Console Output
+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-03-02 00:57:54,528 [ scc.config] DEBUG Found github.token
2026-03-02 00:57:54,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-03-02 00:57:54,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-02 00:57:55,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-02 00:57:55,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-03-02 00:57:55,515 [ scc.gh] DEBUG 4117 remaining from 5000 (Reset at 01:03
2026-03-02 00:57:55,515 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-03-02 00:57:55,518 [ scc.git] DEBUG Check current status
2026-03-02 00:57:55,518 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-02 00:57:55,520 [ scc.git] DEBUG 7d4ddff change date
2026-03-02 00:57:55,520 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-02 00:57:55,560 [ scc.config] DEBUG Found remote.origin.url
2026-03-02 00:57:56,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-03-02 00:57:56,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-03-02 00:57:56,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-03-02 00:57:57,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-03-02 00:57:57,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-03-02 00:57:57,784 [ scc.git] DEBUG Resetting...
2026-03-02 00:57:57,784 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-03-02 00:57:57,788 [ scc.git] DEBUG HEAD is now at 7d4ddff change date
2026-03-02 00:57:57,788 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-03-02 00:57:57,826 [ scc.git] DEBUG Check current status
2026-03-02 00:57:57,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-02 00:57:57,828 [ scc.git] DEBUG 7d4ddff change date
2026-03-02 00:57:57,828 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-02 00:57:57,866 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-03-02 00:57:57,866 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-03-02 00:57:57,866 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-03-02 00:57:57,866 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-03-02 00:57:57,866 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-03-02 00:57:57,866 [ scc.repo] DEBUG ## PRs found:
2026-03-02 00:57:58,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-03-02 00:57:58,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-03-02 00:57:58,803 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-03-02 00:57:58,803 [ scc.repo] DEBUG ## Branches found:
2026-03-02 00:57:58,803 [ scc.git] DEBUG Get sha1 of %s
2026-03-02 00:57:58,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:57:58,805 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-03-02 00:57:58,807 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-03-02 00:57:58,807 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-03-02 00:57:58,810 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-03-02 00:57:58,812 [ scc.git] DEBUG Already up to date.
2026-03-02 00:57:58,812 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-03-02 00:57:59,085 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-03-02 00:57:59,085 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-03-02 00:57:59,089 [ scc.git] DEBUG ## Unique users: []
2026-03-02 00:57:59,089 [ scc.git] DEBUG Get sha1 of %s
2026-03-02 00:57:59,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:57:59,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-02 00:57:59,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:57:59,095 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-02 00:57:59,102 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-03-02 00:57:59,104 [ scc.git] DEBUG .github/workflows/gradle.yml | 19 ++++++++++++-------
2026-03-02 00:57:59,105 [ scc.git] DEBUG build.gradle | 4 ++--
2026-03-02 00:57:59,105 [ scc.git] DEBUG 2 files changed, 14 insertions(+), 9 deletions(-)
2026-03-02 00:57:59,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-02 00:57:59,260 [ scc.git] DEBUG Calling 'git submodule update'
2026-03-02 00:57:59,297 [ scc.git] DEBUG Get sha1 of %s
2026-03-02 00:57:59,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:57:59,299 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-03-02 00:57:59,302 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f549276f0d0> has no local changes
2026-03-02 00:57:59,303 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#62 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/62/)'
2026-03-02 00:57:59,308 [ scc.git] DEBUG [detached HEAD 5bcf786] merge master -Dorg -Snone
2026-03-02 00:57:59,308 [ scc.merge] INFO Repository: ome/omero-matlab
2026-03-02 00:57:59,309 [ scc.merge] INFO Already up to date.
2026-03-02 00:57:59,309 [ scc.merge] INFO
2026-03-02 00:57:59,309 [ scc.merge] INFO Merged PRs:
2026-03-02 00:57:59,309 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-03-02 00:57:59,309 [ scc.merge] INFO
2026-03-02 00:57:59,309 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-03-02 00:57:59,309 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2026-03-02 00:57:59,721 [ scc.config] DEBUG Found github.token
2026-03-02 00:57:59,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-03-02 00:57:59,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-02 00:58:00,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-02 00:58:00,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-03-02 00:58:00,690 [ scc.gh] DEBUG 4108 remaining from 5000 (Reset at 01:03
2026-03-02 00:58:00,691 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-03-02 00:58:00,693 [ scc.git] DEBUG Check current status
2026-03-02 00:58:00,693 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-02 00:58:00,696 [ scc.git] DEBUG 5bcf786 merge master -Dorg -Snone
2026-03-02 00:58:00,696 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-02 00:58:00,734 [ scc.config] DEBUG Found remote.origin.url
2026-03-02 00:58:01,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-03-02 00:58:01,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-03-02 00:58:02,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-03-02 00:58:02,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-03-02 00:58:02,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-03-02 00:58:02,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-03-02 00:58:02,945 [ scc.git] DEBUG Resetting...
2026-03-02 00:58:02,946 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-03-02 00:58:02,949 [ scc.git] DEBUG HEAD is now at 5bcf786 merge master -Dorg -Snone
2026-03-02 00:58:02,949 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-03-02 00:58:02,986 [ scc.git] DEBUG Check current status
2026-03-02 00:58:02,987 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-02 00:58:02,989 [ scc.git] DEBUG 5bcf786 merge master -Dorg -Snone
2026-03-02 00:58:02,989 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-02 00:58:03,025 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-03-02 00:58:03,025 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-03-02 00:58:03,025 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-03-02 00:58:03,025 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-03-02 00:58:03,025 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-03-02 00:58:03,025 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-03-02 00:58:03,025 [ scc.repo] DEBUG ## PRs found:
2026-03-02 00:58:03,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-03-02 00:58:03,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-03-02 00:58:04,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-03-02 00:58:04,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-03-02 00:58:05,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-03-02 00:58:05,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-03-02 00:58:06,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2026-03-02 00:58:06,329 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-03-02 00:58:06,329 [ scc.repo] DEBUG ## Branches found:
2026-03-02 00:58:06,329 [ scc.git] DEBUG Get sha1 of %s
2026-03-02 00:58:06,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:58:06,332 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-03-02 00:58:06,334 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-03-02 00:58:06,334 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-03-02 00:58:06,336 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-03-02 00:58:06,339 [ scc.git] DEBUG Already up to date.
2026-03-02 00:58:06,339 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-03-02 00:58:06,598 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-03-02 00:58:06,598 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-03-02 00:58:06,602 [ scc.git] DEBUG ## Unique users: []
2026-03-02 00:58:06,602 [ scc.git] DEBUG Get sha1 of %s
2026-03-02 00:58:06,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:58:06,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-02 00:58:06,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:58:06,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-02 00:58:06,612 [ scc.git] DEBUG Already up to date.
2026-03-02 00:58:06,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-02 00:58:06,757 [ scc.git] DEBUG Calling 'git submodule update'
2026-03-02 00:58:06,794 [ scc.git] DEBUG Get sha1 of %s
2026-03-02 00:58:06,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-02 00:58:06,796 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-03-02 00:58:06,831 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-03-02 00:58:06,834 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2ee6322c10> has no local changes
2026-03-02 00:58:06,834 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#62 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/62/)'
2026-03-02 00:58:06,840 [ scc.git] DEBUG [detached HEAD 06f8a63] merge master -Dorg -Ssuccess-only
2026-03-02 00:58:06,841 [ scc.merge] INFO Repository: ome/omero-matlab
2026-03-02 00:58:06,841 [ scc.merge] INFO Already up to date.
2026-03-02 00:58:06,841 [ scc.merge] INFO
2026-03-02 00:58:06,841 [ scc.merge] INFO Merged PRs:
2026-03-02 00:58:06,841 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-03-02 00:58:06,841 [ scc.merge] INFO
2026-03-02 00:58:06,841 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-03-02 00:58:06,841 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.6-SNAPSHOT
Commit all component version changes
[detached HEAD 3ffbc03] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2026-03-02 00:58:12,991 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci
