04:29,441 [     scc.git] DEBUG HEAD is now at 7d4ddff change date
2025-08-29 01:04:29,442 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-29 01:04:29,483 [     scc.git] DEBUG Check current status
2025-08-29 01:04:29,483 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-29 01:04:29,485 [     scc.git] DEBUG 7d4ddff change date
2025-08-29 01:04:29,485 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-29 01:04:29,525 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-29 01:04:29,525 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-29 01:04:29,525 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-29 01:04:29,525 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-29 01:04:29,526 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-29 01:04:29,526 [    scc.repo] DEBUG ## PRs found:
2025-08-29 01:04:29,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:29,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-29 01:04:30,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:30,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-29 01:04:30,514 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-29 01:04:30,514 [    scc.repo] DEBUG ## Branches found:
2025-08-29 01:04:30,514 [     scc.git] DEBUG Get sha1 of %s
2025-08-29 01:04:30,514 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:30,516 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-29 01:04:30,519 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-29 01:04:30,519 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-29 01:04:30,521 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-29 01:04:30,524 [     scc.git] DEBUG Already up to date.

2025-08-29 01:04:30,524 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-29 01:04:30,801 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-29 01:04:30,801 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-29 01:04:30,805 [     scc.git] DEBUG ## Unique users: []
2025-08-29 01:04:30,806 [     scc.git] DEBUG Get sha1 of %s
2025-08-29 01:04:30,806 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:30,808 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-29 01:04:30,811 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:30,813 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-29 01:04:30,821 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-29 01:04:30,824 [     scc.git] DEBUG  .github/workflows/gradle.yml | 19 ++++++++++++-------
2025-08-29 01:04:30,824 [     scc.git] DEBUG  build.gradle                 |  4 ++--
2025-08-29 01:04:30,825 [     scc.git] DEBUG  2 files changed, 14 insertions(+), 9 deletions(-)
2025-08-29 01:04:30,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:31,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-29 01:04:31,023 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-29 01:04:31,065 [     scc.git] DEBUG Get sha1 of %s
2025-08-29 01:04:31,065 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:31,067 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-29 01:04:31,071 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f25fabd3cd0> has no local changes
2025-08-29 01:04:31,071 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#466 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/466/)'
2025-08-29 01:04:31,078 [     scc.git] DEBUG [detached HEAD 61daae3] merge master -Dorg -Snone
2025-08-29 01:04:31,078 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-29 01:04:31,078 [   scc.merge] INFO  Already up to date.
2025-08-29 01:04:31,078 [   scc.merge] INFO  
2025-08-29 01:04:31,078 [   scc.merge] INFO  Merged PRs:
2025-08-29 01:04:31,078 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-29 01:04:31,078 [   scc.merge] INFO  
2025-08-29 01:04:31,078 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-29 01:04:31,078 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-08-29 01:04:31,528 [  scc.config] DEBUG Found github.token
2025-08-29 01:04:31,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:31,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-29 01:04:31,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:32,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-29 01:04:32,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:32,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-29 01:04:32,623 [      scc.gh] DEBUG 4000 remaining from 5000 (Reset at 01:08
2025-08-29 01:04:32,623 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-29 01:04:32,626 [     scc.git] DEBUG Check current status
2025-08-29 01:04:32,626 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-29 01:04:32,628 [     scc.git] DEBUG 61daae3 merge master -Dorg -Snone
2025-08-29 01:04:32,628 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-29 01:04:32,671 [  scc.config] DEBUG Found remote.origin.url
2025-08-29 01:04:32,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:33,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2025-08-29 01:04:33,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:33,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-29 01:04:33,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:34,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-29 01:04:34,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:34,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-29 01:04:34,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:35,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-29 01:04:35,093 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-29 01:04:35,135 [     scc.git] DEBUG Resetting...
2025-08-29 01:04:35,135 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-29 01:04:35,139 [     scc.git] DEBUG HEAD is now at 61daae3 merge master -Dorg -Snone
2025-08-29 01:04:35,139 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-29 01:04:35,180 [     scc.git] DEBUG Check current status
2025-08-29 01:04:35,180 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-29 01:04:35,182 [     scc.git] DEBUG 61daae3 merge master -Dorg -Snone
2025-08-29 01:04:35,183 [     scc.git] DEBUG Calling 'git submodule status'
2025-08-29 01:04:35,222 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-08-29 01:04:35,222 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-08-29 01:04:35,222 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-08-29 01:04:35,222 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-08-29 01:04:35,222 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-08-29 01:04:35,222 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-08-29 01:04:35,223 [    scc.repo] DEBUG ## PRs found:
2025-08-29 01:04:35,345 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:35,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2025-08-29 01:04:35,876 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:36,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2025-08-29 01:04:36,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:36,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-29 01:04:37,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:37,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-29 01:04:37,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:37,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-29 01:04:38,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:38,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2025-08-29 01:04:38,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:38,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2025-08-29 01:04:38,939 [    scc.repo] DEBUG   - PR 38 jburel 'Update dependency'
2025-08-29 01:04:38,939 [    scc.repo] DEBUG ## Branches found:
2025-08-29 01:04:38,939 [     scc.git] DEBUG Get sha1 of %s
2025-08-29 01:04:38,939 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:38,941 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-29 01:04:38,944 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-29 01:04:38,944 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-29 01:04:38,947 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-29 01:04:38,950 [     scc.git] DEBUG Already up to date.

2025-08-29 01:04:38,950 [     scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2025-08-29 01:04:39,270 [     scc.git] DEBUG From https://github.com/ome/omero-matlab
2025-08-29 01:04:39,270 [     scc.git] DEBUG  * branch            refs/pull/38/head -> FETCH_HEAD
2025-08-29 01:04:39,275 [     scc.git] DEBUG ## Unique users: []
2025-08-29 01:04:39,275 [     scc.git] DEBUG Get sha1 of %s
2025-08-29 01:04:39,275 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:39,277 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-29 01:04:39,280 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:39,282 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2025-08-29 01:04:39,285 [     scc.git] DEBUG Already up to date.
2025-08-29 01:04:39,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-29 01:04:39,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-29 01:04:39,517 [     scc.git] DEBUG Calling 'git submodule update'
2025-08-29 01:04:39,558 [     scc.git] DEBUG Get sha1 of %s
2025-08-29 01:04:39,558 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-29 01:04:39,560 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-29 01:04:39,599 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-08-29 01:04:39,603 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f80b700ed10> has no local changes
2025-08-29 01:04:39,603 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-matlab
Already up to date.

Merged PRs:
  - PR 38 jburel 'Update dependency'

Generated by OMERO-matlab-push#466 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-matlab-push/466/)'
2025-08-29 01:04:39,610 [     scc.git] DEBUG [detached HEAD 4cb90b1] merge master -Dorg -Ssuccess-only
2025-08-29 01:04:39,610 [   scc.merge] INFO  Repository: ome/omero-matlab
2025-08-29 01:04:39,610 [   scc.merge] INFO  Already up to date.
2025-08-29 01:04:39,610 [   scc.merge] INFO  
2025-08-29 01:04:39,610 [   scc.merge] INFO  Merged PRs:
2025-08-29 01:04:39,610 [   scc.merge] INFO    - PR 38 jburel 'Update dependency'
2025-08-29 01:04:39,610 [   scc.merge] INFO  
2025-08-29 01:04:39,611 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-29 01:04:39,611 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.4-SNAPSHOT
Commit all component version changes
[detached HEAD c900a65] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-29 01:04:45,993 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci