Console Output
+ export BASE_REPO=omero-matlab.git
+ BASE_REPO=omero-matlab.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-matlab-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-matlab-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-matlab-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-03-09 00:57:39,680 [ scc.config] DEBUG Found github.token
2026-03-09 00:57:39,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-03-09 00:57:39,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-09 00:57:40,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-09 00:57:40,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-03-09 00:57:40,842 [ scc.gh] DEBUG 3741 remaining from 5000 (Reset at 01:03
2026-03-09 00:57:40,843 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-03-09 00:57:40,845 [ scc.git] DEBUG Check current status
2026-03-09 00:57:40,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-09 00:57:40,848 [ scc.git] DEBUG 7d4ddff change date
2026-03-09 00:57:40,848 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-09 00:57:40,888 [ scc.config] DEBUG Found remote.origin.url
2026-03-09 00:57:41,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-03-09 00:57:41,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-03-09 00:57:42,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-03-09 00:57:42,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-03-09 00:57:43,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-03-09 00:57:43,065 [ scc.git] DEBUG Resetting...
2026-03-09 00:57:43,065 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-03-09 00:57:43,069 [ scc.git] DEBUG HEAD is now at 7d4ddff change date
2026-03-09 00:57:43,069 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-03-09 00:57:43,106 [ scc.git] DEBUG Check current status
2026-03-09 00:57:43,106 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-09 00:57:43,108 [ scc.git] DEBUG 7d4ddff change date
2026-03-09 00:57:43,109 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-09 00:57:43,146 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-03-09 00:57:43,146 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-03-09 00:57:43,146 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-03-09 00:57:43,146 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-03-09 00:57:43,146 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-03-09 00:57:43,146 [ scc.repo] DEBUG ## PRs found:
2026-03-09 00:57:43,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-03-09 00:57:44,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-03-09 00:57:44,125 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-03-09 00:57:44,125 [ scc.repo] DEBUG ## Branches found:
2026-03-09 00:57:44,125 [ scc.git] DEBUG Get sha1 of %s
2026-03-09 00:57:44,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:44,128 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-03-09 00:57:44,130 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-03-09 00:57:44,130 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-03-09 00:57:44,132 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-03-09 00:57:44,135 [ scc.git] DEBUG Already up to date.
2026-03-09 00:57:44,135 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-03-09 00:57:44,541 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-03-09 00:57:44,541 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-03-09 00:57:44,544 [ scc.git] DEBUG ## Unique users: []
2026-03-09 00:57:44,545 [ scc.git] DEBUG Get sha1 of %s
2026-03-09 00:57:44,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:44,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-09 00:57:44,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:44,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-09 00:57:44,558 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-03-09 00:57:44,561 [ scc.git] DEBUG .github/workflows/gradle.yml | 19 ++++++++++++-------
2026-03-09 00:57:44,561 [ scc.git] DEBUG build.gradle | 4 ++--
2026-03-09 00:57:44,561 [ scc.git] DEBUG 2 files changed, 14 insertions(+), 9 deletions(-)
2026-03-09 00:57:44,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-09 00:57:44,717 [ scc.git] DEBUG Calling 'git submodule update'
2026-03-09 00:57:44,755 [ scc.git] DEBUG Get sha1 of %s
2026-03-09 00:57:44,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:44,757 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-03-09 00:57:44,760 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcc58ee2fd0> has no local changes
2026-03-09 00:57:44,760 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#69 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/69/)'
2026-03-09 00:57:44,767 [ scc.git] DEBUG [detached HEAD c29f42f] merge master -Dorg -Snone
2026-03-09 00:57:44,767 [ scc.merge] INFO Repository: ome/omero-matlab
2026-03-09 00:57:44,767 [ scc.merge] INFO Already up to date.
2026-03-09 00:57:44,767 [ scc.merge] INFO
2026-03-09 00:57:44,767 [ scc.merge] INFO Merged PRs:
2026-03-09 00:57:44,767 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-03-09 00:57:44,767 [ scc.merge] INFO
2026-03-09 00:57:44,767 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-03-09 00:57:44,767 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2026-03-09 00:57:45,183 [ scc.config] DEBUG Found github.token
2026-03-09 00:57:45,185 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-03-09 00:57:45,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-09 00:57:45,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-09 00:57:46,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-03-09 00:57:46,213 [ scc.gh] DEBUG 3732 remaining from 5000 (Reset at 01:03
2026-03-09 00:57:46,213 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-03-09 00:57:46,216 [ scc.git] DEBUG Check current status
2026-03-09 00:57:46,216 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-09 00:57:46,218 [ scc.git] DEBUG c29f42f merge master -Dorg -Snone
2026-03-09 00:57:46,218 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-09 00:57:46,258 [ scc.config] DEBUG Found remote.origin.url
2026-03-09 00:57:46,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab HTTP/1.1" 200 None
2026-03-09 00:57:47,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-03-09 00:57:47,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-03-09 00:57:48,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-03-09 00:57:48,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-03-09 00:57:48,472 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-03-09 00:57:48,510 [ scc.git] DEBUG Resetting...
2026-03-09 00:57:48,510 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-03-09 00:57:48,514 [ scc.git] DEBUG HEAD is now at c29f42f merge master -Dorg -Snone
2026-03-09 00:57:48,514 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-03-09 00:57:48,550 [ scc.git] DEBUG Check current status
2026-03-09 00:57:48,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-03-09 00:57:48,552 [ scc.git] DEBUG c29f42f merge master -Dorg -Snone
2026-03-09 00:57:48,552 [ scc.git] DEBUG Calling 'git submodule status'
2026-03-09 00:57:48,587 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-03-09 00:57:48,587 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-03-09 00:57:48,587 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-03-09 00:57:48,587 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-03-09 00:57:48,588 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-03-09 00:57:48,588 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-03-09 00:57:48,588 [ scc.repo] DEBUG ## PRs found:
2026-03-09 00:57:49,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/pulls HTTP/1.1" 200 None
2026-03-09 00:57:49,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/issues/38 HTTP/1.1" 200 None
2026-03-09 00:57:50,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-03-09 00:57:50,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-03-09 00:57:51,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-03-09 00:57:51,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/commits/a8d38c69bde53075007fff870c8bb5f671b87737 HTTP/1.1" 200 None
2026-03-09 00:57:51,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-matlab/statuses/a8d38c69bde53075007fff870c8bb5f671b87737?per_page=1 HTTP/1.1" 200 2
2026-03-09 00:57:51,964 [ scc.repo] DEBUG - PR 38 jburel 'Update dependency'
2026-03-09 00:57:51,964 [ scc.repo] DEBUG ## Branches found:
2026-03-09 00:57:51,964 [ scc.git] DEBUG Get sha1 of %s
2026-03-09 00:57:51,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:51,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-03-09 00:57:51,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-03-09 00:57:51,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-03-09 00:57:51,971 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-03-09 00:57:51,974 [ scc.git] DEBUG Already up to date.
2026-03-09 00:57:51,974 [ scc.git] DEBUG Calling 'git fetch origin pull/38/head'
2026-03-09 00:57:52,353 [ scc.git] DEBUG From https://github.com/ome/omero-matlab
2026-03-09 00:57:52,354 [ scc.git] DEBUG * branch refs/pull/38/head -> FETCH_HEAD
2026-03-09 00:57:52,358 [ scc.git] DEBUG ## Unique users: []
2026-03-09 00:57:52,358 [ scc.git] DEBUG Get sha1 of %s
2026-03-09 00:57:52,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:52,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-09 00:57:52,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:52,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 38 (Update dependency) a8d38c69bde53075007fff870c8bb5f671b87737'
2026-03-09 00:57:52,368 [ scc.git] DEBUG Already up to date.
2026-03-09 00:57:52,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-03-09 00:57:52,510 [ scc.git] DEBUG Calling 'git submodule update'
2026-03-09 00:57:52,548 [ scc.git] DEBUG Get sha1 of %s
2026-03-09 00:57:52,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-03-09 00:57:52,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-03-09 00:57:52,587 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-03-09 00:57:52,590 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f20cddd6fd0> has no local changes
2026-03-09 00:57:52,590 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-matlab
Already up to date.
Merged PRs:
- PR 38 jburel 'Update dependency'
Generated by OMERO-matlab-push#69 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-matlab-push/69/)'
2026-03-09 00:57:52,595 [ scc.git] DEBUG [detached HEAD d1664ae] merge master -Dorg -Ssuccess-only
2026-03-09 00:57:52,596 [ scc.merge] INFO Repository: ome/omero-matlab
2026-03-09 00:57:52,596 [ scc.merge] INFO Already up to date.
2026-03-09 00:57:52,596 [ scc.merge] INFO
2026-03-09 00:57:52,596 [ scc.merge] INFO Merged PRs:
2026-03-09 00:57:52,596 [ scc.merge] INFO - PR 38 jburel 'Update dependency'
2026-03-09 00:57:52,596 [ scc.merge] INFO
2026-03-09 00:57:52,596 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-03-09 00:57:52,596 [ scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.10.1 to 5.10.6-SNAPSHOT
Commit all component version changes
[detached HEAD 43c907a] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
2026-03-09 00:57:58,384 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-matlab/tree/merge_ci
