Console Output
+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-03-03 00:59:01,236 [ scc.config] DEBUG Found github.token
2026-03-03 00:59:01,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-03-03 00:59:01,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-03 00:59:01,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-03 00:59:02,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-03-03 00:59:02,210 [ scc.gh] DEBUG 2826 remaining from 5000 (Reset at 00:03
2026-03-03 00:59:02,211 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-03-03 00:59:02,213 [ scc.git] DEBUG Check current status
2026-03-03 00:59:02,213 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-03 00:59:02,215 [ scc.git] DEBUG 7d4ddff change date
2026-03-03 00:59:02,216 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-03 00:59:02,256 [ scc.config] DEBUG Found remote.origin.url
2026-03-03 00:59:02,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-03-03 00:59:03,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-03-03 00:59:03,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-03-03 00:59:04,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-03-03 00:59:04,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-03-03 00:59:04,484 [ scc.git] DEBUG Resetting...
2026-03-03 00:59:04,484 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-03-03 00:59:04,488 [ scc.git] DEBUG HEAD is now at 7d4ddff change date
2026-03-03 00:59:04,488 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-03-03 00:59:04,525 [ scc.git] DEBUG Check current status
2026-03-03 00:59:04,526 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-03 00:59:04,528 [ scc.git] DEBUG 7d4ddff change date
2026-03-03 00:59:04,528 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-03 00:59:04,565 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-03-03 00:59:04,565 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-03-03 00:59:04,565 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-03-03 00:59:04,565 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-03-03 00:59:04,565 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-03-03 00:59:04,565 [ scc.repo] DEBUG ## PRs found:
2026-03-03 00:59:05,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-03-03 00:59:05,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-03-03 00:59:05,524 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-03-03 00:59:05,524 [ scc.repo] DEBUG ## Branches found:
2026-03-03 00:59:05,524 [ scc.git] DEBUG Get sha1 of %s
2026-03-03 00:59:05,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:05,527 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-03-03 00:59:05,529 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-03-03 00:59:05,529 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-03-03 00:59:05,531 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-03-03 00:59:05,534 [ scc.git] DEBUG Already up to date.
2026-03-03 00:59:05,534 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-03-03 00:59:05,811 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-03-03 00:59:05,811 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-03-03 00:59:05,815 [ scc.git] DEBUG ## Unique users: []
2026-03-03 00:59:05,815 [ scc.git] DEBUG Get sha1 of %s
2026-03-03 00:59:05,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:05,818 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-03 00:59:05,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:05,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-03 00:59:05,830 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-03-03 00:59:05,832 [ scc.git] DEBUG .github/workflows/gradle.yml | 19 ++++++++++++-------
2026-03-03 00:59:05,832 [ scc.git] DEBUG build.gradle | 4 ++--
2026-03-03 00:59:05,832 [ scc.git] DEBUG 2 files changed, 14 insertions(+), 9 deletions(-)
2026-03-03 00:59:06,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-03 00:59:06,005 [ scc.git] DEBUG Calling 'git submodule update'
2026-03-03 00:59:06,043 [ scc.git] DEBUG Get sha1 of %s
2026-03-03 00:59:06,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:06,045 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-03-03 00:59:06,049 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbf1785f310> has no local changes
2026-03-03 00:59:06,049 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#63 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/63/)'
2026-03-03 00:59:06,054 [ scc.git] DEBUG [detached HEAD c7bead4] merge master -Dorg -Snone
2026-03-03 00:59:06,055 [ scc.merge] INFO Repository: ome/omero-matlab
2026-03-03 00:59:06,055 [ scc.merge] INFO Already up to date.
2026-03-03 00:59:06,055 [ scc.merge] INFO
2026-03-03 00:59:06,055 [ scc.merge] INFO Merged PRs:
2026-03-03 00:59:06,055 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-03-03 00:59:06,055 [ scc.merge] INFO
2026-03-03 00:59:06,055 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-03-03 00:59:06,055 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2026-03-03 00:59:06,465 [ scc.config] DEBUG Found github.token
2026-03-03 00:59:06,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-03-03 00:59:06,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-03 00:59:07,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-03 00:59:07,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-03-03 00:59:07,453 [ scc.gh] DEBUG 2817 remaining from 5000 (Reset at 00:03
2026-03-03 00:59:07,454 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-03-03 00:59:07,456 [ scc.git] DEBUG Check current status
2026-03-03 00:59:07,456 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-03 00:59:07,459 [ scc.git] DEBUG c7bead4 merge master -Dorg -Snone
2026-03-03 00:59:07,459 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-03 00:59:07,500 [ scc.config] DEBUG Found remote.origin.url
2026-03-03 00:59:07,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-03-03 00:59:08,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-03-03 00:59:08,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-03-03 00:59:09,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-03-03 00:59:09,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-03-03 00:59:09,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-03-03 00:59:09,755 [ scc.git] DEBUG Resetting...
2026-03-03 00:59:09,755 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-03-03 00:59:09,759 [ scc.git] DEBUG HEAD is now at c7bead4 merge master -Dorg -Snone
2026-03-03 00:59:09,759 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-03-03 00:59:09,796 [ scc.git] DEBUG Check current status
2026-03-03 00:59:09,796 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-03 00:59:09,798 [ scc.git] DEBUG c7bead4 merge master -Dorg -Snone
2026-03-03 00:59:09,799 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-03 00:59:09,835 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-03-03 00:59:09,836 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-03-03 00:59:09,836 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-03-03 00:59:09,836 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-03-03 00:59:09,836 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-03-03 00:59:09,836 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-03-03 00:59:09,836 [ scc.repo] DEBUG ## PRs found:
2026-03-03 00:59:10,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-03-03 00:59:10,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-03-03 00:59:11,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-03-03 00:59:11,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-03-03 00:59:12,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-03-03 00:59:12,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-03-03 00:59:13,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2026-03-03 00:59:13,076 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-03-03 00:59:13,076 [ scc.repo] DEBUG ## Branches found:
2026-03-03 00:59:13,076 [ scc.git] DEBUG Get sha1 of %s
2026-03-03 00:59:13,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:13,079 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-03-03 00:59:13,081 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-03-03 00:59:13,081 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-03-03 00:59:13,083 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-03-03 00:59:13,086 [ scc.git] DEBUG Already up to date.
2026-03-03 00:59:13,086 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-03-03 00:59:13,534 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-03-03 00:59:13,534 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-03-03 00:59:13,538 [ scc.git] DEBUG ## Unique users: []
2026-03-03 00:59:13,538 [ scc.git] DEBUG Get sha1 of %s
2026-03-03 00:59:13,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:13,540 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-03 00:59:13,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:13,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-03 00:59:13,547 [ scc.git] DEBUG Already up to date.
2026-03-03 00:59:13,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-03 00:59:13,692 [ scc.git] DEBUG Calling 'git submodule update'
2026-03-03 00:59:13,728 [ scc.git] DEBUG Get sha1 of %s
2026-03-03 00:59:13,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-03 00:59:13,731 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-03-03 00:59:13,768 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-03-03 00:59:13,771 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f986013b7d0> has no local changes
2026-03-03 00:59:13,771 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#63 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/63/)'
2026-03-03 00:59:13,777 [ scc.git] DEBUG [detached HEAD a2bb6be] merge master -Dorg -Ssuccess-only
2026-03-03 00:59:13,777 [ scc.merge] INFO Repository: ome/omero-matlab
2026-03-03 00:59:13,778 [ scc.merge] INFO Already up to date.
2026-03-03 00:59:13,778 [ scc.merge] INFO
2026-03-03 00:59:13,778 [ scc.merge] INFO Merged PRs:
2026-03-03 00:59:13,778 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-03-03 00:59:13,778 [ scc.merge] INFO
2026-03-03 00:59:13,778 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-03-03 00:59:13,778 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.6-SNAPSHOT
Commit all component version changes
[detached HEAD 13212fe] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2026-03-03 00:59:19,688 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci
